FFCP PHASE1:Hg19::chr4:159091792..159091884,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51313 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25312 | |||
|TSSclassifier=strong | |||
|UniProt=B4E252,Q9NYZ0,Q6UWH4 | |||
|association_with_transcript=0bp_to_AK304112,BC017701,BC100016_5end | |||
|description=CAGE_peak_3_at_FAM198B_5end | |||
|id=chr4:159091792..159091884,- | |||
|ontology_enrichment_celltype=CL:0002057!3.75e-25!42;CL:0002194!3.32e-23!63;CL:0000576!3.32e-23!63;CL:0000040!3.32e-23!63;CL:0000559!3.32e-23!63;CL:0002009!5.24e-22!65;CL:0000860!1.05e-21!45;CL:0000839!8.90e-20!70;CL:0000557!4.56e-18!71;CL:0000766!2.79e-17!76;CL:0002139!1.43e-10!24;CL:0000115!2.65e-10!35;CL:0000071!9.67e-08!18;CL:0002546!9.67e-08!18;CL:0002078!5.81e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.93e-21;39!CL:0000234;1.93e-21;39!CL:0000860;1.01e-20;33!CL:0002057;1.01e-20;33!CL:0000576;1.62e-17;48!CL:0002139;1.59e-11;24!CL:0000766;2.72e-11;69!CL:0000115;3.26e-10;36!CL:0000071;2.04e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.73e-33,48;CL:0000234,8.73e-33,48;CL:0002194,1.20e-30,59;CL:0000576,1.20e-30,59;CL:0000040,1.20e-30,59;CL:0000559,1.20e-30,59;CL:0002009,1.01e-28,61;CL:0000860,7.80e-28,42;CL:0002057,7.80e-28,42;CL:0000839,4.93e-26,66;CL:0000557,1.04e-23,67;CL:0000766,2.66e-23,72;CL:0000115,8.30e-12,36;CL:0002139,1.36e-11,24;CL:0000763,1.86e-09,108;CL:0000049,1.86e-09,108;CL:0000071,1.92e-08,18;CL:0002546,1.92e-08,18;CL:0002078,3.26e-08,45;CL:0002087,4.62e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.93e-20;42!CL:0002546;2.04e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.02e-28!115;UBERON:0000468!9.86e-21!659;UBERON:0000467!9.37e-18!625;UBERON:0000480!1.63e-17!626;UBERON:0002193!8.25e-17!112;UBERON:0000922!4.58e-16!612;UBERON:0002050!1.87e-15!605;UBERON:0005423!1.87e-15!605;UBERON:0000923!3.16e-15!604;UBERON:0005291!3.16e-15!604;UBERON:0006598!3.16e-15!604;UBERON:0002532!3.16e-15!604;UBERON:0002371!3.59e-15!80;UBERON:0002405!3.84e-15!115;UBERON:0002390!4.08e-15!102;UBERON:0003061!4.08e-15!102;UBERON:0003081!3.42e-14!216;UBERON:0001474!7.70e-13!86;UBERON:0000062!7.32e-12!511;UBERON:0001049!1.21e-11!57;UBERON:0005068!1.21e-11!57;UBERON:0006241!1.21e-11!57;UBERON:0007135!1.21e-11!57;UBERON:0000926!6.11e-11!448;UBERON:0004120!6.11e-11!448;UBERON:0006603!6.11e-11!448;UBERON:0002616!2.46e-10!59;UBERON:0000955!3.19e-10!69;UBERON:0006238!3.19e-10!69;UBERON:0004765!9.18e-10!101;UBERON:0001434!9.18e-10!101;UBERON:0003080!2.63e-09!42;UBERON:0002780!5.94e-09!41;UBERON:0001890!5.94e-09!41;UBERON:0006240!5.94e-09!41;UBERON:0002020!2.11e-08!34;UBERON:0003528!2.11e-08!34;UBERON:0001017!2.43e-08!82;UBERON:0001893!4.03e-08!34;UBERON:0002791!8.52e-08!33;UBERON:0001869!9.64e-08!32;UBERON:0001986!9.67e-08!18;UBERON:0004638!9.67e-08!18;UBERON:0004852!9.67e-08!18;UBERON:0005743!1.89e-07!86;UBERON:0002619!2.15e-07!22;UBERON:0003075!9.52e-07!86;UBERON:0007284!9.52e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.04e-08;18!UBERON:0001986;2.04e-08;18!UBERON:0004852;2.04e-08;18!UBERON:0007023;5.08e-08;114!UBERON:0002619;7.63e-08;22!UBERON:0003528;1.39e-07;34!UBERON:0002020;1.39e-07;34!UBERON:0001893;2.27e-07;34!UBERON:0001869;2.28e-07;32!UBERON:0002791;2.78e-07;32!UBERON:0000487;8.98e-07;22!UBERON:0001950;9.32e-07;20!UBERON:0002780;9.84e-07;41!UBERON:0001890;9.84e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.06e-28,114;UBERON:0002193,7.30e-21,108;UBERON:0002371,7.17e-20,76;UBERON:0002390,3.55e-19,98;UBERON:0003061,3.55e-19,98;UBERON:0002405,3.85e-19,93;UBERON:0000926,9.91e-19,315;UBERON:0004120,9.91e-19,315;UBERON:0006603,9.91e-19,315;UBERON:0003081,5.73e-18,203;UBERON:0002050,1.03e-17,564;UBERON:0000923,1.55e-17,560;UBERON:0010316,1.55e-17,560;UBERON:0005291,1.55e-17,560;UBERON:0006598,1.55e-17,560;UBERON:0010317,1.55e-17,560;UBERON:0002532,1.55e-17,560;UBERON:0001474,1.47e-16,82;UBERON:0005423,3.74e-16,581;UBERON:0000922,3.67e-15,592;UBERON:0004765,1.13e-13,90;UBERON:0001049,5.28e-12,56;UBERON:0005068,5.28e-12,56;UBERON:0006241,5.28e-12,56;UBERON:0007135,5.28e-12,56;UBERON:0001434,3.09e-11,100;UBERON:0000073,3.64e-11,53;UBERON:0002616,3.64e-11,53;UBERON:0000955,2.95e-09,68;UBERON:0006238,2.95e-09,68;UBERON:0002780,4.10e-09,41;UBERON:0001890,4.10e-09,41;UBERON:0003080,4.10e-09,41;UBERON:0006240,4.10e-09,41;UBERON:0003528,7.17e-09,34;UBERON:0002020,7.17e-09,34;UBERON:0001893,1.45e-08,34;UBERON:0004638,1.92e-08,18;UBERON:0001986,1.92e-08,18;UBERON:0004852,1.92e-08,18;UBERON:0001869,3.83e-08,32;UBERON:0002791,4.42e-08,32;UBERON:0001017,5.33e-08,81;UBERON:0002619,7.43e-08,22;UBERON:0000479,2.57e-07,773;UBERON:0000487,8.62e-07,22;UBERON:0001950,9.10e-07,20 | |||
|phase1_expression=4.54195948176392,15.6293382440418,12.5449419645414,5.00366491765652,16.5375604938096,0.872338524100369,2.53299878168311,0.631719873426831,1.56711376919903,0,0,0.655324116390517,2.37390280405608,0.74259811776028,0.662794751455832,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,7.08055698328027,5.37361157336098,10.6823125088092,0,0,0,0,0,1.17440175733939,12.1878989877013,19.0517225096635,10.8505435357926,30.2285890223898,27.2070679455943,31.9393703866391,11.0502661472469,15.4929136912412,12.8569552429543,20.6861842846059,33.7157668177897,21.6794459626573,15.8230815777183,21.7736600549736,24.3576696785243,23.0979606093534,23.2374486090177,24.3767675869815,19.3889609728883,27.0177088557267,29.4387764623061,15.9163624032869,31.1301156263811,26.8521592835597,12.5343494070952,16.3560199249738,13.6391920170462,21.7656928971438,35.1778839308507,23.6672454618319,18.3411525637423,21.3807996552283,20.415751402281,14.5295880632009,40.1422623226445,25.0005286078299,26.8294213616166,19.1343869968539,19.9175713232957,32.6876316636301,31.6873243895578,38.2526896339051,10.5454715184262,18.4992509795154,18.8144078377573,0,0,0,2.56038133539904,0,0,0.661044872784862,0,0.569212969109448,0,0,1.32171328579026,1.12101712596307,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,1.80690142893327,0.895906278080929,0,1.65744076430812,0,0,0,0,7.31420598941885,1.34140171940727,3.19656404608826,1.80719576192283,0,0.289693037921647,0,0,0,0,0.175669571386252,4.12584087817795,0,0,7.46459005405772,9.0547463395619,18.2152405910845,1.43094374583205,2.28797964312051,0.74291500265913,7.15544666520138,3.4409383804245,8.67851254018986,2.82653970962005,5.45349267072878,11.8300758034229,8.56879362800923,32.0436781369968,54.7880044537534,57.9066660082879,3.22263453687318,6.0821768457481,7.56592378399325,15.8095124548724,8.91156142669936,45.8107606097329,29.8624065592806,41.1031903764126,6.13266549863533,12.3404535743857,20.1521918323448,0,0,0,3.47880366186723,0,1.19168262731897,0.573673241497627,1.77334191099179,1.12135520028461,0,0.74000264525148,5.60179863719579,0.404132016209064,0.163461903113459,0.151357427644931,1.72852777344,0,0.312160076830321,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0.213557388818567,0.635795703478686,0,0,0,0.744467425326359,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0.132529768321485,0.929551542956147,0.621966330092223,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90524363699719,1.40241773803446,0.4115740113314,0,0,1.96565443335525,4.13552934676983,0,9.83907508344908,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,4.76409277611544,6.94478268864916,12.7470281997181,4.74122638775565,0.858486162094873,50.4744862479165,104.131897986961,65.100449082463,0,7.0552493843521,0,5.46306988487375,5.52204483176528,2.30029607499127,0,0,0,0,0.50496973370552,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,10.6375246633948,5.2003718455683,0,0,0,0.57191197463259,0,0,2.60588947434988,0,0,0.904318131178758,1.74306691720059,0.499864955910285,29.1897073538857,37.1670247659774,73.7918788190611,0.479249710983165,1.14861935834114,1.42636905040718,17.0841941867743,3.6985738059069,29.0078760448631,0,0.591092280605782,0,0.641715181398742,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,1.82455590382974,0,0,10.1316332800215,9.05999643438191,5.12292277456533,0,0,0.907170879989041,6.20269519546942,5.67809301165831,8.13914273855913,15.8892545077069,9.72243773226737,3.69964018630297,2.96836132889982,2.92998418225046,1.9531789784444,3.77784917663522,1.55776328755086,2.90525946149898,8.7018803705968,0.40101294060657,0.184161977871793,2.64073230778596,1.27463817604702,6.42509633301178,0,0,0,0,0,2.27466768141793,3.74206151608334,4.53423423814493,3.08454505380579,0,0,0,0,0,2.19259876645935,1.8300481571743,0,0,0,2.16386124460217,0.183138929636687,0.495056999523528,0,0,16.068392984416,0.676695028044854,0.154048617114644,0,0.275673144969061,1.07420244868274,0.435050081742686,0.426133137080504,1.15741646340759,0,0,0,0,0,0,0.6970372701606,0.308033580176089,0,0,0,1.14499909393593,0.372158369359667,0.632758849437452,0.571890581771475,0,0.42793898803392,0.318203247925937,0,2.51821440616641,1.92175920815238,1.06031162111118,0.202182481573316,0,1.26377536871694,0,2.68084838594413,0,1.9109987597118,17.9584898581215,0,0,0,1.31535265576129,0.578775534266688,1.31178950409327,0,0.6196469961995,0,0.573645408816206,0.392996164052485,0,0.354761064070598,0.422215270595328,2.30506425071931,0,0,0,1.34060455107157,0,1.88287601553558,2.15252686335615,0,1.7737206141467,2.75668080248351,5.58192370155386,6.117097657139,3.41788312304498,5.00286728461357,6.9931586424653,5.83625980073446,5.40031437238115,2.37937552888281,24.9968326438287,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399121573143,0,0,0,0,0,0,0,3.69262196843137,0,0,0,0,12.453195238111,52.4277453957898,0,0,20.054536717966,8.01804638248124,12.5935887860685,13.91806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| |||
|short_description=p3@FAM198B | |||
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Revision as of 03:41, 22 January 2014
Short description: | p3@FAM198B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FAM198B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK304112, BC017701, BC100016_5end |
EntrezGene: | FAM198B |
HGNC: | 25312 |
UniProt: | B4E252Q9NYZ0Q6UWH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.73e-33 | 48 |
phagocyte | 8.73e-33 | 48 |
monopoietic cell | 1.20e-30 | 59 |
monocyte | 1.20e-30 | 59 |
monoblast | 1.20e-30 | 59 |
promonocyte | 1.20e-30 | 59 |
macrophage dendritic cell progenitor | 1.01e-28 | 61 |
classical monocyte | 7.80e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.80e-28 | 42 |
myeloid lineage restricted progenitor cell | 4.93e-26 | 66 |
granulocyte monocyte progenitor cell | 1.04e-23 | 67 |
myeloid leukocyte | 2.66e-23 | 72 |
endothelial cell | 8.30e-12 | 36 |
endothelial cell of vascular tree | 1.36e-11 | 24 |
myeloid cell | 1.86e-09 | 108 |
common myeloid progenitor | 1.86e-09 | 108 |
blood vessel endothelial cell | 1.92e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.92e-08 | 18 |
meso-epithelial cell | 3.26e-08 | 45 |
nongranular leukocyte | 4.62e-07 | 115 |