FFCP PHASE1:Mm9::chr1:137043311..137043322,+: Difference between revisions
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{{FFCP|EntrezGene=68724|HGNC=|MCL_coexpression_id=22|UniProt=Q8VEH3|association_with_transcript=-78bp_to_ENSMUST00000027684_5end|description=CAGE_peak_3_at_Arl8a_5end|id=chr1:137043311..137043322,+|ontology_enrichment_celltype=CL:0000221!9.11e-23!44;CL:0000133!9.11e-23!44;CL:0002319!2.42e-22!43;CL:0000055!1.37e-19!50;CL:0000540!2.54e-17!33;CL:0000047!2.54e-17!33;CL:0000031!2.54e-17!33;CL:0000404!2.54e-17!33;CL:0000393!1.36e-15!39;CL:0000211!1.36e-15!39;CL:0000117!3.73e-15!23;CL:0000337!3.73e-15!23;CL:0002321!3.84e-10!70;CL:0000220!3.84e-10!70|ontology_enrichment_celltype_v019_2=CL:0000221,1.65e-32,44;CL:0000133,1.65e-32,44;CL:0002319,1.11e-31,43;CL:0000117,3.92e-27,23;CL:0000337,3.92e-27,23;CL:0000540,4.14e-25,33;CL:0000047,4.14e-25,33;CL:0000031,4.14e-25,33;CL:0000404,4.14e-25,33;CL:0000393,2.62e-21,39;CL:0000211,2.62e-21,39;CL:0002321,3.56e-17,70;CL:0002609,3.60e-09,6;CL:0000333,3.19e-07,10;CL:0000095,3.19e-07,10;CL:0000243,3.19e-07,10;CL:0000123,3.19e-07,10;CL:0000125,3.19e-07,10;CL:0000030,3.19e-07,10;CL:0000339,3.19e-07,10;CL:0000723,7.31e-07,91;CL:0000048,7.31e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.67e-31!75;UBERON:0001016!6.67e-31!75;UBERON:0001017!1.02e-29!73;UBERON:0005743!1.02e-29!73;UBERON:0004121!6.06e-25!102;UBERON:0000924!6.06e-25!102;UBERON:0006601!6.06e-25!102;UBERON:0001049!3.94e-20!52;UBERON:0005068!3.94e-20!52;UBERON:0006241!3.94e-20!52;UBERON:0007135!3.94e-20!52;UBERON:0002346!1.14e-18!71;UBERON:0003075!1.14e-18!71;UBERON:0007284!1.14e-18!71;UBERON:0000955!3.83e-18!50;UBERON:0006238!3.83e-18!50;UBERON:0002616!7.92e-18!49;UBERON:0002020!4.02e-17!34;UBERON:0000033!1.72e-16!63;UBERON:0003080!6.63e-14!40;UBERON:0002791!8.07e-14!29;UBERON:0003528!8.07e-14!29;UBERON:0001893!8.07e-14!29;UBERON:0002780!2.07e-13!39;UBERON:0001890!2.07e-13!39;UBERON:0006240!2.07e-13!39;UBERON:0003056!2.55e-13!49;UBERON:0000956!1.84e-09!21;UBERON:0001869!1.84e-09!21;UBERON:0000203!1.84e-09!21;UBERON:0007811!6.19e-08!86;UBERON:0003076!4.05e-07!12;UBERON:0003057!4.05e-07!12;UBERON:0002619!4.58e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.10e-42,75;UBERON:0001017,1.52e-40,73;UBERON:0004121,6.18e-36,95;UBERON:0000924,6.18e-36,95;UBERON:0006601,6.18e-36,95;UBERON:0000073,6.19e-33,54;UBERON:0001049,6.37e-31,52;UBERON:0005068,6.37e-31,52;UBERON:0006241,6.37e-31,52;UBERON:0007135,6.37e-31,52;UBERON:0002346,4.60e-27,64;UBERON:0003075,4.60e-27,64;UBERON:0007284,4.60e-27,64;UBERON:0002020,4.72e-27,34;UBERON:0002616,1.12e-23,46;UBERON:0010371,2.36e-23,73;UBERON:0000955,5.99e-23,47;UBERON:0006238,5.99e-23,47;UBERON:0003528,8.66e-21,29;UBERON:0002791,8.66e-21,29;UBERON:0001893,8.66e-21,29;UBERON:0003080,8.99e-20,40;UBERON:0002780,7.30e-19,39;UBERON:0001890,7.30e-19,39;UBERON:0006240,7.30e-19,39;UBERON:0003056,2.49e-18,49;UBERON:0010314,9.30e-17,92;UBERON:0000956,1.63e-13,21;UBERON:0001869,1.63e-13,21;UBERON:0000203,1.63e-13,21;UBERON:0003076,5.84e-12,12;UBERON:0003057,5.84e-12,12;UBERON:0002619,3.89e-09,17;UBERON:0000025,6.03e-09,114;UBERON:0002240,7.59e-09,6;UBERON:0005174,7.59e-09,6;UBERON:0001137,7.59e-09,6;UBERON:0002420,1.27e-08,8;UBERON:0007245,1.27e-08,8;UBERON:0010009,1.27e-08,8;UBERON:0010011,1.27e-08,8;UBERON:0000454,1.27e-08,8;UBERON:0004111,3.21e-08,122;UBERON:0000369,5.41e-08,5;UBERON:0002435,5.41e-08,5;UBERON:0000204,5.41e-08,5;UBERON:0010082,5.41e-08,5;UBERON:0011216,5.43e-08,194;UBERON:0001948,9.53e-08,5;UBERON:0002315,9.53e-08,5;UBERON:0001954,2.77e-07,7;UBERON:0003022,2.77e-07,7;UBERON:0002421,2.77e-07,7;UBERON:0000349,2.77e-07,7;UBERON:0002600,2.77e-07,7|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0,0.234064526321993,0.171217968225505,0,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,1.19060606211498,0.0992909512008853,0,0,0.22940928106717,0,0.430761996159075,0,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0.7813353445238,0,0,0.683045484958446,0.485510353031154,0.125896817975577,0.608261587317087,0.183546752161682,2.34717403304412,2.61630187656536,3.51497892375155,0.972149495371417,0.839918529752175,1.43752564364972,0,0,0,0.771778308107841,1.14613375975503,0,10.3181395038395,3.1739458756322,6.97214543856797,1.69422266034566,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,2.69640099466564,6.53171119046643,5.49554945234932,7.56033254657468,7.57169860864975,6.85562362569129,4.63823935998388,5.75706756310284,5.84657373211242,6.43453150627015,1.10115880999389,3.83062014255563,3.84016333140609,9.10015385338338,11.5274430939036,9.89735404057844,3.62937898701795,0.56276261003168,2.59757021220577,3.83017161115768,4.6982654663704,8.20157561631323,2.12033341332915,1.5870027622425,0,0,0.679971333707751,0,0,0,0,0.170430322578058,0.519572009205738,0.70667914902068,1.26759077799012,0,0,0,0.216491041011214,0.506719730950197,0,0,0,0.148442139064825,0,0.304465478312141,0.691846491768175,0.30144528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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68724 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VEH3 | |||
|association_with_transcript=-78bp_to_ENSMUST00000027684_5end | |||
|cluster_id=chr1:137043311..137043322,+ | |||
|description=CAGE_peak_3_at_Arl8a_5end | |||
|id=chr1:137043311..137043322,+ | |||
|ontology_enrichment_celltype=CL:0000221!9.11e-23!44;CL:0000133!9.11e-23!44;CL:0002319!2.42e-22!43;CL:0000055!1.37e-19!50;CL:0000540!2.54e-17!33;CL:0000047!2.54e-17!33;CL:0000031!2.54e-17!33;CL:0000404!2.54e-17!33;CL:0000393!1.36e-15!39;CL:0000211!1.36e-15!39;CL:0000117!3.73e-15!23;CL:0000337!3.73e-15!23;CL:0002321!3.84e-10!70;CL:0000220!3.84e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.65e-32,44;CL:0000133,1.65e-32,44;CL:0002319,1.11e-31,43;CL:0000117,3.92e-27,23;CL:0000337,3.92e-27,23;CL:0000540,4.14e-25,33;CL:0000047,4.14e-25,33;CL:0000031,4.14e-25,33;CL:0000404,4.14e-25,33;CL:0000393,2.62e-21,39;CL:0000211,2.62e-21,39;CL:0002321,3.56e-17,70;CL:0002609,3.60e-09,6;CL:0000333,3.19e-07,10;CL:0000095,3.19e-07,10;CL:0000243,3.19e-07,10;CL:0000123,3.19e-07,10;CL:0000125,3.19e-07,10;CL:0000030,3.19e-07,10;CL:0000339,3.19e-07,10;CL:0000723,7.31e-07,91;CL:0000048,7.31e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.67e-31!75;UBERON:0001016!6.67e-31!75;UBERON:0001017!1.02e-29!73;UBERON:0005743!1.02e-29!73;UBERON:0004121!6.06e-25!102;UBERON:0000924!6.06e-25!102;UBERON:0006601!6.06e-25!102;UBERON:0001049!3.94e-20!52;UBERON:0005068!3.94e-20!52;UBERON:0006241!3.94e-20!52;UBERON:0007135!3.94e-20!52;UBERON:0002346!1.14e-18!71;UBERON:0003075!1.14e-18!71;UBERON:0007284!1.14e-18!71;UBERON:0000955!3.83e-18!50;UBERON:0006238!3.83e-18!50;UBERON:0002616!7.92e-18!49;UBERON:0002020!4.02e-17!34;UBERON:0000033!1.72e-16!63;UBERON:0003080!6.63e-14!40;UBERON:0002791!8.07e-14!29;UBERON:0003528!8.07e-14!29;UBERON:0001893!8.07e-14!29;UBERON:0002780!2.07e-13!39;UBERON:0001890!2.07e-13!39;UBERON:0006240!2.07e-13!39;UBERON:0003056!2.55e-13!49;UBERON:0000956!1.84e-09!21;UBERON:0001869!1.84e-09!21;UBERON:0000203!1.84e-09!21;UBERON:0007811!6.19e-08!86;UBERON:0003076!4.05e-07!12;UBERON:0003057!4.05e-07!12;UBERON:0002619!4.58e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.10e-42,75;UBERON:0001017,1.52e-40,73;UBERON:0004121,6.18e-36,95;UBERON:0000924,6.18e-36,95;UBERON:0006601,6.18e-36,95;UBERON:0000073,6.19e-33,54;UBERON:0001049,6.37e-31,52;UBERON:0005068,6.37e-31,52;UBERON:0006241,6.37e-31,52;UBERON:0007135,6.37e-31,52;UBERON:0002346,4.60e-27,64;UBERON:0003075,4.60e-27,64;UBERON:0007284,4.60e-27,64;UBERON:0002020,4.72e-27,34;UBERON:0002616,1.12e-23,46;UBERON:0010371,2.36e-23,73;UBERON:0000955,5.99e-23,47;UBERON:0006238,5.99e-23,47;UBERON:0003528,8.66e-21,29;UBERON:0002791,8.66e-21,29;UBERON:0001893,8.66e-21,29;UBERON:0003080,8.99e-20,40;UBERON:0002780,7.30e-19,39;UBERON:0001890,7.30e-19,39;UBERON:0006240,7.30e-19,39;UBERON:0003056,2.49e-18,49;UBERON:0010314,9.30e-17,92;UBERON:0000956,1.63e-13,21;UBERON:0001869,1.63e-13,21;UBERON:0000203,1.63e-13,21;UBERON:0003076,5.84e-12,12;UBERON:0003057,5.84e-12,12;UBERON:0002619,3.89e-09,17;UBERON:0000025,6.03e-09,114;UBERON:0002240,7.59e-09,6;UBERON:0005174,7.59e-09,6;UBERON:0001137,7.59e-09,6;UBERON:0002420,1.27e-08,8;UBERON:0007245,1.27e-08,8;UBERON:0010009,1.27e-08,8;UBERON:0010011,1.27e-08,8;UBERON:0000454,1.27e-08,8;UBERON:0004111,3.21e-08,122;UBERON:0000369,5.41e-08,5;UBERON:0002435,5.41e-08,5;UBERON:0000204,5.41e-08,5;UBERON:0010082,5.41e-08,5;UBERON:0011216,5.43e-08,194;UBERON:0001948,9.53e-08,5;UBERON:0002315,9.53e-08,5;UBERON:0001954,2.77e-07,7;UBERON:0003022,2.77e-07,7;UBERON:0002421,2.77e-07,7;UBERON:0000349,2.77e-07,7;UBERON:0002600,2.77e-07,7 | |||
|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0.129123323441576,0,0.234064526321993,0.171217968225505,0,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,1.19060606211498,0.0992909512008853,0,0,0.22940928106717,0,0.430761996159075,0,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0.7813353445238,0,0,0.683045484958446,0.485510353031154,0.125896817975577,0.608261587317087,0.183546752161682,2.34717403304412,2.61630187656536,3.51497892375155,0.972149495371417,0.839918529752175,1.43752564364972,0,0,0,0.771778308107841,1.14613375975503,0,10.3181395038395,3.1739458756322,6.97214543856797,1.69422266034566,0.889294796111139,0.899899717281399,0.988866362566974,0.7104801149461,2.69640099466564,6.53171119046643,5.49554945234932,7.56033254657468,7.57169860864975,6.85562362569129,4.63823935998388,5.75706756310284,5.84657373211242,6.43453150627015,1.10115880999389,3.83062014255563,3.84016333140609,9.10015385338338,11.5274430939036,9.89735404057844,3.62937898701795,0.56276261003168,2.59757021220577,3.83017161115768,4.6982654663704,8.20157561631323,2.12033341332915,1.5870027622425,0,0,0.679971333707751,0,0,0,0,0.170430322578058,0.519572009205738,0.70667914902068,1.26759077799012,0,0,0,0.216491041011214,0.506719730950197,0,0,0,0.148442139064825,0,0.304465478312141,0.691846491768175,0.301445281105245,0.705532242814229,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0,0,0,0.292780797011547,1.04723353406728,0,0.11981512450592,0,0,1.9472783122627,1.83000241127451,12.6910895633993,2.60736480288415,1.79000820131231,1.24672826735736,2.10913641988085,0.611036183101898,0.373220911830279,0.252722758433675,0,0.520481771850815,0.919608417733892,0,0.90422890701429,1.7009124787832,1.40925092313335,1.3118241438362,0,0.862271971731369,0.189106080167819,0,0.876782929710299,0,0,0,0,0.702213187313235,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.350296027101508,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,2.3131894342054,9.77593817603202,0.330418782983798,0,0.213288250535234,0,0.257734922644187,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0,0,0,0,0.350679099451593,0.316182685621286,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.554259570499814,1.13694847062291,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.478364305972461,0,0.690739927463582,0.433947175744535,0,1.08781136763742,0,0.551873492609465,2.40825884981688,2.93029216480508,0.983609672260053,0,0.94652465824877,0.780877488593277,0.861693590931196,1.67278158566786,1.11399337041197,0.283076530788832,2.42886421004937,1.46127928955656,1.18586333383957,0.963963949265421,0,0.35613120733451,0.651547837414304,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0.18006109403131,0.388076051348264,1.07168517515796,0.177340233642274,0.535106452806212,0.658196082408484,1.2178597964584,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0.238744688006273,0,0,3.52308073819968,0,0,0.185194527369712,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0.954670618015114,0.790839983952838,0.406638934253697,0.432021363287205,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0.56369293868419,0.299033092087958,0,0,0.387479470433193,0,0.234714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.308132871494482,0.129920822977795,0.358053391334963,0,0.120195449519969,0,0,0,0.302478555410522,0.0974578807397524,0,0,0,0.887943813496259,0.717710852875806,0,0,0,0.183151624267265,0.214368379079066,0,3.3885110557024,3.68260189205742,1.71868654031819,3.78077001156113,0,0.755393897389701,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,0.415149390336707,0.798049746802062,0.853668028770671,0.972426868273176,0.628839487883947,1.47074806760011,0.666740183404846,0.618105171716683,1.28367683836726,1.26348605881899,0.760437899670719,0.754505365544305,1.31098110457835,1.21647789569252,1.09127391015665,0.952587382566147,0.811190281613988,1.15745532278223,0,0.588795680537589,0.685738504770831,0.887379030796687,0.715308569841963,0.581385666529314,1.41164070622996,0.846146078916765,0.914639864363863,0,0.814824683075171,0.561142271657738,1.89816028998679,1.0835493061312,0.409231043169689,0.619747364743864,0.771626443924566,1.99848462350357,0.467863216890817,0.859484216193193,0.382576664137687,0.441182838239031,0.695603506861264 | |||
|short_description=p3@Arl8a | |||
}} |
Revision as of 20:38, 4 August 2015
Short description: | p3@Arl8a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arl8a_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -78bp_to_ENSMUST00000027684_5end |
EntrezGene: | 68724 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.65e-32 | 44 |
neurectodermal cell | 1.65e-32 | 44 |
neural cell | 1.11e-31 | 43 |
CNS neuron (sensu Vertebrata) | 3.92e-27 | 23 |
neuroblast (sensu Vertebrata) | 3.92e-27 | 23 |
neuron | 4.14e-25 | 33 |
neuronal stem cell | 4.14e-25 | 33 |
neuroblast | 4.14e-25 | 33 |
electrically signaling cell | 4.14e-25 | 33 |
electrically responsive cell | 2.62e-21 | 39 |
electrically active cell | 2.62e-21 | 39 |
embryonic cell | 3.56e-17 | 70 |
neuron of cerebral cortex | 3.60e-09 | 6 |
migratory neural crest cell | 3.19e-07 | 10 |
neuron associated cell | 3.19e-07 | 10 |
glial cell (sensu Vertebrata) | 3.19e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.19e-07 | 10 |
glial cell | 3.19e-07 | 10 |
glioblast | 3.19e-07 | 10 |
glioblast (sensu Vertebrata) | 3.19e-07 | 10 |
somatic stem cell | 7.31e-07 | 91 |
multi fate stem cell | 7.31e-07 | 91 |