FFCP PHASE1:Mm9::chr5:27376084..27376112,+: Difference between revisions
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{{FFCP|EntrezGene=13483|HGNC=|MCL_coexpression_id=1|UniProt=E9PWX1,Q3TY19,Q9Z218|association_with_transcript=345bp_to_ENSMUST00000122171,NM_207282,uc008wtm.2_5end|description=CAGE_peak_7_at_Dpp6_5end|id=chr5:27376084..27376112,+|ontology_enrichment_celltype=CL:0000117!5.07e-18!23;CL:0000337!5.07e-18!23;CL:0000540!1.82e-14!33;CL:0000047!1.82e-14!33;CL:0000031!1.82e-14!33;CL:0000404!1.82e-14!33;CL:0000393!1.30e-10!39;CL:0000211!1.30e-10!39;CL:0000221!3.85e-10!44;CL:0000133!3.85e-10!44;CL:0002319!6.41e-10!43;CL:0000055!3.73e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.69e-24,23;CL:0000337,2.69e-24,23;CL:0000540,5.47e-15,33;CL:0000047,5.47e-15,33;CL:0000031,5.47e-15,33;CL:0000404,5.47e-15,33;CL:0000393,9.70e-12,39;CL:0000211,9.70e-12,39;CL:0002319,4.27e-10,43;CL:0000221,9.81e-10,44;CL:0000133,9.81e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.48e-28!73;UBERON:0005743!2.48e-28!73;UBERON:0000073!8.46e-28!75;UBERON:0001016!8.46e-28!75;UBERON:0001049!2.34e-27!52;UBERON:0005068!2.34e-27!52;UBERON:0006241!2.34e-27!52;UBERON:0007135!2.34e-27!52;UBERON:0002346!2.78e-27!71;UBERON:0003075!2.78e-27!71;UBERON:0007284!2.78e-27!71;UBERON:0000955!2.50e-26!50;UBERON:0006238!2.50e-26!50;UBERON:0002616!2.52e-25!49;UBERON:0000033!3.47e-24!63;UBERON:0004121!7.33e-24!102;UBERON:0000924!7.33e-24!102;UBERON:0006601!7.33e-24!102;UBERON:0002020!2.09e-23!34;UBERON:0003080!7.01e-21!40;UBERON:0003056!1.20e-20!49;UBERON:0002780!6.32e-20!39;UBERON:0001890!6.32e-20!39;UBERON:0006240!6.32e-20!39;UBERON:0002791!1.46e-19!29;UBERON:0003528!1.46e-19!29;UBERON:0001893!1.46e-19!29;UBERON:0007811!1.05e-13!86;UBERON:0000956!1.08e-12!21;UBERON:0001869!1.08e-12!21;UBERON:0000203!1.08e-12!21;UBERON:0000153!5.32e-11!94;UBERON:0002619!1.15e-10!17;UBERON:0002021!1.82e-08!10;UBERON:0000411!1.82e-08!10;UBERON:0001950!1.82e-08!10;UBERON:0002420!3.01e-08!8;UBERON:0007245!3.01e-08!8;UBERON:0010009!3.01e-08!8;UBERON:0010011!3.01e-08!8;UBERON:0000454!3.01e-08!8;UBERON:0003076!5.83e-07!12;UBERON:0003057!5.83e-07!12;UBERON:0002298!5.86e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.60e-36,54;UBERON:0001049,1.63e-33,52;UBERON:0005068,1.63e-33,52;UBERON:0006241,1.63e-33,52;UBERON:0007135,1.63e-33,52;UBERON:0001017,1.05e-32,73;UBERON:0002020,2.81e-32,34;UBERON:0001016,1.75e-31,75;UBERON:0002346,3.43e-28,64;UBERON:0003075,3.43e-28,64;UBERON:0007284,3.43e-28,64;UBERON:0000955,1.34e-27,47;UBERON:0006238,1.34e-27,47;UBERON:0002616,3.70e-26,46;UBERON:0003528,3.90e-26,29;UBERON:0002791,3.90e-26,29;UBERON:0001893,3.90e-26,29;UBERON:0004121,1.31e-24,95;UBERON:0000924,1.31e-24,95;UBERON:0006601,1.31e-24,95;UBERON:0010371,2.93e-23,73;UBERON:0003080,8.65e-23,40;UBERON:0002780,2.08e-21,39;UBERON:0001890,2.08e-21,39;UBERON:0006240,2.08e-21,39;UBERON:0003056,6.77e-20,49;UBERON:0010314,4.85e-17,92;UBERON:0002619,1.67e-15,17;UBERON:0000956,2.07e-15,21;UBERON:0001869,2.07e-15,21;UBERON:0000203,2.07e-15,21;UBERON:0002021,8.23e-13,10;UBERON:0000411,8.23e-13,10;UBERON:0001950,8.23e-13,10;UBERON:0002420,1.86e-12,8;UBERON:0007245,1.86e-12,8;UBERON:0010009,1.86e-12,8;UBERON:0010011,1.86e-12,8;UBERON:0000454,1.86e-12,8;UBERON:0003076,4.26e-11,12;UBERON:0003057,4.26e-11,12;UBERON:0000025,2.47e-09,114;UBERON:0002240,1.05e-08,6;UBERON:0005174,1.05e-08,6;UBERON:0001137,1.05e-08,6;UBERON:0000369,3.21e-08,5;UBERON:0002435,3.21e-08,5;UBERON:0000204,3.21e-08,5;UBERON:0010082,3.21e-08,5;UBERON:0004111,4.58e-08,122;UBERON:0002950,2.35e-07,4;UBERON:0001891,2.35e-07,4;UBERON:0009616,2.35e-07,4;UBERON:0010286,2.35e-07,4;UBERON:0001948,2.89e-07,5;UBERON:0002315,2.89e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,4.65327859977075,6.87688273053643,6.97214543856797,0,0,0,0,0,0,0,0.725827286159344,1.08004750665353,0.841299845405528,5.14171771926846,6.18431914664518,2.9397791811589,3.1629005436018,1.83843757322004,20.9220173898839,14.1732945274558,12.7493422602682,9.23204014111357,7.50198677539759,7.29278718779464,10.6089539620525,16.3201156909187,9.93188610549266,6.18720029494702,6.54909731675874,3.54158947068071,0.151452386666368,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,1.1875371125186,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0.376999773989026,0,0.144599356919912,0,0,0,0,0,4.39171195517321,4.81727425670947,0.255457055208591,0,0,0,19.0234112044125,13.7250180845588,10.0523481690292,8.51739168942155,9.2057564638919,14.5451631191692,13.6282660976916,0,0,0,1.89397670297827,0,0.229902104433473,0,0,0.340182495756639,0.384341160854549,0.374806898238915,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.565947171027,3.08713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.1726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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13483 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PWX1,uniprot:Q3TY19,uniprot:Q9Z218 | |||
|association_with_transcript=345bp_to_ENSMUST00000122171,NM_207282,uc008wtm.2_5end | |||
|cluster_id=chr5:27376084..27376112,+ | |||
|description=CAGE_peak_7_at_Dpp6_5end | |||
|id=chr5:27376084..27376112,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.07e-18!23;CL:0000337!5.07e-18!23;CL:0000540!1.82e-14!33;CL:0000047!1.82e-14!33;CL:0000031!1.82e-14!33;CL:0000404!1.82e-14!33;CL:0000393!1.30e-10!39;CL:0000211!1.30e-10!39;CL:0000221!3.85e-10!44;CL:0000133!3.85e-10!44;CL:0002319!6.41e-10!43;CL:0000055!3.73e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.69e-24,23;CL:0000337,2.69e-24,23;CL:0000540,5.47e-15,33;CL:0000047,5.47e-15,33;CL:0000031,5.47e-15,33;CL:0000404,5.47e-15,33;CL:0000393,9.70e-12,39;CL:0000211,9.70e-12,39;CL:0002319,4.27e-10,43;CL:0000221,9.81e-10,44;CL:0000133,9.81e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.48e-28!73;UBERON:0005743!2.48e-28!73;UBERON:0000073!8.46e-28!75;UBERON:0001016!8.46e-28!75;UBERON:0001049!2.34e-27!52;UBERON:0005068!2.34e-27!52;UBERON:0006241!2.34e-27!52;UBERON:0007135!2.34e-27!52;UBERON:0002346!2.78e-27!71;UBERON:0003075!2.78e-27!71;UBERON:0007284!2.78e-27!71;UBERON:0000955!2.50e-26!50;UBERON:0006238!2.50e-26!50;UBERON:0002616!2.52e-25!49;UBERON:0000033!3.47e-24!63;UBERON:0004121!7.33e-24!102;UBERON:0000924!7.33e-24!102;UBERON:0006601!7.33e-24!102;UBERON:0002020!2.09e-23!34;UBERON:0003080!7.01e-21!40;UBERON:0003056!1.20e-20!49;UBERON:0002780!6.32e-20!39;UBERON:0001890!6.32e-20!39;UBERON:0006240!6.32e-20!39;UBERON:0002791!1.46e-19!29;UBERON:0003528!1.46e-19!29;UBERON:0001893!1.46e-19!29;UBERON:0007811!1.05e-13!86;UBERON:0000956!1.08e-12!21;UBERON:0001869!1.08e-12!21;UBERON:0000203!1.08e-12!21;UBERON:0000153!5.32e-11!94;UBERON:0002619!1.15e-10!17;UBERON:0002021!1.82e-08!10;UBERON:0000411!1.82e-08!10;UBERON:0001950!1.82e-08!10;UBERON:0002420!3.01e-08!8;UBERON:0007245!3.01e-08!8;UBERON:0010009!3.01e-08!8;UBERON:0010011!3.01e-08!8;UBERON:0000454!3.01e-08!8;UBERON:0003076!5.83e-07!12;UBERON:0003057!5.83e-07!12;UBERON:0002298!5.86e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.60e-36,54;UBERON:0001049,1.63e-33,52;UBERON:0005068,1.63e-33,52;UBERON:0006241,1.63e-33,52;UBERON:0007135,1.63e-33,52;UBERON:0001017,1.05e-32,73;UBERON:0002020,2.81e-32,34;UBERON:0001016,1.75e-31,75;UBERON:0002346,3.43e-28,64;UBERON:0003075,3.43e-28,64;UBERON:0007284,3.43e-28,64;UBERON:0000955,1.34e-27,47;UBERON:0006238,1.34e-27,47;UBERON:0002616,3.70e-26,46;UBERON:0003528,3.90e-26,29;UBERON:0002791,3.90e-26,29;UBERON:0001893,3.90e-26,29;UBERON:0004121,1.31e-24,95;UBERON:0000924,1.31e-24,95;UBERON:0006601,1.31e-24,95;UBERON:0010371,2.93e-23,73;UBERON:0003080,8.65e-23,40;UBERON:0002780,2.08e-21,39;UBERON:0001890,2.08e-21,39;UBERON:0006240,2.08e-21,39;UBERON:0003056,6.77e-20,49;UBERON:0010314,4.85e-17,92;UBERON:0002619,1.67e-15,17;UBERON:0000956,2.07e-15,21;UBERON:0001869,2.07e-15,21;UBERON:0000203,2.07e-15,21;UBERON:0002021,8.23e-13,10;UBERON:0000411,8.23e-13,10;UBERON:0001950,8.23e-13,10;UBERON:0002420,1.86e-12,8;UBERON:0007245,1.86e-12,8;UBERON:0010009,1.86e-12,8;UBERON:0010011,1.86e-12,8;UBERON:0000454,1.86e-12,8;UBERON:0003076,4.26e-11,12;UBERON:0003057,4.26e-11,12;UBERON:0000025,2.47e-09,114;UBERON:0002240,1.05e-08,6;UBERON:0005174,1.05e-08,6;UBERON:0001137,1.05e-08,6;UBERON:0000369,3.21e-08,5;UBERON:0002435,3.21e-08,5;UBERON:0000204,3.21e-08,5;UBERON:0010082,3.21e-08,5;UBERON:0004111,4.58e-08,122;UBERON:0002950,2.35e-07,4;UBERON:0001891,2.35e-07,4;UBERON:0009616,2.35e-07,4;UBERON:0010286,2.35e-07,4;UBERON:0001948,2.89e-07,5;UBERON:0002315,2.89e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,4.65327859977075,6.87688273053643,6.97214543856797,0,0,0,0,0,0,0,0.725827286159344,1.08004750665353,0.841299845405528,5.14171771926846,6.18431914664518,2.9397791811589,3.1629005436018,1.83843757322004,20.9220173898839,14.1732945274558,12.7493422602682,9.23204014111357,7.50198677539759,7.29278718779464,10.6089539620525,16.3201156909187,9.93188610549266,6.18720029494702,6.54909731675874,3.54158947068071,0.151452386666368,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,1.1875371125186,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0.376999773989026,0,0.144599356919912,0,0,0,0,0,4.39171195517321,4.81727425670947,0.255457055208591,0,0,0,19.0234112044125,13.7250180845588,10.0523481690292,8.51739168942155,9.2057564638919,14.5451631191692,13.6282660976916,0,0,0,1.89397670297827,0,0.229902104433473,0,0,0.340182495756639,0.384341160854549,0.374806898238915,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.565947171027,3.08713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,14.7706542788769,15.003095883802,0,0,0.631016438832513,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,19.921921618152,0.283880170416537,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.428674070063185,0.532020700926821,0.356737635204141,0,0.913394847343798,0,0,0,0,0,0,0,0,0,14.0923229527987,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.578574190077352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,2.81523713176773,1.64836461840539,0.428736758158132,0,4.51801474093653,5.9842280745933,2.86447756719698,4.29632955859219,4.7955776383945,6.0431511791176,6.75022500231806,4.95353323546643,9.9691329976525,5.69536342927002,0.103787347584177,0,0.512200817262403,0.729320151204882,0,0.735374033800057,0.44449345560323,1.03017528619447,1.92551525755089,0.505394423527595,0.50695859978048,1.50901073108861,1.03005658216871,0.832326981263301,0.746661096422973,0.952587382566147,1.50649623728312,0,0.412085900803307,1.47198920134397,1.71434626192708,0.70990322463735,1.1921809497366,1.16277133305863,1.41164070622996,1.4384483341585,0.548783918618318,1.05227884575137,0.950628796921032,1.12228454331548,0.711810108745045,0.492522411877817,1.22769312950907,0.77468420592983,0.578719832943424,1.74867404556562,0.467863216890817,0.859484216193193,0.382576664137687,0,0 | |||
|short_description=p7@Dpp6 | |||
}} |
Revision as of 05:48, 4 August 2015
Short description: | p7@Dpp6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Dpp6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 345bp_to_ENSMUST00000122171, NM_207282, uc008wtm.2_5end |
EntrezGene: | 13483 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.69e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.69e-24 | 23 |
neuron | 5.47e-15 | 33 |
neuronal stem cell | 5.47e-15 | 33 |
neuroblast | 5.47e-15 | 33 |
electrically signaling cell | 5.47e-15 | 33 |
electrically responsive cell | 9.70e-12 | 39 |
electrically active cell | 9.70e-12 | 39 |
neural cell | 4.27e-10 | 43 |
ectodermal cell | 9.81e-10 | 44 |
neurectodermal cell | 9.81e-10 | 44 |