FFCP PHASE1:Hg19::chr18:44336956..44336974,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29906|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17827|TSSclassifier=S|UniProt=B3KSU2,O15466|association_with_transcript=64bp_to_NM_013305,uc002lcj.1,uc010dno.1,uc010xcy.1,uc010xcz.1_5end|coexpression_cluster_id=C10|description=CAGE_peak_4_at_ST8SIA5_5end|id=chr18:44336956..44336974,-|ontology_enrichment_celltype=CL:0000047!1.21e-13!8;CL:0000540!2.29e-09!6;CL:0000031!2.29e-09!6;CL:0000404!2.29e-09!6;CL:0002319!9.82e-08!25;CL:0002603!9.50e-07!3|ontology_enrichment_celltype_v019=CL:0000047;4.69e-13;2!CL:0000540;3.76e-09;6!CL:0000404;3.76e-09;6!CL:0002319;3.47e-07;25|ontology_enrichment_celltype_v019_2=CL:0000047,2.99e-18,8;CL:0000540,2.88e-09,6;CL:0000031,2.88e-09,6;CL:0000404,2.88e-09,6;CL:0002319,3.43e-07,25|ontology_enrichment_development_v019=UBERON:0006215;1.75e-18;3!CL:0000031;3.76e-09;6!UBERON:0006601;1.70e-07;82!UBERON:0000358;3.20e-07;1!UBERON:0005425;6.68e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.60e-59!82;UBERON:0000073!1.53e-56!94;UBERON:0001016!1.53e-56!94;UBERON:0005743!4.12e-56!86;UBERON:0001049!2.72e-54!57;UBERON:0005068!2.72e-54!57;UBERON:0006241!2.72e-54!57;UBERON:0007135!2.72e-54!57;UBERON:0002616!3.60e-44!59;UBERON:0000955!1.30e-42!69;UBERON:0006238!1.30e-42!69;UBERON:0003075!1.04e-39!86;UBERON:0007284!1.04e-39!86;UBERON:0002346!2.30e-39!90;UBERON:0000924!5.45e-33!173;UBERON:0006601!5.45e-33!173;UBERON:0004121!9.77e-33!169;UBERON:0002780!2.16e-32!41;UBERON:0001890!2.16e-32!41;UBERON:0006240!2.16e-32!41;UBERON:0001893!7.42e-32!34;UBERON:0002020!1.04e-31!34;UBERON:0003528!1.04e-31!34;UBERON:0003080!1.91e-31!42;UBERON:0007023!4.99e-31!115;UBERON:0002791!6.59e-30!33;UBERON:0002619!2.04e-29!22;UBERON:0001950!2.83e-29!20;UBERON:0001869!6.65e-29!32;UBERON:0000956!2.21e-25!25;UBERON:0000203!2.21e-25!25;UBERON:0003076!2.58e-25!15;UBERON:0003057!2.58e-25!15;UBERON:0000033!5.56e-24!123;UBERON:0000153!1.37e-23!129;UBERON:0007811!1.37e-23!129;UBERON:0004732!3.46e-22!13;UBERON:0003056!5.51e-21!61;UBERON:0004733!3.63e-20!12;UBERON:0002028!3.63e-20!12;UBERON:0007277!3.63e-20!12;UBERON:0002680!9.86e-19!9;UBERON:0001895!9.86e-19!9;UBERON:0010092!9.86e-19!9;UBERON:0002037!2.42e-13!6;UBERON:0006215!2.42e-13!6;UBERON:0000025!4.28e-13!194;UBERON:0002021!3.33e-12!5;UBERON:0001871!1.95e-10!7;UBERON:0000200!4.45e-10!6;UBERON:0000064!1.51e-09!219;UBERON:0004111!2.03e-09!241;UBERON:0002298!5.61e-09!8;UBERON:0000483!1.34e-08!309;UBERON:0000475!1.44e-08!365;UBERON:0000119!2.18e-08!312;UBERON:0001872!5.72e-08!5;UBERON:0002308!8.25e-08!9;UBERON:0000125!8.25e-08!9;UBERON:0002771!8.97e-08!3;UBERON:0000477!4.40e-07!286;UBERON:0000988!4.55e-07!3;UBERON:0000922!6.32e-07!612;UBERON:0002240!8.56e-07!3|ontology_enrichment_uberon_v019=UBERON:0001950;4.38e-58;20!UBERON:0002619;9.14e-53;22!UBERON:0000956;2.55e-46;25!UBERON:0000203;2.55e-46;25!UBERON:0001869;6.82e-40;32!UBERON:0001893;9.08e-38;34!UBERON:0002791;1.64e-35;32!UBERON:0003528;4.68e-33;34!UBERON:0002020;4.68e-33;34!UBERON:0002021;1.60e-28;5!UBERON:0002780;4.94e-25;41!UBERON:0001890;4.94e-25;41!UBERON:0000073;2.08e-24;53!UBERON:0002616;2.08e-24;53!UBERON:0001016;1.92e-20;83!UBERON:0001871;2.28e-20;6!UBERON:0001017;2.94e-17;75!UBERON:0000955;9.12e-17;68!UBERON:0000200;1.36e-15;6!UBERON:0002771;3.83e-12;2!UBERON:0001872;5.45e-11;5!UBERON:0004732;5.55e-11;13!UBERON:0002680;1.32e-10;9!UBERON:0001895;1.32e-10;9!UBERON:0002037;1.72e-09;6!UBERON:0004733;5.64e-08;12!UBERON:0002028;5.64e-08;12!UBERON:0007023;2.25e-07;114!UBERON:0007190;2.30e-07;1!UBERON:0002581;3.20e-07;1!UBERON:0002902;3.20e-07;1!UBERON:0002022;3.20e-07;1!UBERON:0009899;3.20e-07;1!UBERON:0011216;3.77e-07;132!UBERON:0001882;6.68e-07;1!UBERON:0000941;6.68e-07;1!UBERON:0001785;6.68e-07;1!UBERON:0002464;6.68e-07;1!UBERON:0004904;6.68e-07;1!UBERON:0001021;6.68e-07;1!UBERON:0005403;6.68e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.16e-58,20;UBERON:0002619,8.72e-53,22;UBERON:0001016,1.04e-50,89;UBERON:0001017,7.12e-49,81;UBERON:0001869,1.53e-46,32;UBERON:0000956,2.45e-46,25;UBERON:0000203,2.45e-46,25;UBERON:0001893,1.12e-43,34;UBERON:0000073,2.07e-42,53;UBERON:0002616,2.07e-42,53;UBERON:0002791,6.18e-41,32;UBERON:0001049,6.07e-40,56;UBERON:0005068,6.07e-40,56;UBERON:0006241,6.07e-40,56;UBERON:0007135,6.07e-40,56;UBERON:0000955,1.74e-38,68;UBERON:0006238,1.74e-38,68;UBERON:0003528,2.10e-38,34;UBERON:0002020,2.10e-38,34;UBERON:0002780,8.52e-36,41;UBERON:0001890,8.52e-36,41;UBERON:0003080,8.52e-36,41;UBERON:0006240,8.52e-36,41;UBERON:0003075,9.04e-29,82;UBERON:0007284,9.04e-29,82;UBERON:0002021,2.48e-28,5;UBERON:0002346,3.11e-27,86;UBERON:0003056,4.95e-26,61;UBERON:0004121,5.44e-26,171;UBERON:0000924,5.44e-26,171;UBERON:0006601,5.44e-26,171;UBERON:0010371,5.74e-24,104;UBERON:0001871,2.39e-20,6;UBERON:0011216,1.18e-18,223;UBERON:0010314,3.34e-16,132;UBERON:0000200,1.11e-15,6;UBERON:0007023,1.14e-15,114;UBERON:0002771,3.05e-12,2;UBERON:0001872,4.52e-11,5;UBERON:0004732,6.45e-11,13;UBERON:0002680,1.56e-10,9;UBERON:0001895,1.56e-10,9;UBERON:0010092,1.56e-10,9;UBERON:0002037,1.67e-09,6;UBERON:0006215,1.67e-09,6;UBERON:0000025,1.13e-08,192;UBERON:0004733,6.36e-08,12;UBERON:0002028,6.36e-08,12;UBERON:0007277,6.36e-08,12;UBERON:0007190,2.37e-07,1;UBERON:0002902,2.67e-07,1;UBERON:0009899,2.67e-07,1;UBERON:0002581,2.84e-07,1;UBERON:0002022,3.82e-07,1;UBERON:0001882,5.14e-07,1;UBERON:0005403,5.14e-07,1;UBERON:0000941,6.88e-07,1;UBERON:0001785,6.88e-07,1;UBERON:0002464,6.88e-07,1;UBERON:0004904,6.88e-07,1;UBERON:0001021,6.88e-07,1;UBERON:0003902,6.88e-07,1;UBERON:0005425,6.88e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.612002073732759,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,3.30323011489202,3.90419561572865,1.54657762555539,1.84267891867784,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26602474769461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.29875337426592,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0,1.52581736317083,6.3030178160798,5.6154047601174,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,5.81538247097931,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,1.96263467463224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0.858452096273142,0.446342914883745,0.873385142327441,0,0,0,0,0,0,0,0,0.408610218334727,0,0.137539436597234,0.415440338029185,0,0,2.06548492637284,0,0.788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.517131825446202,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46431517882356,0.876336514945499,0,0.665574309221114,0.310482014706917,0,0,0,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0,10.694084046201,0,0,0,0.495743057036009,0,0,0.315446980005013,0,0,0,1.66995985250795,1.41696576325585,1.27707087245721,1.23069818544453,4.53729053199093,2.76629009856872,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57949198477492,0,0.620060389503552,1.71222687523548,2.18789923607288,0,0,0,0,0,0,0,0,0,0,0,1.01954599465248,2.63091094251396,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,2.33939463462106,0,0,0,0.329821550236287,0.150962843566674,0,0,0,0,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,2.3117106664911,8.72701380680755,0,0,0,0,0,0,0,0.713921808193872,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0.476128862927481,0,0,0,0,0,0,0.684466602170562,0.0673520530145875,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0|short_description=p4@ST8SIA5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=29906 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17827 | |||
|TSSclassifier=S | |||
|UniProt=B3KSU2,O15466 | |||
|association_with_transcript=64bp_to_NM_013305,uc002lcj.1,uc010dno.1,uc010xcy.1,uc010xcz.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_ST8SIA5_5end | |||
|id=chr18:44336956..44336974,- | |||
|ontology_enrichment_celltype=CL:0000047!1.21e-13!8;CL:0000540!2.29e-09!6;CL:0000031!2.29e-09!6;CL:0000404!2.29e-09!6;CL:0002319!9.82e-08!25;CL:0002603!9.50e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.69e-13;2!CL:0000540;3.76e-09;6!CL:0000404;3.76e-09;6!CL:0002319;3.47e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.99e-18,8;CL:0000540,2.88e-09,6;CL:0000031,2.88e-09,6;CL:0000404,2.88e-09,6;CL:0002319,3.43e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.75e-18;3!CL:0000031;3.76e-09;6!UBERON:0006601;1.70e-07;82!UBERON:0000358;3.20e-07;1!UBERON:0005425;6.68e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.60e-59!82;UBERON:0000073!1.53e-56!94;UBERON:0001016!1.53e-56!94;UBERON:0005743!4.12e-56!86;UBERON:0001049!2.72e-54!57;UBERON:0005068!2.72e-54!57;UBERON:0006241!2.72e-54!57;UBERON:0007135!2.72e-54!57;UBERON:0002616!3.60e-44!59;UBERON:0000955!1.30e-42!69;UBERON:0006238!1.30e-42!69;UBERON:0003075!1.04e-39!86;UBERON:0007284!1.04e-39!86;UBERON:0002346!2.30e-39!90;UBERON:0000924!5.45e-33!173;UBERON:0006601!5.45e-33!173;UBERON:0004121!9.77e-33!169;UBERON:0002780!2.16e-32!41;UBERON:0001890!2.16e-32!41;UBERON:0006240!2.16e-32!41;UBERON:0001893!7.42e-32!34;UBERON:0002020!1.04e-31!34;UBERON:0003528!1.04e-31!34;UBERON:0003080!1.91e-31!42;UBERON:0007023!4.99e-31!115;UBERON:0002791!6.59e-30!33;UBERON:0002619!2.04e-29!22;UBERON:0001950!2.83e-29!20;UBERON:0001869!6.65e-29!32;UBERON:0000956!2.21e-25!25;UBERON:0000203!2.21e-25!25;UBERON:0003076!2.58e-25!15;UBERON:0003057!2.58e-25!15;UBERON:0000033!5.56e-24!123;UBERON:0000153!1.37e-23!129;UBERON:0007811!1.37e-23!129;UBERON:0004732!3.46e-22!13;UBERON:0003056!5.51e-21!61;UBERON:0004733!3.63e-20!12;UBERON:0002028!3.63e-20!12;UBERON:0007277!3.63e-20!12;UBERON:0002680!9.86e-19!9;UBERON:0001895!9.86e-19!9;UBERON:0010092!9.86e-19!9;UBERON:0002037!2.42e-13!6;UBERON:0006215!2.42e-13!6;UBERON:0000025!4.28e-13!194;UBERON:0002021!3.33e-12!5;UBERON:0001871!1.95e-10!7;UBERON:0000200!4.45e-10!6;UBERON:0000064!1.51e-09!219;UBERON:0004111!2.03e-09!241;UBERON:0002298!5.61e-09!8;UBERON:0000483!1.34e-08!309;UBERON:0000475!1.44e-08!365;UBERON:0000119!2.18e-08!312;UBERON:0001872!5.72e-08!5;UBERON:0002308!8.25e-08!9;UBERON:0000125!8.25e-08!9;UBERON:0002771!8.97e-08!3;UBERON:0000477!4.40e-07!286;UBERON:0000988!4.55e-07!3;UBERON:0000922!6.32e-07!612;UBERON:0002240!8.56e-07!3 | |||
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|short_description=p4@ST8SIA5 | |||
}} |
Revision as of 17:35, 11 September 2013
Short description: | p4@ST8SIA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ST8SIA5_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 64bp_to_NM_013305, uc002lcj.1, uc010dno.1, uc010xcy.1, uc010xcz.1_5end |
EntrezGene: | ST8SIA5 |
HGNC: | 17827 |
UniProt: | B3KSU2O15466 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.99e-18 | 8 |
neuron | 2.88e-09 | 6 |
neuroblast | 2.88e-09 | 6 |
electrically signaling cell | 2.88e-09 | 6 |
neural cell | 3.43e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.