FFCP PHASE1:Mm9::chr11:69414360..69414365,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69414360..69414365,-|id=chr11:69414360..69414365,-|ontology_enrichment_celltype=CL:0002453!3.32e-08!8|ontology_enrichment_celltype_v019_2=CL:0002453,2.54e-17,8;CL:0002319,4.77e-14,43;CL:0000333,1.17e-13,10;CL:0000095,1.17e-13,10;CL:0000243,1.17e-13,10;CL:0000123,1.17e-13,10;CL:0000125,1.17e-13,10;CL:0000030,1.17e-13,10;CL:0000339,1.17e-13,10;CL:0000221,1.20e-13,44;CL:0000133,1.20e-13,44;CL:0000128,5.81e-12,6;CL:0000126,5.81e-12,6;CL:0000127,5.81e-12,6;CL:0002610,8.71e-10,3;CL:0000117,9.37e-09,23;CL:0000337,9.37e-09,23;CL:0002321,2.66e-07,70;CL:0000878,3.86e-07,2;CL:0000129,3.86e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.13e-21!63;UBERON:0002346!1.28e-19!71;UBERON:0003075!1.28e-19!71;UBERON:0007284!1.28e-19!71;UBERON:0001049!2.16e-18!52;UBERON:0005068!2.16e-18!52;UBERON:0006241!2.16e-18!52;UBERON:0007135!2.16e-18!52;UBERON:0000955!4.03e-18!50;UBERON:0006238!4.03e-18!50;UBERON:0001017!5.99e-18!73;UBERON:0005743!5.99e-18!73;UBERON:0002616!1.41e-17!49;UBERON:0004121!4.29e-17!102;UBERON:0000924!4.29e-17!102;UBERON:0006601!4.29e-17!102;UBERON:0000073!5.80e-17!75;UBERON:0001016!5.80e-17!75;UBERON:0003056!1.60e-14!49;UBERON:0007811!1.68e-12!86;UBERON:0002020!1.22e-11!34;UBERON:0003080!7.58e-11!40;UBERON:0000153!1.27e-10!94;UBERON:0002780!3.89e-10!39;UBERON:0001890!3.89e-10!39;UBERON:0006240!3.89e-10!39;UBERON:0002791!2.06e-09!29;UBERON:0003528!2.06e-09!29;UBERON:0001893!2.06e-09!29;UBERON:0003076!3.06e-09!12;UBERON:0003057!3.06e-09!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.87e-30,73;UBERON:0001016,6.92e-29,75;UBERON:0000073,1.14e-27,54;UBERON:0001049,8.16e-24,52;UBERON:0005068,8.16e-24,52;UBERON:0006241,8.16e-24,52;UBERON:0007135,8.16e-24,52;UBERON:0004121,2.12e-23,95;UBERON:0000924,2.12e-23,95;UBERON:0006601,2.12e-23,95;UBERON:0003076,4.33e-22,12;UBERON:0003057,4.33e-22,12;UBERON:0002346,2.42e-20,64;UBERON:0003075,2.42e-20,64;UBERON:0007284,2.42e-20,64;UBERON:0010371,3.24e-17,73;UBERON:0002616,8.71e-16,46;UBERON:0000955,2.28e-15,47;UBERON:0006238,2.28e-15,47;UBERON:0002020,5.71e-13,34;UBERON:0010314,1.27e-12,92;UBERON:0002240,7.99e-12,6;UBERON:0005174,7.99e-12,6;UBERON:0001137,7.99e-12,6;UBERON:0004733,9.36e-12,6;UBERON:0004732,9.36e-12,6;UBERON:0002028,9.36e-12,6;UBERON:0007277,9.36e-12,6;UBERON:0004684,8.71e-10,3;UBERON:0002275,8.71e-10,3;UBERON:0001948,4.02e-09,5;UBERON:0002315,4.02e-09,5;UBERON:0003080,4.89e-09,40;UBERON:0002619,6.29e-09,17;UBERON:0000025,3.17e-08,114;UBERON:0003056,3.71e-08,49;UBERON:0002780,8.82e-08,39;UBERON:0001890,8.82e-08,39;UBERON:0006240,8.82e-08,39;UBERON:0003528,1.16e-07,29;UBERON:0002791,1.16e-07,29;UBERON:0001893,1.16e-07,29;UBERON:0011216,1.32e-07,194;UBERON:0004111,2.26e-07,122;UBERON:0002950,2.94e-07,4;UBERON:0001891,2.94e-07,4;UBERON:0009616,2.94e-07,4;UBERON:0010286,2.94e-07,4;UBERON:0002037,3.40e-07,4;UBERON:0002680,3.40e-07,4;UBERON:0001895,3.40e-07,4;UBERON:0010092,3.40e-07,4;UBERON:0006215,3.40e-07,4;UBERON:0000956,5.29e-07,21;UBERON:0001869,5.29e-07,21;UBERON:0000203,5.29e-07,21|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.872100625521786,2.85592037554813,1.55543919259427,1.39986421625363,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,8.06858441175265,0,0.270011876663381,0,2.85650984403804,1.76694832761291,0,0.0958454710182364,0,3.30347642998166,2.042997409363,2.91852413186863,0.395658863190582,0.365950574409639,0,2.79182999001381,2.25105044012672,0.916789486660861,1.47314292736834,1.85083185038834,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0,0.230615497256059,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,1.17112318804619,3.56059401582874,0,0.11981512450592,0,0,2.39665023047716,0.915001205637253,0.125654352112864,0.869121600961382,0.767146371990992,1.87009240103604,1.78465389374533,0.101839363850316,0.124406970610093,0,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0.2562274405697,0.187403449119458,1.81092359517311,0.215567992932842,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0,1.26173969138476,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,1.9266070798535,1.28932855251423,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0,3.33765543618917,0.341741761595705,0.206386867963223,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.844780627453891,0.469428954583016,0.911430693907651,0.524296722128554,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,1.84130094602871,1.14579102687879,2.06223818812425,0,0,0.675022500231806,0.900642406448441,0.453142408984205,1.55328093525546,0,0,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0.655490552289177,0.128050304809739,0.0574354689556133,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p@chr11:69414360..69414365,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:69414360..69414365,- | |||
|description=CAGE_peak_at_chr11:69414360..69414365,- | |||
|id=chr11:69414360..69414365,- | |||
|ontology_enrichment_celltype=CL:0002453!3.32e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.54e-17,8;CL:0002319,4.77e-14,43;CL:0000333,1.17e-13,10;CL:0000095,1.17e-13,10;CL:0000243,1.17e-13,10;CL:0000123,1.17e-13,10;CL:0000125,1.17e-13,10;CL:0000030,1.17e-13,10;CL:0000339,1.17e-13,10;CL:0000221,1.20e-13,44;CL:0000133,1.20e-13,44;CL:0000128,5.81e-12,6;CL:0000126,5.81e-12,6;CL:0000127,5.81e-12,6;CL:0002610,8.71e-10,3;CL:0000117,9.37e-09,23;CL:0000337,9.37e-09,23;CL:0002321,2.66e-07,70;CL:0000878,3.86e-07,2;CL:0000129,3.86e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.13e-21!63;UBERON:0002346!1.28e-19!71;UBERON:0003075!1.28e-19!71;UBERON:0007284!1.28e-19!71;UBERON:0001049!2.16e-18!52;UBERON:0005068!2.16e-18!52;UBERON:0006241!2.16e-18!52;UBERON:0007135!2.16e-18!52;UBERON:0000955!4.03e-18!50;UBERON:0006238!4.03e-18!50;UBERON:0001017!5.99e-18!73;UBERON:0005743!5.99e-18!73;UBERON:0002616!1.41e-17!49;UBERON:0004121!4.29e-17!102;UBERON:0000924!4.29e-17!102;UBERON:0006601!4.29e-17!102;UBERON:0000073!5.80e-17!75;UBERON:0001016!5.80e-17!75;UBERON:0003056!1.60e-14!49;UBERON:0007811!1.68e-12!86;UBERON:0002020!1.22e-11!34;UBERON:0003080!7.58e-11!40;UBERON:0000153!1.27e-10!94;UBERON:0002780!3.89e-10!39;UBERON:0001890!3.89e-10!39;UBERON:0006240!3.89e-10!39;UBERON:0002791!2.06e-09!29;UBERON:0003528!2.06e-09!29;UBERON:0001893!2.06e-09!29;UBERON:0003076!3.06e-09!12;UBERON:0003057!3.06e-09!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.87e-30,73;UBERON:0001016,6.92e-29,75;UBERON:0000073,1.14e-27,54;UBERON:0001049,8.16e-24,52;UBERON:0005068,8.16e-24,52;UBERON:0006241,8.16e-24,52;UBERON:0007135,8.16e-24,52;UBERON:0004121,2.12e-23,95;UBERON:0000924,2.12e-23,95;UBERON:0006601,2.12e-23,95;UBERON:0003076,4.33e-22,12;UBERON:0003057,4.33e-22,12;UBERON:0002346,2.42e-20,64;UBERON:0003075,2.42e-20,64;UBERON:0007284,2.42e-20,64;UBERON:0010371,3.24e-17,73;UBERON:0002616,8.71e-16,46;UBERON:0000955,2.28e-15,47;UBERON:0006238,2.28e-15,47;UBERON:0002020,5.71e-13,34;UBERON:0010314,1.27e-12,92;UBERON:0002240,7.99e-12,6;UBERON:0005174,7.99e-12,6;UBERON:0001137,7.99e-12,6;UBERON:0004733,9.36e-12,6;UBERON:0004732,9.36e-12,6;UBERON:0002028,9.36e-12,6;UBERON:0007277,9.36e-12,6;UBERON:0004684,8.71e-10,3;UBERON:0002275,8.71e-10,3;UBERON:0001948,4.02e-09,5;UBERON:0002315,4.02e-09,5;UBERON:0003080,4.89e-09,40;UBERON:0002619,6.29e-09,17;UBERON:0000025,3.17e-08,114;UBERON:0003056,3.71e-08,49;UBERON:0002780,8.82e-08,39;UBERON:0001890,8.82e-08,39;UBERON:0006240,8.82e-08,39;UBERON:0003528,1.16e-07,29;UBERON:0002791,1.16e-07,29;UBERON:0001893,1.16e-07,29;UBERON:0011216,1.32e-07,194;UBERON:0004111,2.26e-07,122;UBERON:0002950,2.94e-07,4;UBERON:0001891,2.94e-07,4;UBERON:0009616,2.94e-07,4;UBERON:0010286,2.94e-07,4;UBERON:0002037,3.40e-07,4;UBERON:0002680,3.40e-07,4;UBERON:0001895,3.40e-07,4;UBERON:0010092,3.40e-07,4;UBERON:0006215,3.40e-07,4;UBERON:0000956,5.29e-07,21;UBERON:0001869,5.29e-07,21;UBERON:0000203,5.29e-07,21 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.872100625521786,2.85592037554813,1.55543919259427,1.39986421625363,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,8.06858441175265,0,0.270011876663381,0,2.85650984403804,1.76694832761291,0,0.0958454710182364,0,3.30347642998166,2.042997409363,2.91852413186863,0.395658863190582,0.365950574409639,0,2.79182999001381,2.25105044012672,0.916789486660861,1.47314292736834,1.85083185038834,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0,0.230615497256059,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0.484875253135222,0,1.17112318804619,3.56059401582874,0,0.11981512450592,0,0,2.39665023047716,0.915001205637253,0.125654352112864,0.869121600961382,0.767146371990992,1.87009240103604,1.78465389374533,0.101839363850316,0.124406970610093,0,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0.2562274405697,0.187403449119458,1.81092359517311,0.215567992932842,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0,1.26173969138476,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,1.9266070798535,1.28932855251423,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0.119372344003136,0,0,3.33765543618917,0.341741761595705,0.206386867963223,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.844780627453891,0.469428954583016,0.911430693907651,0.524296722128554,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,1.84130094602871,1.14579102687879,2.06223818812425,0,0,0.675022500231806,0.900642406448441,0.453142408984205,1.55328093525546,0,0,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0,0,0,0.188626341386076,0.655490552289177,0.128050304809739,0.0574354689556133,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr11:69414360..69414365,- | |||
}} |
Latest revision as of 10:18, 6 August 2015
Short description: | p@chr11:69414360..69414365, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69414360..69414365, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.54e-17 | 8 |
neural cell | 4.77e-14 | 43 |
migratory neural crest cell | 1.17e-13 | 10 |
neuron associated cell | 1.17e-13 | 10 |
glial cell (sensu Vertebrata) | 1.17e-13 | 10 |
neuron associated cell (sensu Vertebrata) | 1.17e-13 | 10 |
glial cell | 1.17e-13 | 10 |
glioblast | 1.17e-13 | 10 |
glioblast (sensu Vertebrata) | 1.17e-13 | 10 |
ectodermal cell | 1.20e-13 | 44 |
neurectodermal cell | 1.20e-13 | 44 |
oligodendrocyte | 5.81e-12 | 6 |
macroglial cell | 5.81e-12 | 6 |
astrocyte | 5.81e-12 | 6 |
raphe nuclei neuron | 8.71e-10 | 3 |
CNS neuron (sensu Vertebrata) | 9.37e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.37e-09 | 23 |
embryonic cell | 2.66e-07 | 70 |
central nervous system macrophage | 3.86e-07 | 2 |
microglial cell | 3.86e-07 | 2 |