FFCP PHASE1:Mm9::chr4:15076088..15076099,-: Difference between revisions
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{{FFCP|EntrezGene=69352|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=8bp_to_ENSMUST00000141105_5end|description=CAGE_peak_4_at_Necab1_5end|id=chr4:15076088..15076099,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,5.66e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.14e-15!71;UBERON:0003075!1.14e-15!71;UBERON:0007284!1.14e-15!71;UBERON:0000033!3.85e-13!63;UBERON:0001049!6.77e-13!52;UBERON:0005068!6.77e-13!52;UBERON:0006241!6.77e-13!52;UBERON:0007135!6.77e-13!52;UBERON:0000955!7.90e-13!50;UBERON:0006238!7.90e-13!50;UBERON:0002616!4.30e-12!49;UBERON:0004121!5.82e-12!102;UBERON:0000924!5.82e-12!102;UBERON:0006601!5.82e-12!102;UBERON:0002020!2.52e-11!34;UBERON:0000073!4.27e-11!75;UBERON:0001016!4.27e-11!75;UBERON:0001017!1.36e-10!73;UBERON:0005743!1.36e-10!73;UBERON:0003056!1.83e-10!49;UBERON:0000025!3.05e-09!114;UBERON:0002021!3.36e-09!10;UBERON:0000411!3.36e-09!10;UBERON:0001950!3.36e-09!10;UBERON:0002791!3.48e-09!29;UBERON:0003528!3.48e-09!29;UBERON:0001893!3.48e-09!29;UBERON:0003080!7.34e-09!40;UBERON:0004111!9.48e-09!122;UBERON:0002780!3.10e-08!39;UBERON:0001890!3.10e-08!39;UBERON:0006240!3.10e-08!39;UBERON:0002107!6.42e-07!22;UBERON:0007499!6.42e-07!22;UBERON:0006925!6.42e-07!22;UBERON:0009497!6.42e-07!22;UBERON:0000015!6.42e-07!22;UBERON:0002423!6.42e-07!22;UBERON:0006235!6.42e-07!22;UBERON:0008835!6.42e-07!22;UBERON:0003894!6.42e-07!22;UBERON:0004161!6.42e-07!22;UBERON:0008836!6.42e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.98e-25,54;UBERON:0000955,2.63e-23,47;UBERON:0006238,2.63e-23,47;UBERON:0001049,6.60e-22,52;UBERON:0005068,6.60e-22,52;UBERON:0006241,6.60e-22,52;UBERON:0007135,6.60e-22,52;UBERON:0002616,1.12e-21,46;UBERON:0002346,3.74e-21,64;UBERON:0003075,3.74e-21,64;UBERON:0007284,3.74e-21,64;UBERON:0001017,1.21e-19,73;UBERON:0002021,1.91e-19,10;UBERON:0000411,1.91e-19,10;UBERON:0001950,1.91e-19,10;UBERON:0001016,6.55e-19,75;UBERON:0003528,2.04e-18,29;UBERON:0002791,2.04e-18,29;UBERON:0001893,2.04e-18,29;UBERON:0003056,4.35e-18,49;UBERON:0003080,1.30e-17,40;UBERON:0010371,1.30e-17,73;UBERON:0004121,7.49e-17,95;UBERON:0000924,7.49e-17,95;UBERON:0006601,7.49e-17,95;UBERON:0000025,8.46e-17,114;UBERON:0002020,8.90e-17,34;UBERON:0002780,3.49e-16,39;UBERON:0001890,3.49e-16,39;UBERON:0006240,3.49e-16,39;UBERON:0004111,4.15e-15,122;UBERON:0010314,1.93e-13,92;UBERON:0002619,6.52e-13,17;UBERON:0000956,3.91e-12,21;UBERON:0001869,3.91e-12,21;UBERON:0000203,3.91e-12,21;UBERON:0000483,3.06e-10,174;UBERON:0000119,5.12e-10,176;UBERON:0011216,2.99e-09,194;UBERON:0002107,3.08e-08,22;UBERON:0007499,3.08e-08,22;UBERON:0006925,3.08e-08,22;UBERON:0009497,3.08e-08,22;UBERON:0000015,3.08e-08,22;UBERON:0002423,3.08e-08,22;UBERON:0006235,3.08e-08,22;UBERON:0008835,3.08e-08,22;UBERON:0003894,3.08e-08,22;UBERON:0004161,3.08e-08,22;UBERON:0008836,3.08e-08,22;UBERON:0002950,6.79e-08,4;UBERON:0001891,6.79e-08,4;UBERON:0009616,6.79e-08,4;UBERON:0010286,6.79e-08,4;UBERON:0009854,8.80e-08,23;UBERON:0009856,8.80e-08,23;UBERON:0002420,1.23e-07,8;UBERON:0007245,1.23e-07,8;UBERON:0010009,1.23e-07,8;UBERON:0010011,1.23e-07,8;UBERON:0000454,1.23e-07,8;UBERON:0002365,5.55e-07,25;UBERON:0002330,5.55e-07,25;UBERON:0004684,5.66e-07,3;UBERON:0002275,5.66e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.441737081903227,0,0.0958454710182364,0,2.20231761998777,6.38436690425939,4.30098293117482,0,0.274462930807229,1.04182674111352,1.11673199600552,3.93933827022176,1.37518422999129,0.294628585473668,1.28134512719193,0.372798891650601,0.151452386666368,0.377857800533928,0,6.0229671388697,1.3599426674155,5.39703191637817,3.24888208723835,3.58421509677868,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,1.03909497345377,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0,0,0,1.75668478206928,2.09446706813455,0.255457055208591,0,0,0,5.24267237916879,5.03250663100489,1.13088916901578,7.47444576826789,3.58001640262463,6.85700547046548,4.38051410282946,0,0,0,0.631325567659422,0,0,0,0.753524089178575,0.884474488967262,1.66547836370305,1.3118241438362,3.62184719034622,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,5.25724871410318,0.617427674275707,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,1.48226313543574,0,0,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0,0.324270453550071,1.09824565275233,0,0.744281895337007,1.5601883655728,1.51547326768267,1.61457672169721,1.92977408545347,0,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0,0.3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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69352 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=8bp_to_ENSMUST00000141105_5end | |||
|cluster_id=chr4:15076088..15076099,- | |||
|description=CAGE_peak_4_at_Necab1_5end | |||
|id=chr4:15076088..15076099,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.66e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.14e-15!71;UBERON:0003075!1.14e-15!71;UBERON:0007284!1.14e-15!71;UBERON:0000033!3.85e-13!63;UBERON:0001049!6.77e-13!52;UBERON:0005068!6.77e-13!52;UBERON:0006241!6.77e-13!52;UBERON:0007135!6.77e-13!52;UBERON:0000955!7.90e-13!50;UBERON:0006238!7.90e-13!50;UBERON:0002616!4.30e-12!49;UBERON:0004121!5.82e-12!102;UBERON:0000924!5.82e-12!102;UBERON:0006601!5.82e-12!102;UBERON:0002020!2.52e-11!34;UBERON:0000073!4.27e-11!75;UBERON:0001016!4.27e-11!75;UBERON:0001017!1.36e-10!73;UBERON:0005743!1.36e-10!73;UBERON:0003056!1.83e-10!49;UBERON:0000025!3.05e-09!114;UBERON:0002021!3.36e-09!10;UBERON:0000411!3.36e-09!10;UBERON:0001950!3.36e-09!10;UBERON:0002791!3.48e-09!29;UBERON:0003528!3.48e-09!29;UBERON:0001893!3.48e-09!29;UBERON:0003080!7.34e-09!40;UBERON:0004111!9.48e-09!122;UBERON:0002780!3.10e-08!39;UBERON:0001890!3.10e-08!39;UBERON:0006240!3.10e-08!39;UBERON:0002107!6.42e-07!22;UBERON:0007499!6.42e-07!22;UBERON:0006925!6.42e-07!22;UBERON:0009497!6.42e-07!22;UBERON:0000015!6.42e-07!22;UBERON:0002423!6.42e-07!22;UBERON:0006235!6.42e-07!22;UBERON:0008835!6.42e-07!22;UBERON:0003894!6.42e-07!22;UBERON:0004161!6.42e-07!22;UBERON:0008836!6.42e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.98e-25,54;UBERON:0000955,2.63e-23,47;UBERON:0006238,2.63e-23,47;UBERON:0001049,6.60e-22,52;UBERON:0005068,6.60e-22,52;UBERON:0006241,6.60e-22,52;UBERON:0007135,6.60e-22,52;UBERON:0002616,1.12e-21,46;UBERON:0002346,3.74e-21,64;UBERON:0003075,3.74e-21,64;UBERON:0007284,3.74e-21,64;UBERON:0001017,1.21e-19,73;UBERON:0002021,1.91e-19,10;UBERON:0000411,1.91e-19,10;UBERON:0001950,1.91e-19,10;UBERON:0001016,6.55e-19,75;UBERON:0003528,2.04e-18,29;UBERON:0002791,2.04e-18,29;UBERON:0001893,2.04e-18,29;UBERON:0003056,4.35e-18,49;UBERON:0003080,1.30e-17,40;UBERON:0010371,1.30e-17,73;UBERON:0004121,7.49e-17,95;UBERON:0000924,7.49e-17,95;UBERON:0006601,7.49e-17,95;UBERON:0000025,8.46e-17,114;UBERON:0002020,8.90e-17,34;UBERON:0002780,3.49e-16,39;UBERON:0001890,3.49e-16,39;UBERON:0006240,3.49e-16,39;UBERON:0004111,4.15e-15,122;UBERON:0010314,1.93e-13,92;UBERON:0002619,6.52e-13,17;UBERON:0000956,3.91e-12,21;UBERON:0001869,3.91e-12,21;UBERON:0000203,3.91e-12,21;UBERON:0000483,3.06e-10,174;UBERON:0000119,5.12e-10,176;UBERON:0011216,2.99e-09,194;UBERON:0002107,3.08e-08,22;UBERON:0007499,3.08e-08,22;UBERON:0006925,3.08e-08,22;UBERON:0009497,3.08e-08,22;UBERON:0000015,3.08e-08,22;UBERON:0002423,3.08e-08,22;UBERON:0006235,3.08e-08,22;UBERON:0008835,3.08e-08,22;UBERON:0003894,3.08e-08,22;UBERON:0004161,3.08e-08,22;UBERON:0008836,3.08e-08,22;UBERON:0002950,6.79e-08,4;UBERON:0001891,6.79e-08,4;UBERON:0009616,6.79e-08,4;UBERON:0010286,6.79e-08,4;UBERON:0009854,8.80e-08,23;UBERON:0009856,8.80e-08,23;UBERON:0002420,1.23e-07,8;UBERON:0007245,1.23e-07,8;UBERON:0010009,1.23e-07,8;UBERON:0010011,1.23e-07,8;UBERON:0000454,1.23e-07,8;UBERON:0002365,5.55e-07,25;UBERON:0002330,5.55e-07,25;UBERON:0004684,5.66e-07,3;UBERON:0002275,5.66e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0.441737081903227,0,0.0958454710182364,0,2.20231761998777,6.38436690425939,4.30098293117482,0,0.274462930807229,1.04182674111352,1.11673199600552,3.93933827022176,1.37518422999129,0.294628585473668,1.28134512719193,0.372798891650601,0.151452386666368,0.377857800533928,0,6.0229671388697,1.3599426674155,5.39703191637817,3.24888208723835,3.58421509677868,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,1.03909497345377,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0,0,0,1.75668478206928,2.09446706813455,0.255457055208591,0,0,0,5.24267237916879,5.03250663100489,1.13088916901578,7.47444576826789,3.58001640262463,6.85700547046548,4.38051410282946,0,0,0,0.631325567659422,0,0,0,0.753524089178575,0.884474488967262,1.66547836370305,1.3118241438362,3.62184719034622,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,5.25724871410318,0.617427674275707,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0,1.48226313543574,0,0,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0,0.324270453550071,1.09824565275233,0,0.744281895337007,1.5601883655728,1.51547326768267,1.61457672169721,1.92977408545347,0,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,2.72936002979246,2.22702204525186,0,0,0,0.390438744296638,0.861693590931196,0,0,0,0,0.876767573733936,0,8.9969968598106,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0.608929898229199,0,0,0.220528398054962,0.32977250588296,0,0.0603129249281559,0.119372344003136,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.418176592028937,0,0.134864346384821,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.506868376472335,0.234714477291508,0.13020438484395,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0,0,0,5.0827665835536,4.14292712856459,4.58316410751517,4.29632955859219,1.37016503954128,1.5107877947794,2.70009000092722,6.30449684513909,8.60970577069989,10.3552062350364,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0.64183841918363,0,0.50695859978048,0.188626341386076,0.280924522409647,0.192075457214608,0.34461281373368,0.476293691283074,0,0.192909220463705,0,0.588795680537589,0,0.354951612318675,0,0.145346416632329,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p4@Necab1 | |||
}} |
Revision as of 05:49, 5 August 2015
Short description: | p4@Necab1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Necab1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 8bp_to_ENSMUST00000141105_5end |
EntrezGene: | 69352 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.66e-07 | 3 |