FFCP PHASE1:Mm9::chr15:25293275..25293296,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1617|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:25293275..25293296,-|id=chr15:25293275..25293296,-|ontology_enrichment_celltype=CL:0000117!8.37e-15!23;CL:0000337!8.37e-15!23;CL:0000540!1.22e-13!33;CL:0000047!1.22e-13!33;CL:0000031!1.22e-13!33;CL:0000404!1.22e-13!33;CL:0000393!1.83e-12!39;CL:0000211!1.83e-12!39;CL:0002319!2.82e-11!43;CL:0000221!3.16e-11!44;CL:0000133!3.16e-11!44;CL:0000055!3.88e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.28e-31,23;CL:0000337,2.28e-31,23;CL:0000540,2.19e-22,33;CL:0000047,2.19e-22,33;CL:0000031,2.19e-22,33;CL:0000404,2.19e-22,33;CL:0000393,4.37e-18,39;CL:0000211,4.37e-18,39;CL:0002319,6.83e-16,43;CL:0000221,2.09e-15,44;CL:0000133,2.09e-15,44;CL:0002321,1.07e-09,70;CL:0002609,2.62e-08,6;CL:0002612,2.22e-07,3;CL:0002613,3.56e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.38e-21!73;UBERON:0005743!5.38e-21!73;UBERON:0000073!2.98e-20!75;UBERON:0001016!2.98e-20!75;UBERON:0002020!4.07e-20!34;UBERON:0003056!2.53e-18!49;UBERON:0001049!5.28e-18!52;UBERON:0005068!5.28e-18!52;UBERON:0006241!5.28e-18!52;UBERON:0007135!5.28e-18!52;UBERON:0003080!1.55e-17!40;UBERON:0002346!4.45e-17!71;UBERON:0003075!4.45e-17!71;UBERON:0007284!4.45e-17!71;UBERON:0002780!5.61e-17!39;UBERON:0001890!5.61e-17!39;UBERON:0006240!5.61e-17!39;UBERON:0002791!2.70e-16!29;UBERON:0003528!2.70e-16!29;UBERON:0001893!2.70e-16!29;UBERON:0004121!4.11e-15!102;UBERON:0000924!4.11e-15!102;UBERON:0006601!4.11e-15!102;UBERON:0000955!4.17e-15!50;UBERON:0006238!4.17e-15!50;UBERON:0002616!1.03e-14!49;UBERON:0000033!1.89e-14!63;UBERON:0000956!1.48e-12!21;UBERON:0001869!1.48e-12!21;UBERON:0000203!1.48e-12!21;UBERON:0002619!1.35e-10!17;UBERON:0002021!5.93e-09!10;UBERON:0000411!5.93e-09!10;UBERON:0001950!5.93e-09!10;UBERON:0000153!1.98e-08!94;UBERON:0007811!5.94e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.09e-45,34;UBERON:0003528,6.28e-36,29;UBERON:0002791,6.28e-36,29;UBERON:0001893,6.28e-36,29;UBERON:0000073,4.84e-34,54;UBERON:0001049,2.82e-31,52;UBERON:0005068,2.82e-31,52;UBERON:0006241,2.82e-31,52;UBERON:0007135,2.82e-31,52;UBERON:0001017,1.23e-28,73;UBERON:0003080,1.46e-28,40;UBERON:0001016,1.22e-27,75;UBERON:0002780,3.02e-27,39;UBERON:0001890,3.02e-27,39;UBERON:0006240,3.02e-27,39;UBERON:0002346,9.64e-26,64;UBERON:0003075,9.64e-26,64;UBERON:0007284,9.64e-26,64;UBERON:0000956,3.46e-25,21;UBERON:0001869,3.46e-25,21;UBERON:0000203,3.46e-25,21;UBERON:0002619,1.27e-24,17;UBERON:0003056,5.15e-24,49;UBERON:0002616,6.10e-24,46;UBERON:0000955,2.76e-23,47;UBERON:0006238,2.76e-23,47;UBERON:0010371,1.44e-21,73;UBERON:0004121,2.14e-21,95;UBERON:0000924,2.14e-21,95;UBERON:0006601,2.14e-21,95;UBERON:0002021,1.31e-20,10;UBERON:0000411,1.31e-20,10;UBERON:0001950,1.31e-20,10;UBERON:0010314,1.90e-15,92;UBERON:0002420,1.45e-11,8;UBERON:0007245,1.45e-11,8;UBERON:0010009,1.45e-11,8;UBERON:0010011,1.45e-11,8;UBERON:0000454,1.45e-11,8;UBERON:0001948,7.95e-11,5;UBERON:0002315,7.95e-11,5;UBERON:0000025,5.22e-10,114;UBERON:0002240,6.17e-09,6;UBERON:0005174,6.17e-09,6;UBERON:0001137,6.17e-09,6;UBERON:0004111,7.39e-09,122;UBERON:0011216,7.46e-08,194;UBERON:0002950,1.23e-07,4;UBERON:0001891,1.23e-07,4;UBERON:0009616,1.23e-07,4;UBERON:0010286,1.23e-07,4;UBERON:0002257,2.22e-07,3;UBERON:0000369,7.07e-07,5;UBERON:0002435,7.07e-07,5;UBERON:0000204,7.07e-07,5;UBERON:0010082,7.07e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.550640256485045,0,0.218025156380447,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0,0.515672092277442,2.63011399117477,7.93486468908049,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,2.07379224616955,2.8351247049655,0.841299845405528,1.71390590642282,2.42955395046775,1.22490799214954,2.20444583341944,1.83843757322004,0,1.14918604276669,1.0752457327937,3.95658863190582,4.48289453651807,1.56274011167028,1.95428099300967,2.25105044012672,1.06958773443767,3.24091444021034,3.84403538157578,3.35519002485541,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.649473123033642,1.26679932737549,1.51657333504435,0,0,0,0.693941307064543,0,0,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,1.04853447583376,0,1.25654352112864,0.347648640384553,1.27857728665165,0.83115217823824,1.1356888414743,0.407357455401265,0,0.758168275301024,0.210441855886474,0.780722657776222,0.229902104433473,0.360124259610698,1.35634336052144,0.204109497453984,0.2562274405697,0.468508622798644,0,0.646703978798527,0.189106080167819,0.703804496655795,0.657587197282725,1.11218899690239,0,0,0.398068533636986,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,1.05144974282064,1.3377599609307,0,0,0,1.16118335930219,0,0.403367049246685,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.456994050438915,0,0.814605311381257,0.775809948670503,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0.509235257325564,0.234690248288502,0,0,0,0,0.8858587585951,0,0,0,0.289298117163023,1.50791283939272,1.63171705145613,0,0,0,0.117211686592203,0.327869890753351,0,0.631016438832513,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0.809621403349789,1.16902343164525,0,0.642642632843614,0,0.712262414669021,0,0,0,0.242780636154981,0,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.720244376125241,0.517434735131018,0.214337035031592,0,0.535106452806212,0.329098041204242,0,0.704015124191131,0.847328283455281,0,0,0,0,0,0.164140899745061,0,0.370850604021019,0,1.03193433981611,0.555583582109135,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.756037385752609,0.209088296014469,0.436725127492355,0.134864346384821,0,0,0.129614973291793,0,0,0,0.330916980914195,0,0.129159823477731,0.337912250981556,0,1.0416350787516,0.104859344425711,0.483168241652012,0.576060012515731,0,0.608175645870493,0.308132871494482,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0,0,0.358855426437903,0.839423081820392,0,0,0,0,0,4.51801474093653,4.60325236507177,5.72895513439397,9.79563139359019,2.74033007908257,2.2661816921691,1.35004500046361,2.70192721934532,4.07828168085784,2.07104124700728,1.03787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0,0.183843508450014,0.44449345560323,0,0,0.505394423527595,0.25347929989024,0.565879024158229,0.187283014939765,0.192075457214608,0.229741875822453,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.658765662907314,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0|short_description=p@chr15:25293275..25293296,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1617 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:25293275..25293296,- | |||
|description=CAGE_peak_at_chr15:25293275..25293296,- | |||
|id=chr15:25293275..25293296,- | |||
|ontology_enrichment_celltype=CL:0000117!8.37e-15!23;CL:0000337!8.37e-15!23;CL:0000540!1.22e-13!33;CL:0000047!1.22e-13!33;CL:0000031!1.22e-13!33;CL:0000404!1.22e-13!33;CL:0000393!1.83e-12!39;CL:0000211!1.83e-12!39;CL:0002319!2.82e-11!43;CL:0000221!3.16e-11!44;CL:0000133!3.16e-11!44;CL:0000055!3.88e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.28e-31,23;CL:0000337,2.28e-31,23;CL:0000540,2.19e-22,33;CL:0000047,2.19e-22,33;CL:0000031,2.19e-22,33;CL:0000404,2.19e-22,33;CL:0000393,4.37e-18,39;CL:0000211,4.37e-18,39;CL:0002319,6.83e-16,43;CL:0000221,2.09e-15,44;CL:0000133,2.09e-15,44;CL:0002321,1.07e-09,70;CL:0002609,2.62e-08,6;CL:0002612,2.22e-07,3;CL:0002613,3.56e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.38e-21!73;UBERON:0005743!5.38e-21!73;UBERON:0000073!2.98e-20!75;UBERON:0001016!2.98e-20!75;UBERON:0002020!4.07e-20!34;UBERON:0003056!2.53e-18!49;UBERON:0001049!5.28e-18!52;UBERON:0005068!5.28e-18!52;UBERON:0006241!5.28e-18!52;UBERON:0007135!5.28e-18!52;UBERON:0003080!1.55e-17!40;UBERON:0002346!4.45e-17!71;UBERON:0003075!4.45e-17!71;UBERON:0007284!4.45e-17!71;UBERON:0002780!5.61e-17!39;UBERON:0001890!5.61e-17!39;UBERON:0006240!5.61e-17!39;UBERON:0002791!2.70e-16!29;UBERON:0003528!2.70e-16!29;UBERON:0001893!2.70e-16!29;UBERON:0004121!4.11e-15!102;UBERON:0000924!4.11e-15!102;UBERON:0006601!4.11e-15!102;UBERON:0000955!4.17e-15!50;UBERON:0006238!4.17e-15!50;UBERON:0002616!1.03e-14!49;UBERON:0000033!1.89e-14!63;UBERON:0000956!1.48e-12!21;UBERON:0001869!1.48e-12!21;UBERON:0000203!1.48e-12!21;UBERON:0002619!1.35e-10!17;UBERON:0002021!5.93e-09!10;UBERON:0000411!5.93e-09!10;UBERON:0001950!5.93e-09!10;UBERON:0000153!1.98e-08!94;UBERON:0007811!5.94e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.09e-45,34;UBERON:0003528,6.28e-36,29;UBERON:0002791,6.28e-36,29;UBERON:0001893,6.28e-36,29;UBERON:0000073,4.84e-34,54;UBERON:0001049,2.82e-31,52;UBERON:0005068,2.82e-31,52;UBERON:0006241,2.82e-31,52;UBERON:0007135,2.82e-31,52;UBERON:0001017,1.23e-28,73;UBERON:0003080,1.46e-28,40;UBERON:0001016,1.22e-27,75;UBERON:0002780,3.02e-27,39;UBERON:0001890,3.02e-27,39;UBERON:0006240,3.02e-27,39;UBERON:0002346,9.64e-26,64;UBERON:0003075,9.64e-26,64;UBERON:0007284,9.64e-26,64;UBERON:0000956,3.46e-25,21;UBERON:0001869,3.46e-25,21;UBERON:0000203,3.46e-25,21;UBERON:0002619,1.27e-24,17;UBERON:0003056,5.15e-24,49;UBERON:0002616,6.10e-24,46;UBERON:0000955,2.76e-23,47;UBERON:0006238,2.76e-23,47;UBERON:0010371,1.44e-21,73;UBERON:0004121,2.14e-21,95;UBERON:0000924,2.14e-21,95;UBERON:0006601,2.14e-21,95;UBERON:0002021,1.31e-20,10;UBERON:0000411,1.31e-20,10;UBERON:0001950,1.31e-20,10;UBERON:0010314,1.90e-15,92;UBERON:0002420,1.45e-11,8;UBERON:0007245,1.45e-11,8;UBERON:0010009,1.45e-11,8;UBERON:0010011,1.45e-11,8;UBERON:0000454,1.45e-11,8;UBERON:0001948,7.95e-11,5;UBERON:0002315,7.95e-11,5;UBERON:0000025,5.22e-10,114;UBERON:0002240,6.17e-09,6;UBERON:0005174,6.17e-09,6;UBERON:0001137,6.17e-09,6;UBERON:0004111,7.39e-09,122;UBERON:0011216,7.46e-08,194;UBERON:0002950,1.23e-07,4;UBERON:0001891,1.23e-07,4;UBERON:0009616,1.23e-07,4;UBERON:0010286,1.23e-07,4;UBERON:0002257,2.22e-07,3;UBERON:0000369,7.07e-07,5;UBERON:0002435,7.07e-07,5;UBERON:0000204,7.07e-07,5;UBERON:0010082,7.07e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.550640256485045,0,0.218025156380447,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0,0.515672092277442,2.63011399117477,7.93486468908049,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,2.07379224616955,2.8351247049655,0.841299845405528,1.71390590642282,2.42955395046775,1.22490799214954,2.20444583341944,1.83843757322004,0,1.14918604276669,1.0752457327937,3.95658863190582,4.48289453651807,1.56274011167028,1.95428099300967,2.25105044012672,1.06958773443767,3.24091444021034,3.84403538157578,3.35519002485541,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.649473123033642,1.26679932737549,1.51657333504435,0,0,0,0.693941307064543,0,0,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,1.04853447583376,0,1.25654352112864,0.347648640384553,1.27857728665165,0.83115217823824,1.1356888414743,0.407357455401265,0,0.758168275301024,0.210441855886474,0.780722657776222,0.229902104433473,0.360124259610698,1.35634336052144,0.204109497453984,0.2562274405697,0.468508622798644,0,0.646703978798527,0.189106080167819,0.703804496655795,0.657587197282725,1.11218899690239,0,0,0.398068533636986,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,1.05144974282064,1.3377599609307,0,0,0,1.16118335930219,0,0.403367049246685,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.456994050438915,0,0.814605311381257,0.775809948670503,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0.509235257325564,0.234690248288502,0,0,0,0,0.8858587585951,0,0,0,0.289298117163023,1.50791283939272,1.63171705145613,0,0,0,0.117211686592203,0.327869890753351,0,0.631016438832513,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0.809621403349789,1.16902343164525,0,0.642642632843614,0,0.712262414669021,0,0,0,0.242780636154981,0,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.720244376125241,0.517434735131018,0.214337035031592,0,0.535106452806212,0.329098041204242,0,0.704015124191131,0.847328283455281,0,0,0,0,0,0.164140899745061,0,0.370850604021019,0,1.03193433981611,0.555583582109135,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.756037385752609,0.209088296014469,0.436725127492355,0.134864346384821,0,0,0.129614973291793,0,0,0,0.330916980914195,0,0.129159823477731,0.337912250981556,0,1.0416350787516,0.104859344425711,0.483168241652012,0.576060012515731,0,0.608175645870493,0.308132871494482,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0,0,0,0.358855426437903,0.839423081820392,0,0,0,0,0,4.51801474093653,4.60325236507177,5.72895513439397,9.79563139359019,2.74033007908257,2.2661816921691,1.35004500046361,2.70192721934532,4.07828168085784,2.07104124700728,1.03787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0,0.183843508450014,0.44449345560323,0,0,0.505394423527595,0.25347929989024,0.565879024158229,0.187283014939765,0.192075457214608,0.229741875822453,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.658765662907314,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p@chr15:25293275..25293296,- | |||
}} |
Latest revision as of 02:54, 5 August 2015
Short description: | p@chr15:25293275..25293296, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:25293275..25293296, - |
Coexpression cluster: | MCL_coexpression_mm9:1617 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.28e-31 | 23 |
neuroblast (sensu Vertebrata) | 2.28e-31 | 23 |
neuron | 2.19e-22 | 33 |
neuronal stem cell | 2.19e-22 | 33 |
neuroblast | 2.19e-22 | 33 |
electrically signaling cell | 2.19e-22 | 33 |
electrically responsive cell | 4.37e-18 | 39 |
electrically active cell | 4.37e-18 | 39 |
neural cell | 6.83e-16 | 43 |
ectodermal cell | 2.09e-15 | 44 |
neurectodermal cell | 2.09e-15 | 44 |
embryonic cell | 1.07e-09 | 70 |
neuron of cerebral cortex | 2.62e-08 | 6 |
neuron of the ventral spinal cord | 2.22e-07 | 3 |
striatum neuron | 3.56e-07 | 3 |