FFCP PHASE1:Mm9::chr5:92934544..92934692,-: Difference between revisions
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{{FFCP|EntrezGene=12492|HGNC=|UniProt=O35114|association_with_transcript=0bp_to_ENSMUST00000031377,NM_007644,uc008ydm.1_5end|description=CAGE_peak_1_at_Scarb2_5end|id=chr5:92934544..92934692,-|ontology_enrichment_celltype=CL:0000393!6.68e-17!39;CL:0000211!6.68e-17!39;CL:0000055!1.07e-16!50;CL:0000540!3.97e-14!33;CL:0000047!3.97e-14!33;CL:0000031!3.97e-14!33;CL:0000404!3.97e-14!33;CL:0000221!1.48e-13!44;CL:0000133!1.48e-13!44;CL:0002319!2.42e-13!43;CL:0002321!7.43e-10!70;CL:0000220!7.43e-10!70;CL:0000117!1.02e-08!23;CL:0000337!1.02e-08!23;CL:0000107!5.03e-07!9|ontology_enrichment_celltype_v019_2=CL:0000393,6.68e-17,39;CL:0000211,6.68e-17,39;CL:0000540,3.97e-14,33;CL:0000047,3.97e-14,33;CL:0000031,3.97e-14,33;CL:0000404,3.97e-14,33;CL:0000221,1.48e-13,44;CL:0000133,1.48e-13,44;CL:0002319,2.42e-13,43;CL:0002321,7.43e-10,70;CL:0000117,1.02e-08,23;CL:0000337,1.02e-08,23;CL:0000107,5.03e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!6.27e-19!122;UBERON:0000073!9.02e-19!75;UBERON:0001016!9.02e-19!75;UBERON:0001017!1.83e-17!73;UBERON:0005743!1.83e-17!73;UBERON:0000025!7.05e-17!114;UBERON:0004121!1.35e-15!102;UBERON:0000924!1.35e-15!102;UBERON:0006601!1.35e-15!102;UBERON:0000477!6.72e-10!154;UBERON:0001049!1.31e-09!52;UBERON:0005068!1.31e-09!52;UBERON:0006241!1.31e-09!52;UBERON:0007135!1.31e-09!52;UBERON:0002020!2.12e-09!34;UBERON:0000955!9.53e-09!50;UBERON:0006238!9.53e-09!50;UBERON:0002616!1.57e-08!49;UBERON:0000010!2.33e-08!11;UBERON:0000483!3.55e-08!181;UBERON:0002346!3.58e-08!71;UBERON:0003075!3.58e-08!71;UBERON:0007284!3.58e-08!71;UBERON:0000480!7.97e-08!308;UBERON:0000467!7.97e-08!308;UBERON:0000119!1.19e-07!183;UBERON:0000033!1.46e-07!63;UBERON:0002791!1.60e-07!29;UBERON:0003528!1.60e-07!29;UBERON:0001893!1.60e-07!29;UBERON:0003080!2.62e-07!40;UBERON:0002410!5.03e-07!9;UBERON:0002780!5.67e-07!39;UBERON:0001890!5.67e-07!39;UBERON:0006240!5.67e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0004111,6.27e-19,122;UBERON:0001016,9.02e-19,75;UBERON:0001017,1.83e-17,73;UBERON:0004121,5.17e-17,95;UBERON:0000924,5.17e-17,95;UBERON:0006601,5.17e-17,95;UBERON:0000025,7.05e-17,114;UBERON:0010314,4.92e-11,92;UBERON:0000073,2.40e-10,54;UBERON:0010371,9.16e-10,73;UBERON:0001049,1.31e-09,52;UBERON:0005068,1.31e-09,52;UBERON:0006241,1.31e-09,52;UBERON:0007135,1.31e-09,52;UBERON:0002020,2.12e-09,34;UBERON:0002346,2.39e-09,64;UBERON:0003075,2.39e-09,64;UBERON:0007284,2.39e-09,64;UBERON:0011216,7.83e-09,194;UBERON:0000483,1.16e-08,174;UBERON:0000010,2.33e-08,11;UBERON:0000119,4.14e-08,176;UBERON:0000923,6.27e-08,291;UBERON:0010316,6.27e-08,291;UBERON:0005291,6.27e-08,291;UBERON:0006598,6.27e-08,291;UBERON:0010317,6.27e-08,291;UBERON:0002532,6.27e-08,291;UBERON:0000955,1.42e-07,47;UBERON:0006238,1.42e-07,47;UBERON:0003528,1.60e-07,29;UBERON:0002791,1.60e-07,29;UBERON:0001893,1.60e-07,29;UBERON:0002616,2.30e-07,46;UBERON:0003080,2.62e-07,40;UBERON:0002410,5.03e-07,9;UBERON:0002780,5.67e-07,39;UBERON:0001890,5.67e-07,39;UBERON:0006240,5.67e-07,39;UBERON:0002050,8.93e-07,294|phase1_expression=67.2625157840135,39.0852456556084,53.2349110085757,25.4069937497737,39.5707626657614,50.8674193893026,55.3661958211396,53.5861792282542,14.5012383816217,14.9801296846076,3.5955773327356,2.39316476986009,49.9906131399121,48.1686417328676,34.6434152288289,30.1688148410841,16.7894850750755,34.3853760240479,46.8931362931627,36.9218997064286,56.8939611110657,32.9645957986939,25.0751797573378,41.2780450806989,49.5524047105087,46.5127890933166,65.9065854123384,59.4700602213054,54.3466979645229,58.9750503638238,94.4571975391598,11.4305521222734,12.916360539276,15.8481681015439,28.8851619751275,31.9170519088305,25.1128308202714,38.9234416585324,53.9121387721422,31.9349483824017,48.2349820185432,37.5675016727145,34.9567454182431,78.8114080527114,83.4332143936605,142.799373181788,32.8604364626176,45.5672576835133,67.2239719167484,65.5228759880335,67.6134416450501,46.0008205967909,33.3887386054895,42.071004236658,43.0200062902354,141.749949255807,209.169411155292,191.314346234931,98.9327493603433,119.551961315479,100.145361753976,41.3390329124341,31.1253178638899,107.987966073768,113.719631695202,91.6519348280469,86.2848318293006,74.15413292706,81.7074144990804,78.0334323557172,75.2963361637948,106.833468167023,118.606406491016,79.3740378912902,66.8042932997107,73.5375029288017,113.41935742937,126.155090028165,123.653259271276,124.368769329573,105.94269129159,109.39180781692,132.611924525656,132.249213357445,133.087273813602,118.735319945888,113.043114554488,97.4869101666322,175.609042339654,278.632342113718,295.661778475711,148.85333071778,53.0377640292045,118.194998968682,194.932925234301,164.425867564722,88.0586514226084,28.1210032253795,30.1351765339328,28.2671659608272,84.7877387055617,33.3648841277226,38.2207859559969,21.3320010945999,50.4424125556129,38.2573396867399,44.9916756063157,90.4336327374955,47.9035084747268,71.5491110292455,35.737977313824,45.6698217468212,47.7374079320041,48.2312449768392,61.1461277105665,60.0686306555849,61.5515469658591,75.7700630260337,40.6920853896942,64.8685068289111,43.5057791366975,35.8807687320064,82.0123749359738,68.8034872977136,74.56302762559,44.1940705510863,47.2071590553326,21.5964983157627,43.5850878860612,109.047585486711,73.2000964509802,79.7905135916689,90.0409978595992,87.7104018643034,100.984989655946,109.188370044601,102.95959685267,51.2556718913583,35.3811861807145,33.4602550859494,31.7493880828997,47.5897356177289,45.5557188407534,57.8706500489146,79.1944850121456,59.8291073730248,75.5235899951414,63.3823258310588,25.2214551731425,33.0935640293684,31.1433489770189,37.2632745126877,46.4338906206748,36.9147296513497,48.3588020558667,29.855140022774,23.1730351813367,29.5950093181922,41.2037074123609,39.5610225542809,47.1397380562003,48.616756594474,52.5573312999167,54.8972206575257,55.3818935265688,60.2262916903556,66.8000769485052,129.375999342824,91.1661568520682,94.5604593095589,105.875865266888,102.924791147434,95.284750036316,120.517364046814,80.1204704029325,99.7145693955266,31.3897843834608,49.1878053994192,30.2869315760032,32.7453707323218,36.0828891701861,36.9080850060717,36.9147552782485,47.1759552759147,53.6217839545298,64.7266892065363,81.4326076512873,76.3992852638019,79.1554193703628,46.7386092500195,57.7088593165434,64.3226312611606,18.9667900953082,26.962648975896,27.0498565615393,33.1951664387862,26.9593957163,39.3461949584687,37.6889761260573,35.1312152191453,32.8127341188473,43.312404536552,148.522766170662,12.6802280344231,20.2455764966599,15.5154857545549,24.7489348093974,34.9706881641004,43.7956465064042,53.7991777033016,75.7171509039415,68.3657918838323,143.768206527355,106.80445198086,109.837260936325,85.1190818681767,83.2403998741673,126.882646118566,149.280577654617,38.2772651776379,35.2004349114776,43.4547419584482,47.4074301542774,65.3274404023081,85.933754359851,142.837830231909,103.723924821874,119.148003031041,110.661609448296,126.994068904697,116.044307813882,150.145722807609,76.9035548090288,83.7614753080813,54.094070032094,52.1520450515944,118.807436590966,132.683629222374,30.0000950039316,95.6864814104574,129.042861741249,133.920489293747,179.232266913689,196.67132071495,275.601959839922,266.65809200308,143.302988392913,158.402674987931,171.950183406738,86.1141128010443,81.4736089095462,41.6673512581377,59.4537401640553,91.0635078808396,66.3725691699814,39.087682420952,32.9532677091579,47.5284800984863,53.4496426114199,58.4126781093462,94.5847552995689,79.6138867555737,72.0124704337137,63.2073515871632,78.0097703454991,67.0381031113214,113.706828321765,39.4333795928569,42.9470830158745,42.6530699712869,52.8473896253975,62.7858237959288,68.6169415910844,69.113543449014,48.8117152772517,110.36450892005,119.305863347734,61.9972311059965,62.6481975580113,55.2466392341908,89.2905133143461,95.6941445513707,61.2109756922687,151.677897044597,51.2612642393558,39.6262786489387,50.743300499301,39.7457444279898,33.4900857916512,45.7556346413045,38.5851036086052,41.2856784354791,45.0531914602422,51.5522133728161,32.5826073388569,40.0539350239892,48.4943980289888,60.0083409561525,62.0149681039144,81.997522601971,103.730086935297,73.2916637555283,149.834909125313,62.1339313086926,13.5286305284206,40.5189839779183,36.7317848814757,31.6955437000798,38.8771068667971,41.3942507452406,55.6273311180874,44.6601040014749,34.9181616937617,21.0178185118625,21.0261904568242,59.0940795574693,35.8823631063591,38.4138979796454,38.1967219554717,39.7439264381809,51.2597895335663,48.4387661565474,48.8852334947851,47.858097275422,50.8299400388849,53.5387043076623,61.4959227467838,57.6308931425573,73.0480638634806,63.7112377958744,24.8624267778952,10.1376657968708,24.0075001400632,130.789355159793,128.750178159511,48.7183320550925,73.3139856450405,98.8097044949666,86.9717837630282,89.7634211188995,91.0903866368641,68.741272937475,95.2264702481193,101.97817614761,95.1781725326846,83.759743799705,102.41018443043,83.8771705037948,14.0112919238638,25.138567024265,42.1712006212711,41.0850351845417,25.9920321658698,35.2979536224027,54.894941766999,55.2173953400236,63.8629227087712,60.1419363997838,66.1580972713526,56.7765287572089,50.0982064963871,51.6042728383246,49.1073259570493,55.7263618801196,53.7703272384129,57.6798569186478,53.1590812036265,56.2299874913398,55.2019496340519,57.324685389466,48.6409827492535,65.6965803178125,56.653847010029,58.9763817004985,57.9881674006689,46.0371995016225,55.5438825629575,61.1645076106935,60.0293191708321,53.8819518594332,49.5169562235324,53.1433365267863,55.1712907406064,62.4526444844865,58.7168337197975,73.0561583764214,74.6024495068489,79.8540937212646,75.5889144122574|short_description=p1@Scarb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12492 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35114 | |||
|association_with_transcript=0bp_to_ENSMUST00000031377,NM_007644,uc008ydm.1_5end | |||
|cluster_id=chr5:92934544..92934692,- | |||
|description=CAGE_peak_1_at_Scarb2_5end | |||
|id=chr5:92934544..92934692,- | |||
|ontology_enrichment_celltype=CL:0000393!6.68e-17!39;CL:0000211!6.68e-17!39;CL:0000055!1.07e-16!50;CL:0000540!3.97e-14!33;CL:0000047!3.97e-14!33;CL:0000031!3.97e-14!33;CL:0000404!3.97e-14!33;CL:0000221!1.48e-13!44;CL:0000133!1.48e-13!44;CL:0002319!2.42e-13!43;CL:0002321!7.43e-10!70;CL:0000220!7.43e-10!70;CL:0000117!1.02e-08!23;CL:0000337!1.02e-08!23;CL:0000107!5.03e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,6.68e-17,39;CL:0000211,6.68e-17,39;CL:0000540,3.97e-14,33;CL:0000047,3.97e-14,33;CL:0000031,3.97e-14,33;CL:0000404,3.97e-14,33;CL:0000221,1.48e-13,44;CL:0000133,1.48e-13,44;CL:0002319,2.42e-13,43;CL:0002321,7.43e-10,70;CL:0000117,1.02e-08,23;CL:0000337,1.02e-08,23;CL:0000107,5.03e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!6.27e-19!122;UBERON:0000073!9.02e-19!75;UBERON:0001016!9.02e-19!75;UBERON:0001017!1.83e-17!73;UBERON:0005743!1.83e-17!73;UBERON:0000025!7.05e-17!114;UBERON:0004121!1.35e-15!102;UBERON:0000924!1.35e-15!102;UBERON:0006601!1.35e-15!102;UBERON:0000477!6.72e-10!154;UBERON:0001049!1.31e-09!52;UBERON:0005068!1.31e-09!52;UBERON:0006241!1.31e-09!52;UBERON:0007135!1.31e-09!52;UBERON:0002020!2.12e-09!34;UBERON:0000955!9.53e-09!50;UBERON:0006238!9.53e-09!50;UBERON:0002616!1.57e-08!49;UBERON:0000010!2.33e-08!11;UBERON:0000483!3.55e-08!181;UBERON:0002346!3.58e-08!71;UBERON:0003075!3.58e-08!71;UBERON:0007284!3.58e-08!71;UBERON:0000480!7.97e-08!308;UBERON:0000467!7.97e-08!308;UBERON:0000119!1.19e-07!183;UBERON:0000033!1.46e-07!63;UBERON:0002791!1.60e-07!29;UBERON:0003528!1.60e-07!29;UBERON:0001893!1.60e-07!29;UBERON:0003080!2.62e-07!40;UBERON:0002410!5.03e-07!9;UBERON:0002780!5.67e-07!39;UBERON:0001890!5.67e-07!39;UBERON:0006240!5.67e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,6.27e-19,122;UBERON:0001016,9.02e-19,75;UBERON:0001017,1.83e-17,73;UBERON:0004121,5.17e-17,95;UBERON:0000924,5.17e-17,95;UBERON:0006601,5.17e-17,95;UBERON:0000025,7.05e-17,114;UBERON:0010314,4.92e-11,92;UBERON:0000073,2.40e-10,54;UBERON:0010371,9.16e-10,73;UBERON:0001049,1.31e-09,52;UBERON:0005068,1.31e-09,52;UBERON:0006241,1.31e-09,52;UBERON:0007135,1.31e-09,52;UBERON:0002020,2.12e-09,34;UBERON:0002346,2.39e-09,64;UBERON:0003075,2.39e-09,64;UBERON:0007284,2.39e-09,64;UBERON:0011216,7.83e-09,194;UBERON:0000483,1.16e-08,174;UBERON:0000010,2.33e-08,11;UBERON:0000119,4.14e-08,176;UBERON:0000923,6.27e-08,291;UBERON:0010316,6.27e-08,291;UBERON:0005291,6.27e-08,291;UBERON:0006598,6.27e-08,291;UBERON:0010317,6.27e-08,291;UBERON:0002532,6.27e-08,291;UBERON:0000955,1.42e-07,47;UBERON:0006238,1.42e-07,47;UBERON:0003528,1.60e-07,29;UBERON:0002791,1.60e-07,29;UBERON:0001893,1.60e-07,29;UBERON:0002616,2.30e-07,46;UBERON:0003080,2.62e-07,40;UBERON:0002410,5.03e-07,9;UBERON:0002780,5.67e-07,39;UBERON:0001890,5.67e-07,39;UBERON:0006240,5.67e-07,39;UBERON:0002050,8.93e-07,294 | |||
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| |||
|short_description=p1@Scarb2 | |||
}} |
Revision as of 19:35, 4 August 2015
Short description: | p1@Scarb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Scarb2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000031377, NM_007644, uc008ydm.1_5end |
EntrezGene: | 12492 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 6.68e-17 | 39 |
electrically active cell | 6.68e-17 | 39 |
neuron | 3.97e-14 | 33 |
neuronal stem cell | 3.97e-14 | 33 |
neuroblast | 3.97e-14 | 33 |
electrically signaling cell | 3.97e-14 | 33 |
ectodermal cell | 1.48e-13 | 44 |
neurectodermal cell | 1.48e-13 | 44 |
neural cell | 2.42e-13 | 43 |
embryonic cell | 7.43e-10 | 70 |
CNS neuron (sensu Vertebrata) | 1.02e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.02e-08 | 23 |
autonomic neuron | 5.03e-07 | 9 |