FFCP PHASE1:Hg19::chr13:40177261..40177339,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10186 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6586 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y693 | |||
|association_with_transcript=0bp_to_ENST00000379589_5end | |||
|coexpression_cluster_id=C3371 | |||
|description=CAGE_peak_1_at_LHFP_5end | |||
|id=chr13:40177261..40177339,- | |||
|ontology_enrichment_celltype=CL:0000055!2.11e-12!180;CL:0000057!1.87e-11!75;CL:0000136!1.06e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.07e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.37e-12,76;CL:0000136,9.63e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-18!115;UBERON:0000468!2.67e-15!659;UBERON:0000924!1.05e-14!173;UBERON:0006601!1.05e-14!173;UBERON:0000475!1.93e-14!365;UBERON:0004121!5.43e-14!169;UBERON:0000073!1.61e-12!94;UBERON:0001016!1.61e-12!94;UBERON:0005743!2.00e-12!86;UBERON:0001017!2.64e-12!82;UBERON:0002616!5.29e-12!59;UBERON:0000033!2.22e-11!123;UBERON:0001049!2.54e-11!57;UBERON:0005068!2.54e-11!57;UBERON:0006241!2.54e-11!57;UBERON:0007135!2.54e-11!57;UBERON:0000467!2.71e-11!625;UBERON:0000480!3.18e-11!626;UBERON:0000153!4.99e-11!129;UBERON:0007811!4.99e-11!129;UBERON:0000955!8.59e-11!69;UBERON:0006238!8.59e-11!69;UBERON:0002346!1.04e-10!90;UBERON:0003075!4.98e-10!86;UBERON:0007284!4.98e-10!86;UBERON:0000481!8.75e-10!347;UBERON:0000477!6.79e-09!286;UBERON:0004923!1.10e-08!57;UBERON:0000064!1.26e-08!219;UBERON:0000119!1.54e-08!312;UBERON:0000483!6.43e-08!309;UBERON:0002050!1.04e-07!605;UBERON:0005423!1.04e-07!605;UBERON:0000922!1.36e-07!612;UBERON:0000923!1.93e-07!604;UBERON:0005291!1.93e-07!604;UBERON:0006598!1.93e-07!604;UBERON:0002532!1.93e-07!604;UBERON:0000062!2.13e-07!511;UBERON:0004111!2.72e-07!241;UBERON:0003080!4.03e-07!42;UBERON:0003102!4.30e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.08e-18,114;UBERON:0004121,1.21e-15,171;UBERON:0000924,1.21e-15,171;UBERON:0006601,1.21e-15,171;UBERON:0010314,2.19e-15,132;UBERON:0001016,4.91e-12,89;UBERON:0001017,6.76e-12,81;UBERON:0002346,3.95e-11,86;UBERON:0001049,7.18e-11,56;UBERON:0005068,7.18e-11,56;UBERON:0006241,7.18e-11,56;UBERON:0007135,7.18e-11,56;UBERON:0003075,1.95e-10,82;UBERON:0007284,1.95e-10,82;UBERON:0000955,2.24e-10,68;UBERON:0006238,2.24e-10,68;UBERON:0004923,5.53e-10,66;UBERON:0000073,1.09e-09,53;UBERON:0002616,1.09e-09,53;UBERON:0010371,2.35e-09,104;UBERON:0000119,6.99e-09,309;UBERON:0000483,3.04e-08,306;UBERON:0011216,4.23e-08,223;UBERON:0002050,1.72e-07,564;UBERON:0003102,2.53e-07,99;UBERON:0000923,3.51e-07,560;UBERON:0010316,3.51e-07,560;UBERON:0005291,3.51e-07,560;UBERON:0006598,3.51e-07,560;UBERON:0010317,3.51e-07,560;UBERON:0002532,3.51e-07,560;UBERON:0004111,5.34e-07,240 | |||
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| |||
|short_description=p1@LHFP | |||
}} |
Revision as of 17:25, 11 January 2014
Short description: | p1@LHFP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LHFP_5end |
Coexpression cluster: | C3371_normal_left_heart_lung_diaphragm_aorta_tenocyte |
Association with transcript: | 0bp_to_ENST00000379589_5end |
EntrezGene: | LHFP |
HGNC: | 6586 |
UniProt: | Q9Y693 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.37e-12 | 76 |
fat cell | 9.63e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.08e-18 | 114 |
ectoderm-derived structure | 1.21e-15 | 171 |
ectoderm | 1.21e-15 | 171 |
presumptive ectoderm | 1.21e-15 | 171 |
structure with developmental contribution from neural crest | 2.19e-15 | 132 |
nervous system | 4.91e-12 | 89 |
central nervous system | 6.76e-12 | 81 |
neurectoderm | 3.95e-11 | 86 |
neural tube | 7.18e-11 | 56 |
neural rod | 7.18e-11 | 56 |
future spinal cord | 7.18e-11 | 56 |
neural keel | 7.18e-11 | 56 |
neural plate | 1.95e-10 | 82 |
presumptive neural plate | 1.95e-10 | 82 |
brain | 2.24e-10 | 68 |
future brain | 2.24e-10 | 68 |
organ component layer | 5.53e-10 | 66 |
regional part of nervous system | 1.09e-09 | 53 |
regional part of brain | 1.09e-09 | 53 |
ecto-epithelium | 2.35e-09 | 104 |
cell layer | 6.99e-09 | 309 |
epithelium | 3.04e-08 | 306 |
organ system subdivision | 4.23e-08 | 223 |
embryonic structure | 1.72e-07 | 564 |
surface structure | 2.53e-07 | 99 |
germ layer | 3.51e-07 | 560 |
germ layer / neural crest | 3.51e-07 | 560 |
embryonic tissue | 3.51e-07 | 560 |
presumptive structure | 3.51e-07 | 560 |
germ layer / neural crest derived structure | 3.51e-07 | 560 |
epiblast (generic) | 3.51e-07 | 560 |
anatomical conduit | 5.34e-07 | 240 |