FFCP PHASE1:Mm9::chr18:35000229..35000240,+: Difference between revisions
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{{FFCP|EntrezGene=225362|HGNC=|MCL_coexpression_id=13|UniProt=C1IE02,Q8VCD6|association_with_transcript=-2bp_to_NM_001204914,NM_144865_5end|description=CAGE_peak_3_at_Reep2_5end|id=chr18:35000229..35000240,+|ontology_enrichment_celltype=CL:0000117!2.76e-19!23;CL:0000337!2.76e-19!23;CL:0002319!4.17e-14!43;CL:0000221!1.75e-13!44;CL:0000133!1.75e-13!44;CL:0000540!3.88e-13!33;CL:0000047!3.88e-13!33;CL:0000031!3.88e-13!33;CL:0000404!3.88e-13!33;CL:0000055!2.47e-10!50;CL:0000393!1.71e-09!39;CL:0000211!1.71e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-36,23;CL:0000337,1.98e-36,23;CL:0000540,2.51e-23,33;CL:0000047,2.51e-23,33;CL:0000031,2.51e-23,33;CL:0000404,2.51e-23,33;CL:0000393,1.03e-18,39;CL:0000211,1.03e-18,39;CL:0002319,5.80e-18,43;CL:0000221,2.12e-17,44;CL:0000133,2.12e-17,44;CL:0002609,2.51e-10,6;CL:0002321,1.59e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.67e-30!75;UBERON:0001016!2.67e-30!75;UBERON:0001049!3.63e-30!52;UBERON:0005068!3.63e-30!52;UBERON:0006241!3.63e-30!52;UBERON:0007135!3.63e-30!52;UBERON:0001017!4.22e-30!73;UBERON:0005743!4.22e-30!73;UBERON:0000955!3.91e-28!50;UBERON:0006238!3.91e-28!50;UBERON:0002616!1.76e-27!49;UBERON:0002346!1.32e-26!71;UBERON:0003075!1.32e-26!71;UBERON:0007284!1.32e-26!71;UBERON:0000033!4.54e-26!63;UBERON:0004121!3.75e-24!102;UBERON:0000924!3.75e-24!102;UBERON:0006601!3.75e-24!102;UBERON:0002020!2.14e-22!34;UBERON:0003056!1.48e-20!49;UBERON:0003080!1.88e-20!40;UBERON:0002780!1.52e-19!39;UBERON:0001890!1.52e-19!39;UBERON:0006240!1.52e-19!39;UBERON:0002791!2.05e-18!29;UBERON:0003528!2.05e-18!29;UBERON:0001893!2.05e-18!29;UBERON:0007811!1.79e-13!86;UBERON:0000956!3.93e-12!21;UBERON:0001869!3.93e-12!21;UBERON:0000203!3.93e-12!21;UBERON:0000153!3.22e-11!94;UBERON:0003076!3.04e-10!12;UBERON:0003057!3.04e-10!12;UBERON:0002619!2.81e-09!17;UBERON:0002420!1.22e-07!8;UBERON:0007245!1.22e-07!8;UBERON:0010009!1.22e-07!8;UBERON:0010011!1.22e-07!8;UBERON:0000454!1.22e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.48e-42,54;UBERON:0001049,1.04e-39,52;UBERON:0005068,1.04e-39,52;UBERON:0006241,1.04e-39,52;UBERON:0007135,1.04e-39,52;UBERON:0001017,5.30e-39,73;UBERON:0001016,1.17e-37,75;UBERON:0002020,6.36e-35,34;UBERON:0002346,5.05e-32,64;UBERON:0003075,5.05e-32,64;UBERON:0007284,5.05e-32,64;UBERON:0000955,9.02e-32,47;UBERON:0006238,9.02e-32,47;UBERON:0002616,1.27e-30,46;UBERON:0004121,1.07e-28,95;UBERON:0000924,1.07e-28,95;UBERON:0006601,1.07e-28,95;UBERON:0003528,2.20e-27,29;UBERON:0002791,2.20e-27,29;UBERON:0001893,2.20e-27,29;UBERON:0010371,8.54e-27,73;UBERON:0003080,2.30e-24,40;UBERON:0002780,7.97e-23,39;UBERON:0001890,7.97e-23,39;UBERON:0006240,7.97e-23,39;UBERON:0003056,5.81e-20,49;UBERON:0010314,3.91e-19,92;UBERON:0003076,3.34e-16,12;UBERON:0003057,3.34e-16,12;UBERON:0000956,9.03e-16,21;UBERON:0001869,9.03e-16,21;UBERON:0000203,9.03e-16,21;UBERON:0002420,1.69e-13,8;UBERON:0007245,1.69e-13,8;UBERON:0010009,1.69e-13,8;UBERON:0010011,1.69e-13,8;UBERON:0000454,1.69e-13,8;UBERON:0000025,1.25e-12,114;UBERON:0004111,3.66e-11,122;UBERON:0002619,1.10e-10,17;UBERON:0002240,1.64e-10,6;UBERON:0005174,1.64e-10,6;UBERON:0001137,1.64e-10,6;UBERON:0001948,8.70e-09,5;UBERON:0002315,8.70e-09,5;UBERON:0000369,1.13e-08,5;UBERON:0002435,1.13e-08,5;UBERON:0000204,1.13e-08,5;UBERON:0010082,1.13e-08,5;UBERON:0002950,3.62e-08,4;UBERON:0001891,3.62e-08,4;UBERON:0009616,3.62e-08,4;UBERON:0010286,3.62e-08,4;UBERON:0011216,1.27e-07,194;UBERON:0004733,2.28e-07,6;UBERON:0004732,2.28e-07,6;UBERON:0002028,2.28e-07,6;UBERON:0007277,2.28e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,0.878744730937887,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.83243045203437,3.70293685490423,5.07065122804943,0.338844532069132,0,0,0,0,0.898800331555214,0,2.48855069540346,3.64516033495565,2.10324961351382,2.57085885963423,1.54607978666129,1.5923803897944,1.72521847832825,5.51531271966013,5.50579404996943,1.65993539510744,1.84327839907492,2.2420668914133,2.19570344645783,1.56274011167028,3.07101298901519,3.37657566019008,3.0559649555362,3.24091444021034,1.85083185038834,3.16879057903011,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.520455980298408,0.304465478312141,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,2.63502717310392,2.93225389538837,0,0,0,0,3.89455662452539,2.28750301409313,3.76963056338593,1.39059456153821,0.511430914660661,4.1557608911912,2.27137768294861,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.272145996605311,0.2562274405697,0.281105173679186,1.03481348295606,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,1.05144974282064,2.46971069710283,0,0,0.213288250535234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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:225362 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:C1IE02,uniprot:Q8VCD6 | |||
|association_with_transcript=-2bp_to_NM_001204914,NM_144865_5end | |||
|cluster_id=chr18:35000229..35000240,+ | |||
|description=CAGE_peak_3_at_Reep2_5end | |||
|id=chr18:35000229..35000240,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.76e-19!23;CL:0000337!2.76e-19!23;CL:0002319!4.17e-14!43;CL:0000221!1.75e-13!44;CL:0000133!1.75e-13!44;CL:0000540!3.88e-13!33;CL:0000047!3.88e-13!33;CL:0000031!3.88e-13!33;CL:0000404!3.88e-13!33;CL:0000055!2.47e-10!50;CL:0000393!1.71e-09!39;CL:0000211!1.71e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-36,23;CL:0000337,1.98e-36,23;CL:0000540,2.51e-23,33;CL:0000047,2.51e-23,33;CL:0000031,2.51e-23,33;CL:0000404,2.51e-23,33;CL:0000393,1.03e-18,39;CL:0000211,1.03e-18,39;CL:0002319,5.80e-18,43;CL:0000221,2.12e-17,44;CL:0000133,2.12e-17,44;CL:0002609,2.51e-10,6;CL:0002321,1.59e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.67e-30!75;UBERON:0001016!2.67e-30!75;UBERON:0001049!3.63e-30!52;UBERON:0005068!3.63e-30!52;UBERON:0006241!3.63e-30!52;UBERON:0007135!3.63e-30!52;UBERON:0001017!4.22e-30!73;UBERON:0005743!4.22e-30!73;UBERON:0000955!3.91e-28!50;UBERON:0006238!3.91e-28!50;UBERON:0002616!1.76e-27!49;UBERON:0002346!1.32e-26!71;UBERON:0003075!1.32e-26!71;UBERON:0007284!1.32e-26!71;UBERON:0000033!4.54e-26!63;UBERON:0004121!3.75e-24!102;UBERON:0000924!3.75e-24!102;UBERON:0006601!3.75e-24!102;UBERON:0002020!2.14e-22!34;UBERON:0003056!1.48e-20!49;UBERON:0003080!1.88e-20!40;UBERON:0002780!1.52e-19!39;UBERON:0001890!1.52e-19!39;UBERON:0006240!1.52e-19!39;UBERON:0002791!2.05e-18!29;UBERON:0003528!2.05e-18!29;UBERON:0001893!2.05e-18!29;UBERON:0007811!1.79e-13!86;UBERON:0000956!3.93e-12!21;UBERON:0001869!3.93e-12!21;UBERON:0000203!3.93e-12!21;UBERON:0000153!3.22e-11!94;UBERON:0003076!3.04e-10!12;UBERON:0003057!3.04e-10!12;UBERON:0002619!2.81e-09!17;UBERON:0002420!1.22e-07!8;UBERON:0007245!1.22e-07!8;UBERON:0010009!1.22e-07!8;UBERON:0010011!1.22e-07!8;UBERON:0000454!1.22e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.48e-42,54;UBERON:0001049,1.04e-39,52;UBERON:0005068,1.04e-39,52;UBERON:0006241,1.04e-39,52;UBERON:0007135,1.04e-39,52;UBERON:0001017,5.30e-39,73;UBERON:0001016,1.17e-37,75;UBERON:0002020,6.36e-35,34;UBERON:0002346,5.05e-32,64;UBERON:0003075,5.05e-32,64;UBERON:0007284,5.05e-32,64;UBERON:0000955,9.02e-32,47;UBERON:0006238,9.02e-32,47;UBERON:0002616,1.27e-30,46;UBERON:0004121,1.07e-28,95;UBERON:0000924,1.07e-28,95;UBERON:0006601,1.07e-28,95;UBERON:0003528,2.20e-27,29;UBERON:0002791,2.20e-27,29;UBERON:0001893,2.20e-27,29;UBERON:0010371,8.54e-27,73;UBERON:0003080,2.30e-24,40;UBERON:0002780,7.97e-23,39;UBERON:0001890,7.97e-23,39;UBERON:0006240,7.97e-23,39;UBERON:0003056,5.81e-20,49;UBERON:0010314,3.91e-19,92;UBERON:0003076,3.34e-16,12;UBERON:0003057,3.34e-16,12;UBERON:0000956,9.03e-16,21;UBERON:0001869,9.03e-16,21;UBERON:0000203,9.03e-16,21;UBERON:0002420,1.69e-13,8;UBERON:0007245,1.69e-13,8;UBERON:0010009,1.69e-13,8;UBERON:0010011,1.69e-13,8;UBERON:0000454,1.69e-13,8;UBERON:0000025,1.25e-12,114;UBERON:0004111,3.66e-11,122;UBERON:0002619,1.10e-10,17;UBERON:0002240,1.64e-10,6;UBERON:0005174,1.64e-10,6;UBERON:0001137,1.64e-10,6;UBERON:0001948,8.70e-09,5;UBERON:0002315,8.70e-09,5;UBERON:0000369,1.13e-08,5;UBERON:0002435,1.13e-08,5;UBERON:0000204,1.13e-08,5;UBERON:0010082,1.13e-08,5;UBERON:0002950,3.62e-08,4;UBERON:0001891,3.62e-08,4;UBERON:0009616,3.62e-08,4;UBERON:0010286,3.62e-08,4;UBERON:0011216,1.27e-07,194;UBERON:0004733,2.28e-07,6;UBERON:0004732,2.28e-07,6;UBERON:0002028,2.28e-07,6;UBERON:0007277,2.28e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,0.878744730937887,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.83243045203437,3.70293685490423,5.07065122804943,0.338844532069132,0,0,0,0,0.898800331555214,0,2.48855069540346,3.64516033495565,2.10324961351382,2.57085885963423,1.54607978666129,1.5923803897944,1.72521847832825,5.51531271966013,5.50579404996943,1.65993539510744,1.84327839907492,2.2420668914133,2.19570344645783,1.56274011167028,3.07101298901519,3.37657566019008,3.0559649555362,3.24091444021034,1.85083185038834,3.16879057903011,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.520455980298408,0.304465478312141,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,2.63502717310392,2.93225389538837,0,0,0,0,3.89455662452539,2.28750301409313,3.76963056338593,1.39059456153821,0.511430914660661,4.1557608911912,2.27137768294861,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.272145996605311,0.2562274405697,0.281105173679186,1.03481348295606,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,1.05144974282064,2.46971069710283,0,0,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,3.16471553798949,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,1.28528526568723,0,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0.608929898229199,0.23467170806371,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25477175473676,0.149516546043979,0.496375471371293,1.16670713006429,0.904118764344118,0.844780627453891,1.40828686374905,1.0416350787516,1.25831213310853,2.17425708743405,2.01621004380506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,1.84130094602871,1.14579102687879,2.06223818812425,0,0.755393897389701,1.35004500046361,1.35096360967266,1.35942722695261,1.55328093525546,0,0,0.170733605754134,0.243106717068294,0.628839487883947,0.919217542250071,0.666740183404846,0.206035057238894,0,0.758091635291392,0.760437899670719,0,0.749132059759059,0.512201219238954,0.287177344778066,0.952587382566147,0.115884325944855,0.77163688185482,0,0.441596760403192,0,0.887379030796687,0,0.290692833264657,0.376437521661322,0.338458431566706,0.548783918618318,0.526139422875686,0.271608227691724,1.12228454331548,1.18635018124174,0.591026894253381,0.409231043169689,0.464810523557898,0.578719832943424,1.49886346762768,0,0.644613162144895,0.382576664137687,0,0 | |||
|short_description=p3@Reep2 | |||
}} |
Revision as of 16:13, 5 August 2015
Short description: | p3@Reep2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Reep2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -2bp_to_NM_001204914, NM_144865_5end |
EntrezGene: | 225362 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.98e-36 | 23 |
neuroblast (sensu Vertebrata) | 1.98e-36 | 23 |
neuron | 2.51e-23 | 33 |
neuronal stem cell | 2.51e-23 | 33 |
neuroblast | 2.51e-23 | 33 |
electrically signaling cell | 2.51e-23 | 33 |
electrically responsive cell | 1.03e-18 | 39 |
electrically active cell | 1.03e-18 | 39 |
neural cell | 5.80e-18 | 43 |
ectodermal cell | 2.12e-17 | 44 |
neurectodermal cell | 2.12e-17 | 44 |
neuron of cerebral cortex | 2.51e-10 | 6 |
embryonic cell | 1.59e-08 | 70 |