FFCP PHASE1:Mm9::chr7:38348671..38348675,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=107|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:38348671..38348675,-|id=chr7:38348671..38348675,-|ontology_enrichment_celltype=CL:0000107!1.30e-10!9;CL:0000540!5.41e-09!33;CL:0000047!5.41e-09!33;CL:0000031!5.41e-09!33;CL:0000404!5.41e-09!33;CL:0000221!1.72e-07!44;CL:0000133!1.72e-07!44;CL:0000393!2.01e-07!39;CL:0000211!2.01e-07!39;CL:0002319!6.34e-07!43|ontology_enrichment_celltype_v019_2=CL:0000107,3.71e-57,9;CL:0000540,2.09e-18,33;CL:0000047,2.09e-18,33;CL:0000031,2.09e-18,33;CL:0000404,2.09e-18,33;CL:0000393,2.06e-15,39;CL:0000211,2.06e-15,39;CL:0002319,7.04e-14,43;CL:0000221,1.54e-13,44;CL:0000133,1.54e-13,44;CL:0002321,4.42e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.17e-12!102;UBERON:0000924!1.17e-12!102;UBERON:0006601!1.17e-12!102;UBERON:0000010!3.55e-12!11;UBERON:0000073!6.07e-12!75;UBERON:0001016!6.07e-12!75;UBERON:0001017!9.32e-11!73;UBERON:0005743!9.32e-11!73;UBERON:0002410!1.30e-10!9;UBERON:0002346!3.14e-09!71;UBERON:0003075!3.14e-09!71;UBERON:0007284!3.14e-09!71;UBERON:0000033!7.55e-08!63;UBERON:0001894!2.57e-07!10;UBERON:0006222!2.57e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.71e-57,9;UBERON:0000010,1.21e-46,11;UBERON:0000011,2.98e-20,3;UBERON:0010313,3.45e-20,3;UBERON:0002342,3.45e-20,3;UBERON:0002005,3.45e-20,3;UBERON:0005428,3.45e-20,3;UBERON:0005062,3.45e-20,3;UBERON:0000013,9.63e-20,3;UBERON:0004121,6.10e-10,95;UBERON:0000924,6.10e-10,95;UBERON:0006601,6.10e-10,95;UBERON:0001017,1.06e-07,73;UBERON:0001016,1.84e-07,75|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0.220868540951614,0,0.287536413054709,0,0,0.127687338085188,0.46081959976873,0,0,0.52091337055676,0,0,0.61119299110724,0.294628585473668,0.284743361598206,0.186399445825301,0.681535739998656,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0.441683036920787,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0,0.457500602818626,0.125654352112864,0.173824320192276,0,0.41557608911912,0.486723789203273,0.101839363850316,0,0,0,0.520481771850815,0,0.360124259610698,1.65775299619287,0.748401490664606,1.40925092313335,1.21812241927647,0.258703370739016,0,0,0.175951124163949,0,0.556094498451196,0,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,0,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.678980343100753,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0.703270119553219,0,0,3.47059041357882,2.34263246577983,3.44677436372478,2.62865677747807,2.67358408898873,3.67999490025482,2.42886421004937,1.75353514746787,2.76701444562566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.428674070063185,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.418176592028937,0,0.539457385539283,0.0826534557253359,0,0,0,1.12738587736838,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0.483168241652012,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0.354951612318675,0,0,0,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p@chr7:38348671..38348675,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:38348671..38348675,- | |||
|id=chr7:38348671..38348675,- | |||
|ontology_enrichment_celltype=CL:0000107!1.30e-10!9;CL:0000540!5.41e-09!33;CL:0000047!5.41e-09!33;CL:0000031!5.41e-09!33;CL:0000404!5.41e-09!33;CL:0000221!1.72e-07!44;CL:0000133!1.72e-07!44;CL:0000393!2.01e-07!39;CL:0000211!2.01e-07!39;CL:0002319!6.34e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.71e-57,9;CL:0000540,2.09e-18,33;CL:0000047,2.09e-18,33;CL:0000031,2.09e-18,33;CL:0000404,2.09e-18,33;CL:0000393,2.06e-15,39;CL:0000211,2.06e-15,39;CL:0002319,7.04e-14,43;CL:0000221,1.54e-13,44;CL:0000133,1.54e-13,44;CL:0002321,4.42e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.17e-12!102;UBERON:0000924!1.17e-12!102;UBERON:0006601!1.17e-12!102;UBERON:0000010!3.55e-12!11;UBERON:0000073!6.07e-12!75;UBERON:0001016!6.07e-12!75;UBERON:0001017!9.32e-11!73;UBERON:0005743!9.32e-11!73;UBERON:0002410!1.30e-10!9;UBERON:0002346!3.14e-09!71;UBERON:0003075!3.14e-09!71;UBERON:0007284!3.14e-09!71;UBERON:0000033!7.55e-08!63;UBERON:0001894!2.57e-07!10;UBERON:0006222!2.57e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.71e-57,9;UBERON:0000010,1.21e-46,11;UBERON:0000011,2.98e-20,3;UBERON:0010313,3.45e-20,3;UBERON:0002342,3.45e-20,3;UBERON:0002005,3.45e-20,3;UBERON:0005428,3.45e-20,3;UBERON:0005062,3.45e-20,3;UBERON:0000013,9.63e-20,3;UBERON:0004121,6.10e-10,95;UBERON:0000924,6.10e-10,95;UBERON:0006601,6.10e-10,95;UBERON:0001017,1.06e-07,73;UBERON:0001016,1.84e-07,75 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0.220868540951614,0,0.287536413054709,0,0,0.127687338085188,0.46081959976873,0,0,0.52091337055676,0,0,0.61119299110724,0.294628585473668,0.284743361598206,0.186399445825301,0.681535739998656,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0.441683036920787,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0,0.457500602818626,0.125654352112864,0.173824320192276,0,0.41557608911912,0.486723789203273,0.101839363850316,0,0,0,0.520481771850815,0,0.360124259610698,1.65775299619287,0.748401490664606,1.40925092313335,1.21812241927647,0.258703370739016,0,0,0.175951124163949,0,0.556094498451196,0,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,0,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.678980343100753,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0.703270119553219,0,0,3.47059041357882,2.34263246577983,3.44677436372478,2.62865677747807,2.67358408898873,3.67999490025482,2.42886421004937,1.75353514746787,2.76701444562566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0.428674070063185,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.418176592028937,0,0.539457385539283,0.0826534557253359,0,0,0,1.12738587736838,0,0,0.194451188344048,0.129159823477731,0,0,0,0.104859344425711,0.483168241652012,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0.44449345560323,0.206035057238894,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.294397840268795,0,0.354951612318675,0,0,0,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr7:38348671..38348675,- | |||
}} |
Revision as of 13:25, 14 September 2013
Short description: | p@chr7:38348671..38348675, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:38348671..38348675, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.71e-57 | 9 |
neuron | 2.09e-18 | 33 |
neuronal stem cell | 2.09e-18 | 33 |
neuroblast | 2.09e-18 | 33 |
electrically signaling cell | 2.09e-18 | 33 |
electrically responsive cell | 2.06e-15 | 39 |
electrically active cell | 2.06e-15 | 39 |
neural cell | 7.04e-14 | 43 |
ectodermal cell | 1.54e-13 | 44 |
neurectodermal cell | 1.54e-13 | 44 |
embryonic cell | 4.42e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 3.71e-57 | 9 |
peripheral nervous system | 1.21e-46 | 11 |
parasympathetic nervous system | 2.98e-20 | 3 |
neural crest-derived structure | 3.45e-20 | 3 |
neural crest | 3.45e-20 | 3 |
enteric nervous system | 3.45e-20 | 3 |
vagal neural crest | 3.45e-20 | 3 |
neural fold | 3.45e-20 | 3 |
sympathetic nervous system | 9.63e-20 | 3 |
ectoderm-derived structure | 6.10e-10 | 95 |
ectoderm | 6.10e-10 | 95 |
presumptive ectoderm | 6.10e-10 | 95 |
central nervous system | 1.06e-07 | 73 |
nervous system | 1.84e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.