FFCP PHASE1:Mm9::chr18:35374697..35374721,-: Difference between revisions
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{{FFCP|EntrezGene=107065|HGNC=|MCL_coexpression_id=1|UniProt=Q8BGA3,Q8C8L1|association_with_transcript=-19bp_to_ENSMUST00000091636,NM_178005,uc008ema.1_5end|description=CAGE_peak_2_at_Lrrtm2_5end|id=chr18:35374697..35374721,-|ontology_enrichment_celltype=CL:0000540!6.31e-16!33;CL:0000047!6.31e-16!33;CL:0000031!6.31e-16!33;CL:0000404!6.31e-16!33;CL:0000117!1.43e-15!23;CL:0000337!1.43e-15!23;CL:0000393!1.27e-11!39;CL:0000211!1.27e-11!39;CL:0000221!9.94e-11!44;CL:0000133!9.94e-11!44;CL:0002319!1.26e-10!43;CL:0000055!1.36e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.76e-21,23;CL:0000337,3.76e-21,23;CL:0000540,1.69e-14,33;CL:0000047,1.69e-14,33;CL:0000031,1.69e-14,33;CL:0000404,1.69e-14,33;CL:0000393,2.10e-11,39;CL:0000211,2.10e-11,39;CL:0002319,7.78e-10,43;CL:0000221,1.72e-09,44;CL:0000133,1.72e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.41e-29!71;UBERON:0003075!2.41e-29!71;UBERON:0007284!2.41e-29!71;UBERON:0000073!1.10e-28!75;UBERON:0001016!1.10e-28!75;UBERON:0001017!1.46e-28!73;UBERON:0005743!1.46e-28!73;UBERON:0004121!9.27e-27!102;UBERON:0000924!9.27e-27!102;UBERON:0006601!9.27e-27!102;UBERON:0001049!9.85e-25!52;UBERON:0005068!9.85e-25!52;UBERON:0006241!9.85e-25!52;UBERON:0007135!9.85e-25!52;UBERON:0000033!4.10e-24!63;UBERON:0000955!1.08e-23!50;UBERON:0006238!1.08e-23!50;UBERON:0002616!7.02e-23!49;UBERON:0002020!2.76e-21!34;UBERON:0003056!4.35e-21!49;UBERON:0003080!1.30e-18!40;UBERON:0002780!1.01e-17!39;UBERON:0001890!1.01e-17!39;UBERON:0006240!1.01e-17!39;UBERON:0002791!1.01e-17!29;UBERON:0003528!1.01e-17!29;UBERON:0001893!1.01e-17!29;UBERON:0007811!8.61e-13!86;UBERON:0000956!2.80e-12!21;UBERON:0001869!2.80e-12!21;UBERON:0000203!2.80e-12!21;UBERON:0000153!4.02e-11!94;UBERON:0002619!2.69e-10!17;UBERON:0002021!1.32e-09!10;UBERON:0000411!1.32e-09!10;UBERON:0001950!1.32e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.33e-40,54;UBERON:0001017,5.16e-37,73;UBERON:0001049,1.09e-36,52;UBERON:0005068,1.09e-36,52;UBERON:0006241,1.09e-36,52;UBERON:0007135,1.09e-36,52;UBERON:0001016,1.09e-35,75;UBERON:0002020,1.23e-32,34;UBERON:0002346,1.28e-32,64;UBERON:0003075,1.28e-32,64;UBERON:0007284,1.28e-32,64;UBERON:0000955,2.40e-30,47;UBERON:0006238,2.40e-30,47;UBERON:0002616,5.57e-29,46;UBERON:0004121,3.70e-28,95;UBERON:0000924,3.70e-28,95;UBERON:0006601,3.70e-28,95;UBERON:0010371,3.56e-27,73;UBERON:0003528,2.94e-26,29;UBERON:0002791,2.94e-26,29;UBERON:0001893,2.94e-26,29;UBERON:0003080,5.86e-25,40;UBERON:0002780,1.81e-23,39;UBERON:0001890,1.81e-23,39;UBERON:0006240,1.81e-23,39;UBERON:0003056,9.02e-22,49;UBERON:0010314,3.31e-19,92;UBERON:0000956,1.27e-16,21;UBERON:0001869,1.27e-16,21;UBERON:0000203,1.27e-16,21;UBERON:0002619,1.57e-16,17;UBERON:0002021,2.94e-16,10;UBERON:0000411,2.94e-16,10;UBERON:0001950,2.94e-16,10;UBERON:0003076,5.84e-12,12;UBERON:0003057,5.84e-12,12;UBERON:0002420,5.59e-11,8;UBERON:0007245,5.59e-11,8;UBERON:0010009,5.59e-11,8;UBERON:0010011,5.59e-11,8;UBERON:0000454,5.59e-11,8;UBERON:0000025,6.38e-11,114;UBERON:0004111,1.52e-09,122;UBERON:0002240,7.10e-09,6;UBERON:0005174,7.10e-09,6;UBERON:0001137,7.10e-09,6;UBERON:0001948,1.60e-07,5;UBERON:0002315,1.60e-07,5;UBERON:0000369,3.52e-07,5;UBERON:0002435,3.52e-07,5;UBERON:0000204,3.52e-07,5;UBERON:0010082,3.52e-07,5;UBERON:0002950,5.33e-07,4;UBERON:0001891,5.33e-07,4;UBERON:0009616,5.33e-07,4;UBERON:0010286,5.33e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,3.1739458756322,1.26766280701236,0,0,0,0,0,0,0,1.45165457231869,0.540023753326763,0.841299845405528,2.57085885963423,2.65042249141936,1.5923803897944,0.862609239164127,1.83843757322004,11.0115880999389,11.4918604276669,12.595735727012,1.58263545276233,1.00636407962651,2.6045668527838,6.42120897703176,8.4414391504752,9.0150966188318,9.1334861496837,7.40332740155335,2.23679334990361,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.346970653532272,0.304465478312141,0,0.150722640552623,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,14.0534782565543,10.4723353406728,0,0.239630249011841,0,0.127070227073065,13.9305294646485,12.8100168789215,6.15706325353036,9.21268897019065,8.43861009190091,12.259494629014,10.2211995732687,0,0,0,0.631325567659422,0,0.919608417733892,1.0803727788321,0.753524089178575,0.748401490664606,0.2562274405697,0.468508622798644,1.29351685369508,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5144974282064,4.52780294468852,0,0,0,0.232236671860439,0.257734922644187,0.605050573870028,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9174401191699,10.9006868530749,0,0,0.315508219416257,0.780877488593277,1.29254038639679,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0.584511715822624,0,9.63963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,1.70219802876894,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,9.45669040253599,0,0,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0.324016022465404,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,6.7770221114048,10.1271552031579,8.59343270159095,6.70227411140382,13.7016503954128,12.0863023582352,12.1504050041725,13.0593148935024,13.1411298605419,16.0505696643064,0.103787347584177,0,0.682934423016537,0.486213434136588,0.838452650511929,0.551530525350042,0.888986911206461,1.03017528619447,1.60459604795908,1.76888048234658,1.2673964994512,1.13175804831646,1.31098110457835,0.832326981263301,0.402048282689293,0.476293691283074,0.463537303779422,0.77163688185482,0,0.883193520806384,0.685738504770831,0.354951612318675,0.476872379894642,1.16277133305863,0.846984423737976,0.761531471025089,1.09756783723664,0.789209134313529,1.22223702461276,1.68342681497322,0.474540072496697,0.197008964751127,1.22769312950907,0.77468420592983,0.578719832943424,1.74867404556562,0.233931608445408,0,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p2@Lrrtm2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:107065 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BGA3,uniprot:Q8C8L1 | |||
|association_with_transcript=-19bp_to_ENSMUST00000091636,NM_178005,uc008ema.1_5end | |||
|cluster_id=chr18:35374697..35374721,- | |||
|description=CAGE_peak_2_at_Lrrtm2_5end | |||
|id=chr18:35374697..35374721,- | |||
|ontology_enrichment_celltype=CL:0000540!6.31e-16!33;CL:0000047!6.31e-16!33;CL:0000031!6.31e-16!33;CL:0000404!6.31e-16!33;CL:0000117!1.43e-15!23;CL:0000337!1.43e-15!23;CL:0000393!1.27e-11!39;CL:0000211!1.27e-11!39;CL:0000221!9.94e-11!44;CL:0000133!9.94e-11!44;CL:0002319!1.26e-10!43;CL:0000055!1.36e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.76e-21,23;CL:0000337,3.76e-21,23;CL:0000540,1.69e-14,33;CL:0000047,1.69e-14,33;CL:0000031,1.69e-14,33;CL:0000404,1.69e-14,33;CL:0000393,2.10e-11,39;CL:0000211,2.10e-11,39;CL:0002319,7.78e-10,43;CL:0000221,1.72e-09,44;CL:0000133,1.72e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.41e-29!71;UBERON:0003075!2.41e-29!71;UBERON:0007284!2.41e-29!71;UBERON:0000073!1.10e-28!75;UBERON:0001016!1.10e-28!75;UBERON:0001017!1.46e-28!73;UBERON:0005743!1.46e-28!73;UBERON:0004121!9.27e-27!102;UBERON:0000924!9.27e-27!102;UBERON:0006601!9.27e-27!102;UBERON:0001049!9.85e-25!52;UBERON:0005068!9.85e-25!52;UBERON:0006241!9.85e-25!52;UBERON:0007135!9.85e-25!52;UBERON:0000033!4.10e-24!63;UBERON:0000955!1.08e-23!50;UBERON:0006238!1.08e-23!50;UBERON:0002616!7.02e-23!49;UBERON:0002020!2.76e-21!34;UBERON:0003056!4.35e-21!49;UBERON:0003080!1.30e-18!40;UBERON:0002780!1.01e-17!39;UBERON:0001890!1.01e-17!39;UBERON:0006240!1.01e-17!39;UBERON:0002791!1.01e-17!29;UBERON:0003528!1.01e-17!29;UBERON:0001893!1.01e-17!29;UBERON:0007811!8.61e-13!86;UBERON:0000956!2.80e-12!21;UBERON:0001869!2.80e-12!21;UBERON:0000203!2.80e-12!21;UBERON:0000153!4.02e-11!94;UBERON:0002619!2.69e-10!17;UBERON:0002021!1.32e-09!10;UBERON:0000411!1.32e-09!10;UBERON:0001950!1.32e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.33e-40,54;UBERON:0001017,5.16e-37,73;UBERON:0001049,1.09e-36,52;UBERON:0005068,1.09e-36,52;UBERON:0006241,1.09e-36,52;UBERON:0007135,1.09e-36,52;UBERON:0001016,1.09e-35,75;UBERON:0002020,1.23e-32,34;UBERON:0002346,1.28e-32,64;UBERON:0003075,1.28e-32,64;UBERON:0007284,1.28e-32,64;UBERON:0000955,2.40e-30,47;UBERON:0006238,2.40e-30,47;UBERON:0002616,5.57e-29,46;UBERON:0004121,3.70e-28,95;UBERON:0000924,3.70e-28,95;UBERON:0006601,3.70e-28,95;UBERON:0010371,3.56e-27,73;UBERON:0003528,2.94e-26,29;UBERON:0002791,2.94e-26,29;UBERON:0001893,2.94e-26,29;UBERON:0003080,5.86e-25,40;UBERON:0002780,1.81e-23,39;UBERON:0001890,1.81e-23,39;UBERON:0006240,1.81e-23,39;UBERON:0003056,9.02e-22,49;UBERON:0010314,3.31e-19,92;UBERON:0000956,1.27e-16,21;UBERON:0001869,1.27e-16,21;UBERON:0000203,1.27e-16,21;UBERON:0002619,1.57e-16,17;UBERON:0002021,2.94e-16,10;UBERON:0000411,2.94e-16,10;UBERON:0001950,2.94e-16,10;UBERON:0003076,5.84e-12,12;UBERON:0003057,5.84e-12,12;UBERON:0002420,5.59e-11,8;UBERON:0007245,5.59e-11,8;UBERON:0010009,5.59e-11,8;UBERON:0010011,5.59e-11,8;UBERON:0000454,5.59e-11,8;UBERON:0000025,6.38e-11,114;UBERON:0004111,1.52e-09,122;UBERON:0002240,7.10e-09,6;UBERON:0005174,7.10e-09,6;UBERON:0001137,7.10e-09,6;UBERON:0001948,1.60e-07,5;UBERON:0002315,1.60e-07,5;UBERON:0000369,3.52e-07,5;UBERON:0002435,3.52e-07,5;UBERON:0000204,3.52e-07,5;UBERON:0010082,3.52e-07,5;UBERON:0002950,5.33e-07,4;UBERON:0001891,5.33e-07,4;UBERON:0009616,5.33e-07,4;UBERON:0010286,5.33e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,3.1739458756322,1.26766280701236,0,0,0,0,0,0,0,1.45165457231869,0.540023753326763,0.841299845405528,2.57085885963423,2.65042249141936,1.5923803897944,0.862609239164127,1.83843757322004,11.0115880999389,11.4918604276669,12.595735727012,1.58263545276233,1.00636407962651,2.6045668527838,6.42120897703176,8.4414391504752,9.0150966188318,9.1334861496837,7.40332740155335,2.23679334990361,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.346970653532272,0.304465478312141,0,0.150722640552623,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,14.0534782565543,10.4723353406728,0,0.239630249011841,0,0.127070227073065,13.9305294646485,12.8100168789215,6.15706325353036,9.21268897019065,8.43861009190091,12.259494629014,10.2211995732687,0,0,0,0.631325567659422,0,0.919608417733892,1.0803727788321,0.753524089178575,0.748401490664606,0.2562274405697,0.468508622798644,1.29351685369508,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5144974282064,4.52780294468852,0,0,0,0.232236671860439,0.257734922644187,0.605050573870028,0,0,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9174401191699,10.9006868530749,0,0,0.315508219416257,0.780877488593277,1.29254038639679,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0.584511715822624,0,9.63963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,1.70219802876894,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,9.45669040253599,0,0,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0.324016022465404,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,6.7770221114048,10.1271552031579,8.59343270159095,6.70227411140382,13.7016503954128,12.0863023582352,12.1504050041725,13.0593148935024,13.1411298605419,16.0505696643064,0.103787347584177,0,0.682934423016537,0.486213434136588,0.838452650511929,0.551530525350042,0.888986911206461,1.03017528619447,1.60459604795908,1.76888048234658,1.2673964994512,1.13175804831646,1.31098110457835,0.832326981263301,0.402048282689293,0.476293691283074,0.463537303779422,0.77163688185482,0,0.883193520806384,0.685738504770831,0.354951612318675,0.476872379894642,1.16277133305863,0.846984423737976,0.761531471025089,1.09756783723664,0.789209134313529,1.22223702461276,1.68342681497322,0.474540072496697,0.197008964751127,1.22769312950907,0.77468420592983,0.578719832943424,1.74867404556562,0.233931608445408,0,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Lrrtm2 | |||
}} |
Revision as of 16:32, 5 August 2015
Short description: | p2@Lrrtm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lrrtm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -19bp_to_ENSMUST00000091636, NM_178005, uc008ema.1_5end |
EntrezGene: | 107065 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.76e-21 | 23 |
neuroblast (sensu Vertebrata) | 3.76e-21 | 23 |
neuron | 1.69e-14 | 33 |
neuronal stem cell | 1.69e-14 | 33 |
neuroblast | 1.69e-14 | 33 |
electrically signaling cell | 1.69e-14 | 33 |
electrically responsive cell | 2.10e-11 | 39 |
electrically active cell | 2.10e-11 | 39 |
neural cell | 7.78e-10 | 43 |
ectodermal cell | 1.72e-09 | 44 |
neurectodermal cell | 1.72e-09 | 44 |