FFCP PHASE1:Mm9::chr10:40651725..40651744,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:40651725..40651744,+|id=chr10:40651725..40651744,+|ontology_enrichment_celltype=CL:0000117!5.76e-13!23;CL:0000337!5.76e-13!23;CL:0000540!2.08e-09!33;CL:0000047!2.08e-09!33;CL:0000031!2.08e-09!33;CL:0000404!2.08e-09!33;CL:0000221!5.63e-07!44;CL:0000133!5.63e-07!44;CL:0002319!7.80e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.14e-28,23;CL:0000337,1.14e-28,23;CL:0000540,3.02e-18,33;CL:0000047,3.02e-18,33;CL:0000031,3.02e-18,33;CL:0000404,3.02e-18,33;CL:0000393,1.40e-14,39;CL:0000211,1.40e-14,39;CL:0002319,1.02e-12,43;CL:0000221,2.64e-12,44;CL:0000133,2.64e-12,44;CL:0002609,5.18e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.84e-23!73;UBERON:0005743!1.84e-23!73;UBERON:0001049!5.02e-23!52;UBERON:0005068!5.02e-23!52;UBERON:0006241!5.02e-23!52;UBERON:0007135!5.02e-23!52;UBERON:0000073!5.60e-23!75;UBERON:0001016!5.60e-23!75;UBERON:0000955!6.35e-22!50;UBERON:0006238!6.35e-22!50;UBERON:0002346!1.41e-21!71;UBERON:0003075!1.41e-21!71;UBERON:0007284!1.41e-21!71;UBERON:0000033!2.02e-21!63;UBERON:0002616!2.53e-21!49;UBERON:0004121!1.19e-19!102;UBERON:0000924!1.19e-19!102;UBERON:0006601!1.19e-19!102;UBERON:0003056!1.78e-19!49;UBERON:0003080!3.16e-19!40;UBERON:0002020!8.11e-19!34;UBERON:0002780!8.49e-19!39;UBERON:0001890!8.49e-19!39;UBERON:0006240!8.49e-19!39;UBERON:0002791!9.14e-16!29;UBERON:0003528!9.14e-16!29;UBERON:0001893!9.14e-16!29;UBERON:0000153!3.47e-11!94;UBERON:0000956!5.52e-11!21;UBERON:0001869!5.52e-11!21;UBERON:0000203!5.52e-11!21;UBERON:0007811!2.28e-10!86;UBERON:0002021!7.80e-09!10;UBERON:0000411!7.80e-09!10;UBERON:0001950!7.80e-09!10;UBERON:0002619!1.45e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.25e-43,34;UBERON:0000073,1.93e-43,54;UBERON:0001049,5.75e-40,52;UBERON:0005068,5.75e-40,52;UBERON:0006241,5.75e-40,52;UBERON:0007135,5.75e-40,52;UBERON:0001017,2.79e-39,73;UBERON:0001016,6.03e-38,75;UBERON:0003528,5.04e-36,29;UBERON:0002791,5.04e-36,29;UBERON:0001893,5.04e-36,29;UBERON:0000955,9.19e-33,47;UBERON:0006238,9.19e-33,47;UBERON:0002616,1.97e-31,46;UBERON:0002780,2.01e-31,39;UBERON:0001890,2.01e-31,39;UBERON:0006240,2.01e-31,39;UBERON:0002346,1.19e-30,64;UBERON:0003075,1.19e-30,64;UBERON:0007284,1.19e-30,64;UBERON:0003080,1.94e-30,40;UBERON:0004121,1.08e-27,95;UBERON:0000924,1.08e-27,95;UBERON:0006601,1.08e-27,95;UBERON:0000956,1.90e-26,21;UBERON:0001869,1.90e-26,21;UBERON:0000203,1.90e-26,21;UBERON:0010371,1.12e-25,73;UBERON:0003056,2.13e-23,49;UBERON:0002619,2.21e-20,17;UBERON:0002021,1.40e-19,10;UBERON:0000411,1.40e-19,10;UBERON:0001950,1.40e-19,10;UBERON:0010314,2.19e-18,92;UBERON:0000025,5.24e-13,114;UBERON:0004111,1.53e-11,122;UBERON:0002420,2.12e-10,8;UBERON:0007245,2.12e-10,8;UBERON:0010009,2.12e-10,8;UBERON:0010011,2.12e-10,8;UBERON:0000454,2.12e-10,8;UBERON:0000369,1.04e-09,5;UBERON:0002435,1.04e-09,5;UBERON:0000204,1.04e-09,5;UBERON:0010082,1.04e-09,5;UBERON:0002240,1.07e-09,6;UBERON:0005174,1.07e-09,6;UBERON:0001137,1.07e-09,6;UBERON:0003076,1.82e-09,12;UBERON:0003057,1.82e-09,12;UBERON:0011216,8.82e-09,194;UBERON:0001948,1.81e-08,5;UBERON:0002315,1.81e-08,5|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.63011399117477,2.11596391708813,3.1691570175309,0.338844532069132,0,0,0,0,0.599200221036809,0.768436610643109,2.48855069540346,3.78016627328734,1.68259969081106,1.99955689082663,2.20868540951614,1.71487118900936,2.49198224647415,0,3.30347642998166,3.19218345212969,2.4577045320999,2.63772575460388,3.7509933876988,3.12548022334056,0.837548997004143,1.12552522006336,2.13917546887534,2.06240009831567,2.27794689278565,3.16879057903011,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.70667914902068,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.867426633830679,0.608930956624282,0.230615497256059,0.452167921657868,0.470354828542819,0,0,0,0,0,0,0,0,1.75668478206928,1.8850203613211,0,0,0,0,0.898743836428936,3.20250421973039,6.28271760564322,3.47648640384553,4.60287823194595,1.66230435647648,2.43361894601636,0,0,0,0,0.910843100738926,0.689706313300419,0.360124259610698,0.753524089178575,0.544291993210623,0.896796041993948,0.749613796477831,0,0.862271971731369,0.567318240503458,0.175951124163949,0.43839146485515,0.834141747676794,0.348252166522167,0.205782136407943,1.39323986772945,0,0,0,0.414251545071004,0,0.180062061461015,0,0.393528463494808,0.617068451549513,0.930135779001631,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.134206418760372,3.78521907415429,3.2929475961371,0,0.264450566663544,2.13288250535234,0.696710015581316,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.5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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:40651725..40651744,+ | |||
|description=CAGE_peak_at_chr10:40651725..40651744,+ | |||
|id=chr10:40651725..40651744,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.76e-13!23;CL:0000337!5.76e-13!23;CL:0000540!2.08e-09!33;CL:0000047!2.08e-09!33;CL:0000031!2.08e-09!33;CL:0000404!2.08e-09!33;CL:0000221!5.63e-07!44;CL:0000133!5.63e-07!44;CL:0002319!7.80e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.14e-28,23;CL:0000337,1.14e-28,23;CL:0000540,3.02e-18,33;CL:0000047,3.02e-18,33;CL:0000031,3.02e-18,33;CL:0000404,3.02e-18,33;CL:0000393,1.40e-14,39;CL:0000211,1.40e-14,39;CL:0002319,1.02e-12,43;CL:0000221,2.64e-12,44;CL:0000133,2.64e-12,44;CL:0002609,5.18e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.84e-23!73;UBERON:0005743!1.84e-23!73;UBERON:0001049!5.02e-23!52;UBERON:0005068!5.02e-23!52;UBERON:0006241!5.02e-23!52;UBERON:0007135!5.02e-23!52;UBERON:0000073!5.60e-23!75;UBERON:0001016!5.60e-23!75;UBERON:0000955!6.35e-22!50;UBERON:0006238!6.35e-22!50;UBERON:0002346!1.41e-21!71;UBERON:0003075!1.41e-21!71;UBERON:0007284!1.41e-21!71;UBERON:0000033!2.02e-21!63;UBERON:0002616!2.53e-21!49;UBERON:0004121!1.19e-19!102;UBERON:0000924!1.19e-19!102;UBERON:0006601!1.19e-19!102;UBERON:0003056!1.78e-19!49;UBERON:0003080!3.16e-19!40;UBERON:0002020!8.11e-19!34;UBERON:0002780!8.49e-19!39;UBERON:0001890!8.49e-19!39;UBERON:0006240!8.49e-19!39;UBERON:0002791!9.14e-16!29;UBERON:0003528!9.14e-16!29;UBERON:0001893!9.14e-16!29;UBERON:0000153!3.47e-11!94;UBERON:0000956!5.52e-11!21;UBERON:0001869!5.52e-11!21;UBERON:0000203!5.52e-11!21;UBERON:0007811!2.28e-10!86;UBERON:0002021!7.80e-09!10;UBERON:0000411!7.80e-09!10;UBERON:0001950!7.80e-09!10;UBERON:0002619!1.45e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.25e-43,34;UBERON:0000073,1.93e-43,54;UBERON:0001049,5.75e-40,52;UBERON:0005068,5.75e-40,52;UBERON:0006241,5.75e-40,52;UBERON:0007135,5.75e-40,52;UBERON:0001017,2.79e-39,73;UBERON:0001016,6.03e-38,75;UBERON:0003528,5.04e-36,29;UBERON:0002791,5.04e-36,29;UBERON:0001893,5.04e-36,29;UBERON:0000955,9.19e-33,47;UBERON:0006238,9.19e-33,47;UBERON:0002616,1.97e-31,46;UBERON:0002780,2.01e-31,39;UBERON:0001890,2.01e-31,39;UBERON:0006240,2.01e-31,39;UBERON:0002346,1.19e-30,64;UBERON:0003075,1.19e-30,64;UBERON:0007284,1.19e-30,64;UBERON:0003080,1.94e-30,40;UBERON:0004121,1.08e-27,95;UBERON:0000924,1.08e-27,95;UBERON:0006601,1.08e-27,95;UBERON:0000956,1.90e-26,21;UBERON:0001869,1.90e-26,21;UBERON:0000203,1.90e-26,21;UBERON:0010371,1.12e-25,73;UBERON:0003056,2.13e-23,49;UBERON:0002619,2.21e-20,17;UBERON:0002021,1.40e-19,10;UBERON:0000411,1.40e-19,10;UBERON:0001950,1.40e-19,10;UBERON:0010314,2.19e-18,92;UBERON:0000025,5.24e-13,114;UBERON:0004111,1.53e-11,122;UBERON:0002420,2.12e-10,8;UBERON:0007245,2.12e-10,8;UBERON:0010009,2.12e-10,8;UBERON:0010011,2.12e-10,8;UBERON:0000454,2.12e-10,8;UBERON:0000369,1.04e-09,5;UBERON:0002435,1.04e-09,5;UBERON:0000204,1.04e-09,5;UBERON:0010082,1.04e-09,5;UBERON:0002240,1.07e-09,6;UBERON:0005174,1.07e-09,6;UBERON:0001137,1.07e-09,6;UBERON:0003076,1.82e-09,12;UBERON:0003057,1.82e-09,12;UBERON:0011216,8.82e-09,194;UBERON:0001948,1.81e-08,5;UBERON:0002315,1.81e-08,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.63011399117477,2.11596391708813,3.1691570175309,0.338844532069132,0,0,0,0,0.599200221036809,0.768436610643109,2.48855069540346,3.78016627328734,1.68259969081106,1.99955689082663,2.20868540951614,1.71487118900936,2.49198224647415,0,3.30347642998166,3.19218345212969,2.4577045320999,2.63772575460388,3.7509933876988,3.12548022334056,0.837548997004143,1.12552522006336,2.13917546887534,2.06240009831567,2.27794689278565,3.16879057903011,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.70667914902068,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0.867426633830679,0.608930956624282,0.230615497256059,0.452167921657868,0.470354828542819,0,0,0,0,0,0,0,0,1.75668478206928,1.8850203613211,0,0,0,0,0.898743836428936,3.20250421973039,6.28271760564322,3.47648640384553,4.60287823194595,1.66230435647648,2.43361894601636,0,0,0,0,0.910843100738926,0.689706313300419,0.360124259610698,0.753524089178575,0.544291993210623,0.896796041993948,0.749613796477831,0,0.862271971731369,0.567318240503458,0.175951124163949,0.43839146485515,0.834141747676794,0.348252166522167,0.205782136407943,1.39323986772945,0,0,0,0.414251545071004,0,0.180062061461015,0,0.393528463494808,0.617068451549513,0.930135779001631,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.134206418760372,3.78521907415429,3.2929475961371,0,0.264450566663544,2.13288250535234,0.696710015581316,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0.610953983535943,0.581857461502877,0,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.505157755894224,0,0.482443521363367,0,0.37898282354097,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.80275294993896,1.05490517932983,0.163934945376675,0,0,0,0.430846795465598,0,0.891194696329576,0,0.809621403349789,0.584511715822624,0,1.92792789853084,0.283880170416537,0.178065603667255,0.651547837414304,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0.340439605753788,1.26042765821917,0.905510786479282,0.643011105094777,0.354680467284547,0.356737635204141,0.822745103010605,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,1.8542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.540026704109006,0.209088296014469,0.87345025498471,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0.56369293868419,1.49516546043979,0.992750942742586,0.388902376688095,0.387479470433193,1.85851738039856,0.469428954583016,1.69265700297135,1.46803082195995,0.966336483304024,0.864090018773596,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.915758121336325,0.214368379079066,0,3.95326289831947,5.52390283808612,10.8850147553485,6.18671456437275,4.11049511862385,5.2877572817279,5.40018000185445,4.95353323546643,4.07828168085784,3.62432218226274,1.55681021376265,0.399024873401031,0.341467211508268,0.243106717068294,0.838452650511929,0,0.44449345560323,0.618105171716683,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.655490552289177,0.512201219238954,0.631790158511746,0,0.115884325944855,0.192909220463705,0.824171801606613,1.61918812147837,0,0.532427418478012,0.476872379894642,0.145346416632329,0.282328141245992,0.592302255241736,0.548783918618318,0.263069711437843,0.407412341537585,0,0.711810108745045,0.29551344712669,0.409231043169689,0.464810523557898,0.192906610981141,0.749431733813838,0.467863216890817,0,0,0.220591419119515,0 | |||
|short_description=p@chr10:40651725..40651744,+ | |||
}} |
Latest revision as of 08:58, 4 August 2015
Short description: | p@chr10:40651725..40651744, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:40651725..40651744, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.14e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.14e-28 | 23 |
neuron | 3.02e-18 | 33 |
neuronal stem cell | 3.02e-18 | 33 |
neuroblast | 3.02e-18 | 33 |
electrically signaling cell | 3.02e-18 | 33 |
electrically responsive cell | 1.40e-14 | 39 |
electrically active cell | 1.40e-14 | 39 |
neural cell | 1.02e-12 | 43 |
ectodermal cell | 2.64e-12 | 44 |
neurectodermal cell | 2.64e-12 | 44 |
neuron of cerebral cortex | 5.18e-07 | 6 |