FFCP PHASE1:Mm9::chr4:86876395..86876405,-: Difference between revisions
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{{FFCP|EntrezGene=76376|HGNC=|MCL_coexpression_id=1|UniProt=Q8BUN9|association_with_transcript=-14bp_to_ENSMUST00000107157_5end|description=CAGE_peak_3_at_Slc24a2_5end|id=chr4:86876395..86876405,-|ontology_enrichment_celltype=CL:0000117!4.73e-12!23;CL:0000337!4.73e-12!23;CL:0000540!7.68e-09!33;CL:0000047!7.68e-09!33;CL:0000031!7.68e-09!33;CL:0000404!7.68e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,5.70e-09,23;CL:0000337,5.70e-09,23;CL:0002614,2.03e-08,3;CL:0002610,3.05e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.19e-27!52;UBERON:0005068!2.19e-27!52;UBERON:0006241!2.19e-27!52;UBERON:0007135!2.19e-27!52;UBERON:0001017!2.29e-26!73;UBERON:0005743!2.29e-26!73;UBERON:0000955!1.07e-25!50;UBERON:0006238!1.07e-25!50;UBERON:0000073!3.02e-25!75;UBERON:0001016!3.02e-25!75;UBERON:0002616!1.15e-24!49;UBERON:0002346!4.22e-24!71;UBERON:0003075!4.22e-24!71;UBERON:0007284!4.22e-24!71;UBERON:0002020!1.22e-22!34;UBERON:0000033!4.91e-22!63;UBERON:0004121!1.05e-20!102;UBERON:0000924!1.05e-20!102;UBERON:0006601!1.05e-20!102;UBERON:0003080!4.91e-19!40;UBERON:0002780!4.00e-18!39;UBERON:0001890!4.00e-18!39;UBERON:0006240!4.00e-18!39;UBERON:0002791!6.20e-18!29;UBERON:0003528!6.20e-18!29;UBERON:0001893!6.20e-18!29;UBERON:0003056!6.43e-18!49;UBERON:0007811!1.45e-13!86;UBERON:0002021!1.78e-13!10;UBERON:0000411!1.78e-13!10;UBERON:0001950!1.78e-13!10;UBERON:0000025!6.69e-13!114;UBERON:0002619!9.84e-13!17;UBERON:0000956!2.00e-12!21;UBERON:0001869!2.00e-12!21;UBERON:0000203!2.00e-12!21;UBERON:0000153!4.45e-12!94;UBERON:0004111!4.23e-11!122;UBERON:0003076!6.49e-09!12;UBERON:0003057!6.49e-09!12;UBERON:0002298!7.02e-08!6;UBERON:0002240!3.64e-07!6;UBERON:0005174!3.64e-07!6;UBERON:0001137!3.64e-07!6;UBERON:0002420!9.04e-07!8;UBERON:0007245!9.04e-07!8;UBERON:0010009!9.04e-07!8;UBERON:0010011!9.04e-07!8;UBERON:0000454!9.04e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.03e-38,54;UBERON:0001049,1.58e-34,52;UBERON:0005068,1.58e-34,52;UBERON:0006241,1.58e-34,52;UBERON:0007135,1.58e-34,52;UBERON:0001017,3.58e-31,73;UBERON:0001016,3.57e-30,75;UBERON:0000955,4.29e-28,47;UBERON:0006238,4.29e-28,47;UBERON:0002020,1.55e-27,34;UBERON:0002021,5.92e-27,10;UBERON:0000411,5.92e-27,10;UBERON:0001950,5.92e-27,10;UBERON:0002346,6.15e-27,64;UBERON:0003075,6.15e-27,64;UBERON:0007284,6.15e-27,64;UBERON:0002616,2.60e-26,46;UBERON:0010371,7.05e-23,73;UBERON:0004121,1.75e-22,95;UBERON:0000924,1.75e-22,95;UBERON:0006601,1.75e-22,95;UBERON:0003528,2.62e-21,29;UBERON:0002791,2.62e-21,29;UBERON:0001893,2.62e-21,29;UBERON:0003080,1.08e-20,40;UBERON:0002780,3.90e-19,39;UBERON:0001890,3.90e-19,39;UBERON:0006240,3.90e-19,39;UBERON:0010314,2.52e-18,92;UBERON:0002619,3.12e-18,17;UBERON:0000956,4.06e-17,21;UBERON:0001869,4.06e-17,21;UBERON:0000203,4.06e-17,21;UBERON:0003056,4.49e-16,49;UBERON:0003076,4.60e-15,12;UBERON:0003057,4.60e-15,12;UBERON:0000025,1.34e-13,114;UBERON:0004111,2.67e-12,122;UBERON:0002950,2.24e-10,4;UBERON:0001891,2.24e-10,4;UBERON:0009616,2.24e-10,4;UBERON:0010286,2.24e-10,4;UBERON:0002240,7.46e-10,6;UBERON:0005174,7.46e-10,6;UBERON:0001137,7.46e-10,6;UBERON:0002038,2.03e-08,3;UBERON:0009663,2.03e-08,3;UBERON:0009661,2.03e-08,3;UBERON:0000125,2.03e-08,3;UBERON:0002308,2.03e-08,3;UBERON:0004684,3.05e-08,3;UBERON:0002275,3.05e-08,3;UBERON:0011216,1.15e-07,194;UBERON:0001948,1.17e-07,5;UBERON:0002315,1.17e-07,5;UBERON:0004733,7.00e-07,6;UBERON:0004732,7.00e-07,6;UBERON:0002028,7.00e-07,6;UBERON:0007277,7.00e-07,6;UBERON:0000483,9.10e-07,174|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,3.42781181284564,1.54607978666129,0.244981598429908,0.0958454710182364,0,3.30347642998166,6.76742891851495,8.29475279583715,0.395658863190582,0.182975287204819,0,11.4465029590566,3.93933827022176,4.5839474333043,2.06240009831567,3.27454865837937,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.593768556259299,0,0,0,0,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,2.92780797011547,3.35114730901528,0,0,0,0,2.09706895166752,11.8950156732843,0.251308704225729,10.081810571152,12.0186264945255,6.64921742590592,7.30085683804909,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,1.42046841351126,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0,0,0,11.1453672738987,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,8.67366480782304,0,0,0,0,0,0,0,0.283076530788832,0,0,0.395287777946524,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76376 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BUN9 | |||
|association_with_transcript=-14bp_to_ENSMUST00000107157_5end | |||
|cluster_id=chr4:86876395..86876405,- | |||
|description=CAGE_peak_3_at_Slc24a2_5end | |||
|id=chr4:86876395..86876405,- | |||
|ontology_enrichment_celltype=CL:0000117!4.73e-12!23;CL:0000337!4.73e-12!23;CL:0000540!7.68e-09!33;CL:0000047!7.68e-09!33;CL:0000031!7.68e-09!33;CL:0000404!7.68e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.70e-09,23;CL:0000337,5.70e-09,23;CL:0002614,2.03e-08,3;CL:0002610,3.05e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.19e-27!52;UBERON:0005068!2.19e-27!52;UBERON:0006241!2.19e-27!52;UBERON:0007135!2.19e-27!52;UBERON:0001017!2.29e-26!73;UBERON:0005743!2.29e-26!73;UBERON:0000955!1.07e-25!50;UBERON:0006238!1.07e-25!50;UBERON:0000073!3.02e-25!75;UBERON:0001016!3.02e-25!75;UBERON:0002616!1.15e-24!49;UBERON:0002346!4.22e-24!71;UBERON:0003075!4.22e-24!71;UBERON:0007284!4.22e-24!71;UBERON:0002020!1.22e-22!34;UBERON:0000033!4.91e-22!63;UBERON:0004121!1.05e-20!102;UBERON:0000924!1.05e-20!102;UBERON:0006601!1.05e-20!102;UBERON:0003080!4.91e-19!40;UBERON:0002780!4.00e-18!39;UBERON:0001890!4.00e-18!39;UBERON:0006240!4.00e-18!39;UBERON:0002791!6.20e-18!29;UBERON:0003528!6.20e-18!29;UBERON:0001893!6.20e-18!29;UBERON:0003056!6.43e-18!49;UBERON:0007811!1.45e-13!86;UBERON:0002021!1.78e-13!10;UBERON:0000411!1.78e-13!10;UBERON:0001950!1.78e-13!10;UBERON:0000025!6.69e-13!114;UBERON:0002619!9.84e-13!17;UBERON:0000956!2.00e-12!21;UBERON:0001869!2.00e-12!21;UBERON:0000203!2.00e-12!21;UBERON:0000153!4.45e-12!94;UBERON:0004111!4.23e-11!122;UBERON:0003076!6.49e-09!12;UBERON:0003057!6.49e-09!12;UBERON:0002298!7.02e-08!6;UBERON:0002240!3.64e-07!6;UBERON:0005174!3.64e-07!6;UBERON:0001137!3.64e-07!6;UBERON:0002420!9.04e-07!8;UBERON:0007245!9.04e-07!8;UBERON:0010009!9.04e-07!8;UBERON:0010011!9.04e-07!8;UBERON:0000454!9.04e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.03e-38,54;UBERON:0001049,1.58e-34,52;UBERON:0005068,1.58e-34,52;UBERON:0006241,1.58e-34,52;UBERON:0007135,1.58e-34,52;UBERON:0001017,3.58e-31,73;UBERON:0001016,3.57e-30,75;UBERON:0000955,4.29e-28,47;UBERON:0006238,4.29e-28,47;UBERON:0002020,1.55e-27,34;UBERON:0002021,5.92e-27,10;UBERON:0000411,5.92e-27,10;UBERON:0001950,5.92e-27,10;UBERON:0002346,6.15e-27,64;UBERON:0003075,6.15e-27,64;UBERON:0007284,6.15e-27,64;UBERON:0002616,2.60e-26,46;UBERON:0010371,7.05e-23,73;UBERON:0004121,1.75e-22,95;UBERON:0000924,1.75e-22,95;UBERON:0006601,1.75e-22,95;UBERON:0003528,2.62e-21,29;UBERON:0002791,2.62e-21,29;UBERON:0001893,2.62e-21,29;UBERON:0003080,1.08e-20,40;UBERON:0002780,3.90e-19,39;UBERON:0001890,3.90e-19,39;UBERON:0006240,3.90e-19,39;UBERON:0010314,2.52e-18,92;UBERON:0002619,3.12e-18,17;UBERON:0000956,4.06e-17,21;UBERON:0001869,4.06e-17,21;UBERON:0000203,4.06e-17,21;UBERON:0003056,4.49e-16,49;UBERON:0003076,4.60e-15,12;UBERON:0003057,4.60e-15,12;UBERON:0000025,1.34e-13,114;UBERON:0004111,2.67e-12,122;UBERON:0002950,2.24e-10,4;UBERON:0001891,2.24e-10,4;UBERON:0009616,2.24e-10,4;UBERON:0010286,2.24e-10,4;UBERON:0002240,7.46e-10,6;UBERON:0005174,7.46e-10,6;UBERON:0001137,7.46e-10,6;UBERON:0002038,2.03e-08,3;UBERON:0009663,2.03e-08,3;UBERON:0009661,2.03e-08,3;UBERON:0000125,2.03e-08,3;UBERON:0002308,2.03e-08,3;UBERON:0004684,3.05e-08,3;UBERON:0002275,3.05e-08,3;UBERON:0011216,1.15e-07,194;UBERON:0001948,1.17e-07,5;UBERON:0002315,1.17e-07,5;UBERON:0004733,7.00e-07,6;UBERON:0004732,7.00e-07,6;UBERON:0002028,7.00e-07,6;UBERON:0007277,7.00e-07,6;UBERON:0000483,9.10e-07,174 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,3.42781181284564,1.54607978666129,0.244981598429908,0.0958454710182364,0,3.30347642998166,6.76742891851495,8.29475279583715,0.395658863190582,0.182975287204819,0,11.4465029590566,3.93933827022176,4.5839474333043,2.06240009831567,3.27454865837937,0.372798891650601,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.593768556259299,0,0,0,0,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,2.92780797011547,3.35114730901528,0,0,0,0,2.09706895166752,11.8950156732843,0.251308704225729,10.081810571152,12.0186264945255,6.64921742590592,7.30085683804909,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,1.42046841351126,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0,0,0,11.1453672738987,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,8.67366480782304,0,0,0,0,0,0,0,0.283076530788832,0,0,0.395287777946524,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,7.97328798645192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2950368523413,9.66682996665071,5.72895513439397,13.4045482228076,13.7016503954128,12.0863023582352,7.42524750254986,10.3573876741571,13.1411298605419,11.9084871702919,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.256100609619477,0.114870937911227,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Slc24a2 | |||
}} |
Revision as of 19:13, 5 August 2015
Short description: | p3@Slc24a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc24a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -14bp_to_ENSMUST00000107157_5end |
EntrezGene: | 76376 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.70e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.70e-09 | 23 |
neuron of the substantia nigra | 2.03e-08 | 3 |
raphe nuclei neuron | 3.05e-08 | 3 |