FFCP PHASE1:Mm9::chr1:66221810..66221821,+: Difference between revisions
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{{FFCP|EntrezGene=17756|HGNC=|MCL_coexpression_id=13|UniProt=G3UXY3|association_with_transcript=-25bp_to_ENSMUST00000156636_5end|description=CAGE_peak_16_at_Mtap2_5end|id=chr1:66221810..66221821,+|ontology_enrichment_celltype=CL:0000117!5.60e-18!23;CL:0000337!5.60e-18!23;CL:0000540!2.29e-17!33;CL:0000047!2.29e-17!33;CL:0000031!2.29e-17!33;CL:0000404!2.29e-17!33;CL:0000393!6.32e-15!39;CL:0000211!6.32e-15!39;CL:0000221!6.87e-13!44;CL:0000133!6.87e-13!44;CL:0002319!8.48e-13!43;CL:0000055!7.61e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.71e-39,23;CL:0000337,4.71e-39,23;CL:0000540,4.38e-25,33;CL:0000047,4.38e-25,33;CL:0000031,4.38e-25,33;CL:0000404,4.38e-25,33;CL:0000393,4.95e-22,39;CL:0000211,4.95e-22,39;CL:0002319,1.18e-17,43;CL:0000221,4.24e-17,44;CL:0000133,4.24e-17,44;CL:0002609,1.21e-10,6;CL:0002321,2.95e-09,70;CL:0000120,8.27e-07,3;CL:0002612,9.78e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.27e-30!102;UBERON:0000924!1.27e-30!102;UBERON:0006601!1.27e-30!102;UBERON:0001017!1.82e-28!73;UBERON:0005743!1.82e-28!73;UBERON:0000073!2.74e-28!75;UBERON:0001016!2.74e-28!75;UBERON:0000033!6.86e-27!63;UBERON:0001049!8.25e-25!52;UBERON:0005068!8.25e-25!52;UBERON:0006241!8.25e-25!52;UBERON:0007135!8.25e-25!52;UBERON:0002346!3.82e-24!71;UBERON:0003075!3.82e-24!71;UBERON:0007284!3.82e-24!71;UBERON:0000955!4.03e-23!50;UBERON:0006238!4.03e-23!50;UBERON:0002616!2.02e-22!49;UBERON:0003056!1.38e-20!49;UBERON:0002020!1.24e-19!34;UBERON:0003080!2.18e-18!40;UBERON:0002780!9.88e-18!39;UBERON:0001890!9.88e-18!39;UBERON:0006240!9.88e-18!39;UBERON:0002791!8.93e-16!29;UBERON:0003528!8.93e-16!29;UBERON:0001893!8.93e-16!29;UBERON:0007811!4.79e-14!86;UBERON:0000153!1.82e-12!94;UBERON:0000956!1.41e-10!21;UBERON:0001869!1.41e-10!21;UBERON:0000203!1.41e-10!21;UBERON:0002619!4.72e-08!17;UBERON:0003076!5.29e-07!12;UBERON:0003057!5.29e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.11e-40,54;UBERON:0001017,3.73e-37,73;UBERON:0001049,1.16e-36,52;UBERON:0005068,1.16e-36,52;UBERON:0006241,1.16e-36,52;UBERON:0007135,1.16e-36,52;UBERON:0001016,7.30e-36,75;UBERON:0002020,1.21e-35,34;UBERON:0004121,1.54e-33,95;UBERON:0000924,1.54e-33,95;UBERON:0006601,1.54e-33,95;UBERON:0002346,2.41e-33,64;UBERON:0003075,2.41e-33,64;UBERON:0007284,2.41e-33,64;UBERON:0000955,1.53e-28,47;UBERON:0006238,1.53e-28,47;UBERON:0010371,6.15e-28,73;UBERON:0003528,3.37e-27,29;UBERON:0002791,3.37e-27,29;UBERON:0001893,3.37e-27,29;UBERON:0002616,3.52e-27,46;UBERON:0003080,2.43e-23,40;UBERON:0010314,1.22e-22,92;UBERON:0003056,1.50e-22,49;UBERON:0002780,4.72e-22,39;UBERON:0001890,4.72e-22,39;UBERON:0006240,4.72e-22,39;UBERON:0000956,5.61e-16,21;UBERON:0001869,5.61e-16,21;UBERON:0000203,5.61e-16,21;UBERON:0003076,5.94e-14,12;UBERON:0003057,5.94e-14,12;UBERON:0004111,2.02e-13,122;UBERON:0002420,5.72e-13,8;UBERON:0007245,5.72e-13,8;UBERON:0010009,5.72e-13,8;UBERON:0010011,5.72e-13,8;UBERON:0000454,5.72e-13,8;UBERON:0000025,2.64e-12,114;UBERON:0002240,1.52e-11,6;UBERON:0005174,1.52e-11,6;UBERON:0001137,1.52e-11,6;UBERON:0002619,9.56e-11,17;UBERON:0001948,6.71e-10,5;UBERON:0002315,6.71e-10,5;UBERON:0011216,6.70e-09,194;UBERON:0000369,1.05e-08,5;UBERON:0002435,1.05e-08,5;UBERON:0000204,1.05e-08,5;UBERON:0010082,1.05e-08,5;UBERON:0002950,3.26e-07,4;UBERON:0001891,3.26e-07,4;UBERON:0009616,3.26e-07,4;UBERON:0010286,3.26e-07,4;UBERON:0002257,9.78e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0.286533439938757,1.54701627683233,3.43937983461316,4.7609188134483,6.97214543856797,0,0,0,0,0,0,0,2.59224030771194,2.70011876663381,2.94454945891935,5.14171771926846,2.20868540951614,1.71487118900936,2.58782771749238,4.5960939330501,5.50579404996943,2.80912143787413,3.5329502648936,2.37395317914349,4.39140689291566,3.12548022334056,1.95428099300967,1.68828783009504,3.20876320331301,4.41942878210502,4.6982654663704,4.10078780815661,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0,0,0,1.75668478206928,1.8850203613211,0.255457055208591,0,0,0,2.09706895166752,1.37250180845588,1.63350657746724,1.56441888173049,1.27857728665165,1.66230435647648,0.811206315338788,0.101839363850316,0,0,2.31486041475121,0.130120442962704,0.229902104433473,0.720248519221397,1.05493372485001,0.272145996605311,0.2562274405697,0.655912071918102,1.29351685369508,0,0.378212160335639,0,0.219195732427575,0,0,0.61734640922383,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,1.26173969138476,1.3377599609307,0,0,0,0.464473343720877,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17756 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UXY3 | |||
|association_with_transcript=-25bp_to_ENSMUST00000156636_5end | |||
|cluster_id=chr1:66221810..66221821,+ | |||
|description=CAGE_peak_16_at_Mtap2_5end | |||
|id=chr1:66221810..66221821,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.60e-18!23;CL:0000337!5.60e-18!23;CL:0000540!2.29e-17!33;CL:0000047!2.29e-17!33;CL:0000031!2.29e-17!33;CL:0000404!2.29e-17!33;CL:0000393!6.32e-15!39;CL:0000211!6.32e-15!39;CL:0000221!6.87e-13!44;CL:0000133!6.87e-13!44;CL:0002319!8.48e-13!43;CL:0000055!7.61e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.71e-39,23;CL:0000337,4.71e-39,23;CL:0000540,4.38e-25,33;CL:0000047,4.38e-25,33;CL:0000031,4.38e-25,33;CL:0000404,4.38e-25,33;CL:0000393,4.95e-22,39;CL:0000211,4.95e-22,39;CL:0002319,1.18e-17,43;CL:0000221,4.24e-17,44;CL:0000133,4.24e-17,44;CL:0002609,1.21e-10,6;CL:0002321,2.95e-09,70;CL:0000120,8.27e-07,3;CL:0002612,9.78e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.27e-30!102;UBERON:0000924!1.27e-30!102;UBERON:0006601!1.27e-30!102;UBERON:0001017!1.82e-28!73;UBERON:0005743!1.82e-28!73;UBERON:0000073!2.74e-28!75;UBERON:0001016!2.74e-28!75;UBERON:0000033!6.86e-27!63;UBERON:0001049!8.25e-25!52;UBERON:0005068!8.25e-25!52;UBERON:0006241!8.25e-25!52;UBERON:0007135!8.25e-25!52;UBERON:0002346!3.82e-24!71;UBERON:0003075!3.82e-24!71;UBERON:0007284!3.82e-24!71;UBERON:0000955!4.03e-23!50;UBERON:0006238!4.03e-23!50;UBERON:0002616!2.02e-22!49;UBERON:0003056!1.38e-20!49;UBERON:0002020!1.24e-19!34;UBERON:0003080!2.18e-18!40;UBERON:0002780!9.88e-18!39;UBERON:0001890!9.88e-18!39;UBERON:0006240!9.88e-18!39;UBERON:0002791!8.93e-16!29;UBERON:0003528!8.93e-16!29;UBERON:0001893!8.93e-16!29;UBERON:0007811!4.79e-14!86;UBERON:0000153!1.82e-12!94;UBERON:0000956!1.41e-10!21;UBERON:0001869!1.41e-10!21;UBERON:0000203!1.41e-10!21;UBERON:0002619!4.72e-08!17;UBERON:0003076!5.29e-07!12;UBERON:0003057!5.29e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.11e-40,54;UBERON:0001017,3.73e-37,73;UBERON:0001049,1.16e-36,52;UBERON:0005068,1.16e-36,52;UBERON:0006241,1.16e-36,52;UBERON:0007135,1.16e-36,52;UBERON:0001016,7.30e-36,75;UBERON:0002020,1.21e-35,34;UBERON:0004121,1.54e-33,95;UBERON:0000924,1.54e-33,95;UBERON:0006601,1.54e-33,95;UBERON:0002346,2.41e-33,64;UBERON:0003075,2.41e-33,64;UBERON:0007284,2.41e-33,64;UBERON:0000955,1.53e-28,47;UBERON:0006238,1.53e-28,47;UBERON:0010371,6.15e-28,73;UBERON:0003528,3.37e-27,29;UBERON:0002791,3.37e-27,29;UBERON:0001893,3.37e-27,29;UBERON:0002616,3.52e-27,46;UBERON:0003080,2.43e-23,40;UBERON:0010314,1.22e-22,92;UBERON:0003056,1.50e-22,49;UBERON:0002780,4.72e-22,39;UBERON:0001890,4.72e-22,39;UBERON:0006240,4.72e-22,39;UBERON:0000956,5.61e-16,21;UBERON:0001869,5.61e-16,21;UBERON:0000203,5.61e-16,21;UBERON:0003076,5.94e-14,12;UBERON:0003057,5.94e-14,12;UBERON:0004111,2.02e-13,122;UBERON:0002420,5.72e-13,8;UBERON:0007245,5.72e-13,8;UBERON:0010009,5.72e-13,8;UBERON:0010011,5.72e-13,8;UBERON:0000454,5.72e-13,8;UBERON:0000025,2.64e-12,114;UBERON:0002240,1.52e-11,6;UBERON:0005174,1.52e-11,6;UBERON:0001137,1.52e-11,6;UBERON:0002619,9.56e-11,17;UBERON:0001948,6.71e-10,5;UBERON:0002315,6.71e-10,5;UBERON:0011216,6.70e-09,194;UBERON:0000369,1.05e-08,5;UBERON:0002435,1.05e-08,5;UBERON:0000204,1.05e-08,5;UBERON:0010082,1.05e-08,5;UBERON:0002950,3.26e-07,4;UBERON:0001891,3.26e-07,4;UBERON:0009616,3.26e-07,4;UBERON:0010286,3.26e-07,4;UBERON:0002257,9.78e-07,3 | |||
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|short_description=p16@Mtap2 | |||
}} |
Revision as of 21:31, 5 August 2015
Short description: | p16@Mtap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Mtap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -25bp_to_ENSMUST00000156636_5end |
EntrezGene: | 17756 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.71e-39 | 23 |
neuroblast (sensu Vertebrata) | 4.71e-39 | 23 |
neuron | 4.38e-25 | 33 |
neuronal stem cell | 4.38e-25 | 33 |
neuroblast | 4.38e-25 | 33 |
electrically signaling cell | 4.38e-25 | 33 |
electrically responsive cell | 4.95e-22 | 39 |
electrically active cell | 4.95e-22 | 39 |
neural cell | 1.18e-17 | 43 |
ectodermal cell | 4.24e-17 | 44 |
neurectodermal cell | 4.24e-17 | 44 |
neuron of cerebral cortex | 1.21e-10 | 6 |
embryonic cell | 2.95e-09 | 70 |
granule cell | 8.27e-07 | 3 |
neuron of the ventral spinal cord | 9.78e-07 | 3 |