FFCP PHASE1:Mm9::chr6:58856538..58856573,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr6:58856538..58856573,+ | |id=chr6:58856538..58856573,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.61e-12!23;CL:0000337!2.61e-12!23;CL:0000540!1.11e-09!33;CL:0000047!1.11e-09!33;CL:0000031!1.11e-09!33;CL:0000404!1.11e-09!33;CL:0000393!6.86e-07!39;CL:0000211!6.86e-07!39;CL:0000221!6.94e-07!44;CL:0000133!6.94e-07!44 | |ontology_enrichment_celltype=CL:0000117!2.61e-12!23;CL:0000337!2.61e-12!23;CL:0000540!1.11e-09!33;CL:0000047!1.11e-09!33;CL:0000031!1.11e-09!33;CL:0000404!1.11e-09!33;CL:0000393!6.86e-07!39;CL:0000211!6.86e-07!39;CL:0000221!6.94e-07!44;CL:0000133!6.94e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.51e-14,23;CL:0000337,4.51e-14,23;CL:0000540,7.10e-09,33;CL:0000047,7.10e-09,33;CL:0000031,7.10e-09,33;CL:0000404,7.10e-09,33;CL:0002614,2.27e-08,3;CL:0002610,5.00e-08,3;CL:0002612,2.66e-07,3;CL:0000393,4.66e-07,39;CL:0000211,4.66e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.86e-27!71;UBERON:0003075!3.86e-27!71;UBERON:0007284!3.86e-27!71;UBERON:0004121!9.11e-25!102;UBERON:0000924!9.11e-25!102;UBERON:0006601!9.11e-25!102;UBERON:0000073!9.52e-25!75;UBERON:0001016!9.52e-25!75;UBERON:0001049!1.27e-24!52;UBERON:0005068!1.27e-24!52;UBERON:0006241!1.27e-24!52;UBERON:0007135!1.27e-24!52;UBERON:0001017!3.91e-24!73;UBERON:0005743!3.91e-24!73;UBERON:0000955!4.76e-23!50;UBERON:0006238!4.76e-23!50;UBERON:0000033!1.15e-22!63;UBERON:0002616!2.62e-22!49;UBERON:0003056!4.66e-18!49;UBERON:0003080!7.24e-18!40;UBERON:0002020!9.35e-18!34;UBERON:0002780!5.38e-17!39;UBERON:0001890!5.38e-17!39;UBERON:0006240!5.38e-17!39;UBERON:0002791!9.14e-14!29;UBERON:0003528!9.14e-14!29;UBERON:0001893!9.14e-14!29;UBERON:0007811!1.57e-11!86;UBERON:0000153!1.20e-09!94;UBERON:0002021!6.20e-09!10;UBERON:0000411!6.20e-09!10;UBERON:0001950!6.20e-09!10;UBERON:0000956!3.68e-08!21;UBERON:0001869!3.68e-08!21;UBERON:0000203!3.68e-08!21;UBERON:0002420!2.20e-07!8;UBERON:0007245!2.20e-07!8;UBERON:0010009!2.20e-07!8;UBERON:0010011!2.20e-07!8;UBERON:0000454!2.20e-07!8;UBERON:0003076!2.32e-07!12;UBERON:0003057!2.32e-07!12;UBERON:0002298!4.65e-07!6;UBERON:0002619!8.82e-07!17 | |ontology_enrichment_uberon=UBERON:0002346!3.86e-27!71;UBERON:0003075!3.86e-27!71;UBERON:0007284!3.86e-27!71;UBERON:0004121!9.11e-25!102;UBERON:0000924!9.11e-25!102;UBERON:0006601!9.11e-25!102;UBERON:0000073!9.52e-25!75;UBERON:0001016!9.52e-25!75;UBERON:0001049!1.27e-24!52;UBERON:0005068!1.27e-24!52;UBERON:0006241!1.27e-24!52;UBERON:0007135!1.27e-24!52;UBERON:0001017!3.91e-24!73;UBERON:0005743!3.91e-24!73;UBERON:0000955!4.76e-23!50;UBERON:0006238!4.76e-23!50;UBERON:0000033!1.15e-22!63;UBERON:0002616!2.62e-22!49;UBERON:0003056!4.66e-18!49;UBERON:0003080!7.24e-18!40;UBERON:0002020!9.35e-18!34;UBERON:0002780!5.38e-17!39;UBERON:0001890!5.38e-17!39;UBERON:0006240!5.38e-17!39;UBERON:0002791!9.14e-14!29;UBERON:0003528!9.14e-14!29;UBERON:0001893!9.14e-14!29;UBERON:0007811!1.57e-11!86;UBERON:0000153!1.20e-09!94;UBERON:0002021!6.20e-09!10;UBERON:0000411!6.20e-09!10;UBERON:0001950!6.20e-09!10;UBERON:0000956!3.68e-08!21;UBERON:0001869!3.68e-08!21;UBERON:0000203!3.68e-08!21;UBERON:0002420!2.20e-07!8;UBERON:0007245!2.20e-07!8;UBERON:0010009!2.20e-07!8;UBERON:0010011!2.20e-07!8;UBERON:0000454!2.20e-07!8;UBERON:0003076!2.32e-07!12;UBERON:0003057!2.32e-07!12;UBERON:0002298!4.65e-07!6;UBERON:0002619!8.82e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.20e-48,54;UBERON:0001049,5.30e-44,52;UBERON:0005068,5.30e-44,52;UBERON:0006241,5.30e-44,52;UBERON:0007135,5.30e-44,52;UBERON:0001017,4.55e-38,73;UBERON:0001016,7.86e-37,75;UBERON:0000955,1.71e-34,47;UBERON:0006238,1.71e-34,47;UBERON:0002346,2.93e-34,64;UBERON:0003075,2.93e-34,64;UBERON:0007284,2.93e-34,64;UBERON:0002020,1.50e-33,34;UBERON:0002616,6.62e-33,46;UBERON:0010371,4.74e-29,73;UBERON:0003080,1.93e-27,40;UBERON:0004121,2.60e-27,95;UBERON:0000924,2.60e-27,95;UBERON:0006601,2.60e-27,95;UBERON:0002780,1.34e-25,39;UBERON:0001890,1.34e-25,39;UBERON:0006240,1.34e-25,39;UBERON:0003528,1.97e-24,29;UBERON:0002791,1.97e-24,29;UBERON:0001893,1.97e-24,29;UBERON:0010314,7.90e-23,92;UBERON:0003056,2.91e-21,49;UBERON:0002021,2.64e-19,10;UBERON:0000411,2.64e-19,10;UBERON:0001950,2.64e-19,10;UBERON:0003076,4.07e-17,12;UBERON:0003057,4.07e-17,12;UBERON:0000025,1.02e-15,114;UBERON:0002619,5.15e-15,17;UBERON:0004111,3.69e-14,122;UBERON:0000956,6.49e-14,21;UBERON:0001869,6.49e-14,21;UBERON:0000203,6.49e-14,21;UBERON:0002240,5.31e-13,6;UBERON:0005174,5.31e-13,6;UBERON:0001137,5.31e-13,6;UBERON:0002420,1.73e-12,8;UBERON:0007245,1.73e-12,8;UBERON:0010009,1.73e-12,8;UBERON:0010011,1.73e-12,8;UBERON:0000454,1.73e-12,8;UBERON:0001948,4.29e-11,5;UBERON:0002315,4.29e-11,5;UBERON:0002950,1.63e-10,4;UBERON:0001891,1.63e-10,4;UBERON:0009616,1.63e-10,4;UBERON:0010286,1.63e-10,4;UBERON:0011216,5.30e-09,194;UBERON:0002038,2.27e-08,3;UBERON:0009663,2.27e-08,3;UBERON:0009661,2.27e-08,3;UBERON:0000125,2.27e-08,3;UBERON:0002308,2.27e-08,3;UBERON:0004684,5.00e-08,3;UBERON:0002275,5.00e-08,3;UBERON:0000483,1.54e-07,174;UBERON:0000119,2.31e-07,176;UBERON:0002257,2.66e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,0,0,0.414758449233911,0.135005938331691,0.210324961351382,5.99867067247988,7.95126747425809,0.244981598429908,0,0,18.7196997698961,13.6625451751151,14.4390141260869,1.05509030184155,0.731901148819277,2.6045668527838,20.1011759280994,47.8348218526928,34.0740092542287,10.3120004915784,9.39653093274079,4.47358669980721,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.346970653532272,0.304465478312141,0.461230994512117,1.05505848386836,0.823120949949934,0.125666591329675,0,0,0,0,0,0,0,3.80615036115011,9.42510180660548,0,0,0,0,15.5782264981016,1.37250180845588,3.26701315493447,6.60532416730651,12.5300574091862,9.97382613885888,16.8730913590468,0.203678727700633,0,0,0.210441855886474,0,0,0,0.150704817835715,0.272145996605311,0.512454881139399,0.937017245597288,0.776110112217047,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.292399974850665,0,0,2.94405927989778,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0.198956472041151,0.58489226135736,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,12.6834966090356,22.3874321391108,0,0,0,0,0.215423397732799,0,0,0.566153061577665,0,0,0.790575555893047,2.89189184779626,0.567760340833074,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,2.38307724027652,0,0,0.214337035031592,0.709360934569094,1.07021290561242,0.493647061806363,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,6.86073617438886,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,3.95326289831947,3.22227665555024,2.29158205375759,13.5764014051513,4.7955776383945,5.2877572817279,4.72515750162264,4.5032120322422,5.89085131679466,4.14208249401456,0.207574695168353,0,0.512200817262403,0,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,0,0.565879024158229,0.0936415074698824,0.0640251524048693,0.402048282689293,0,0.463537303779422,0,0.412085900803307,0.147198920134397,0,0,1.1921809497366,0.872078499793971,0.658765662907314,0.507687647350059,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.492522411877817,0,0.309873682371932,0.192906610981141,0.999242311751784,0.467863216890817,0.429742108096597,0.765153328275374,0,0.463735671240843 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,0,0,0.414758449233911,0.135005938331691,0.210324961351382,5.99867067247988,7.95126747425809,0.244981598429908,0,0,18.7196997698961,13.6625451751151,14.4390141260869,1.05509030184155,0.731901148819277,2.6045668527838,20.1011759280994,47.8348218526928,34.0740092542287,10.3120004915784,9.39653093274079,4.47358669980721,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.346970653532272,0.304465478312141,0.461230994512117,1.05505848386836,0.823120949949934,0.125666591329675,0,0,0,0,0,0,0,3.80615036115011,9.42510180660548,0,0,0,0,15.5782264981016,1.37250180845588,3.26701315493447,6.60532416730651,12.5300574091862,9.97382613885888,16.8730913590468,0.203678727700633,0,0,0.210441855886474,0,0,0,0.150704817835715,0.272145996605311,0.512454881139399,0.937017245597288,0.776110112217047,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.292399974850665,0,0,2.94405927989778,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0.198956472041151,0.58489226135736,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,12.6834966090356,22.3874321391108,0,0,0,0,0.215423397732799,0,0,0.566153061577665,0,0,0.790575555893047,2.89189184779626,0.567760340833074,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,2.38307724027652,0,0,0.214337035031592,0.709360934569094,1.07021290561242,0.493647061806363,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,6.86073617438886,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,3.95326289831947,3.22227665555024,2.29158205375759,13.5764014051513,4.7955776383945,5.2877572817279,4.72515750162264,4.5032120322422,5.89085131679466,4.14208249401456,0.207574695168353,0,0.512200817262403,0,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,0,0.565879024158229,0.0936415074698824,0.0640251524048693,0.402048282689293,0,0.463537303779422,0,0.412085900803307,0.147198920134397,0,0,1.1921809497366,0.872078499793971,0.658765662907314,0.507687647350059,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.492522411877817,0,0.309873682371932,0.192906610981141,0.999242311751784,0.467863216890817,0.429742108096597,0.765153328275374,0,0.463735671240843 | ||
|short_description=p@chr6:58856538..58856573,+ | |short_description=p@chr6:58856538..58856573,+ | ||
}} | }} |
Revision as of 11:27, 13 November 2012
Short description: | p@chr6:58856538..58856573, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:58856538..58856573, + |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.51e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.51e-14 | 23 |
neuron | 7.10e-09 | 33 |
neuronal stem cell | 7.10e-09 | 33 |
neuroblast | 7.10e-09 | 33 |
electrically signaling cell | 7.10e-09 | 33 |
neuron of the substantia nigra | 2.27e-08 | 3 |
raphe nuclei neuron | 5.00e-08 | 3 |
neuron of the ventral spinal cord | 2.66e-07 | 3 |
electrically responsive cell | 4.66e-07 | 39 |
electrically active cell | 4.66e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.