FFCP PHASE1:Mm9::chr11:104168001..104168012,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=13|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:104168001..104168012,+|id=chr11:104168001..104168012,+|ontology_enrichment_celltype=CL:0000117!2.46e-23!23;CL:0000337!2.46e-23!23;CL:0000540!1.04e-16!33;CL:0000047!1.04e-16!33;CL:0000031!1.04e-16!33;CL:0000404!1.04e-16!33;CL:0000393!7.49e-13!39;CL:0000211!7.49e-13!39;CL:0002319!8.73e-12!43;CL:0000221!2.48e-11!44;CL:0000133!2.48e-11!44;CL:0000055!5.11e-09!50;CL:0002609!2.59e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,2.75e-47,23;CL:0000337,2.75e-47,23;CL:0000540,1.55e-31,33;CL:0000047,1.55e-31,33;CL:0000031,1.55e-31,33;CL:0000404,1.55e-31,33;CL:0000393,5.85e-26,39;CL:0000211,5.85e-26,39;CL:0002319,4.17e-23,43;CL:0000221,1.79e-22,44;CL:0000133,1.79e-22,44;CL:0002609,1.86e-14,6;CL:0002321,2.19e-12,70;CL:0000120,1.73e-09,3;CL:0002613,1.73e-09,3;CL:0002612,3.25e-09,3;CL:0000723,1.83e-08,91;CL:0000048,1.83e-08,91;CL:0002608,4.38e-08,3;CL:0002610,4.64e-08,3;CL:0000034,1.16e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.60e-28!34;UBERON:0001049!3.99e-25!52;UBERON:0005068!3.99e-25!52;UBERON:0006241!3.99e-25!52;UBERON:0007135!3.99e-25!52;UBERON:0001017!1.20e-24!73;UBERON:0005743!1.20e-24!73;UBERON:0000073!1.27e-24!75;UBERON:0001016!1.27e-24!75;UBERON:0002346!2.52e-23!71;UBERON:0003075!2.52e-23!71;UBERON:0007284!2.52e-23!71;UBERON:0002791!2.73e-22!29;UBERON:0003528!2.73e-22!29;UBERON:0001893!2.73e-22!29;UBERON:0002616!6.43e-22!49;UBERON:0000955!3.09e-21!50;UBERON:0006238!3.09e-21!50;UBERON:0004121!5.24e-20!102;UBERON:0000924!5.24e-20!102;UBERON:0006601!5.24e-20!102;UBERON:0003080!3.21e-19!40;UBERON:0002780!2.09e-18!39;UBERON:0001890!2.09e-18!39;UBERON:0006240!2.09e-18!39;UBERON:0000033!2.53e-18!63;UBERON:0003056!3.92e-18!49;UBERON:0000956!3.49e-16!21;UBERON:0001869!3.49e-16!21;UBERON:0000203!3.49e-16!21;UBERON:0002619!1.84e-12!17;UBERON:0007811!3.67e-10!86;UBERON:0002021!3.71e-10!10;UBERON:0000411!3.71e-10!10;UBERON:0001950!3.71e-10!10;UBERON:0000153!2.42e-08!94;UBERON:0002240!9.56e-08!6;UBERON:0005174!9.56e-08!6;UBERON:0001137!9.56e-08!6;UBERON:0000025!1.12e-07!114;UBERON:0002420!3.08e-07!8;UBERON:0007245!3.08e-07!8;UBERON:0010009!3.08e-07!8;UBERON:0010011!3.08e-07!8;UBERON:0000454!3.08e-07!8;UBERON:0001948!4.77e-07!5;UBERON:0002315!4.77e-07!5;UBERON:0000369!7.00e-07!5;UBERON:0002435!7.00e-07!5;UBERON:0000204!7.00e-07!5;UBERON:0010082!7.00e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.08e-49,34;UBERON:0003528,1.78e-36,29;UBERON:0002791,1.78e-36,29;UBERON:0001893,1.78e-36,29;UBERON:0000073,2.46e-36,54;UBERON:0001017,2.40e-32,73;UBERON:0001016,2.54e-31,75;UBERON:0001049,5.61e-30,52;UBERON:0005068,5.61e-30,52;UBERON:0006241,5.61e-30,52;UBERON:0007135,5.61e-30,52;UBERON:0000956,4.67e-29,21;UBERON:0001869,4.67e-29,21;UBERON:0000203,4.67e-29,21;UBERON:0002780,6.44e-26,39;UBERON:0001890,6.44e-26,39;UBERON:0006240,6.44e-26,39;UBERON:0003080,3.76e-25,40;UBERON:0002619,2.70e-24,17;UBERON:0004121,1.95e-23,95;UBERON:0000924,1.95e-23,95;UBERON:0006601,1.95e-23,95;UBERON:0002346,2.59e-23,64;UBERON:0003075,2.59e-23,64;UBERON:0007284,2.59e-23,64;UBERON:0002021,1.71e-21,10;UBERON:0000411,1.71e-21,10;UBERON:0001950,1.71e-21,10;UBERON:0002616,2.95e-21,46;UBERON:0000955,1.05e-20,47;UBERON:0006238,1.05e-20,47;UBERON:0010371,9.47e-20,73;UBERON:0003056,1.15e-19,49;UBERON:0010314,1.63e-14,92;UBERON:0001948,7.25e-14,5;UBERON:0002315,7.25e-14,5;UBERON:0000025,9.64e-12,114;UBERON:0002240,1.68e-11,6;UBERON:0005174,1.68e-11,6;UBERON:0001137,1.68e-11,6;UBERON:0004111,1.36e-10,122;UBERON:0000369,2.76e-09,5;UBERON:0002435,2.76e-09,5;UBERON:0000204,2.76e-09,5;UBERON:0010082,2.76e-09,5;UBERON:0002257,3.25e-09,3;UBERON:0011216,4.12e-09,194;UBERON:0002420,1.67e-08,8;UBERON:0007245,1.67e-08,8;UBERON:0010009,1.67e-08,8;UBERON:0010011,1.67e-08,8;UBERON:0000454,1.67e-08,8;UBERON:0004684,4.64e-08,3;UBERON:0002275,4.64e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,3.1739458756322,3.80298842103708,0,0,0,0,0,0,0,1.14058573539325,2.43010688997043,1.05162480675691,1.99955689082663,2.42955395046775,1.10241719293459,1.34183659425531,1.83843757322004,1.10115880999389,1.14918604276669,2.4577045320999,2.76961204233407,6.22115976496386,3.64639359389732,1.3959149950069,0,0.30559649555362,6.48182888042069,3.13217697758026,1.67759501242771,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0,0.150722640552623,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.449371918214468,0.915001205637253,1.25654352112864,0.521472960576829,0,0.83115217823824,0,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,5.52390283808612,2.86447756719698,1.20297227640581,1.37016503954128,4.5323633843382,0,3.15224842256954,2.71885445390523,3.10656187051092,0,1.19707462020309,0,0,0.419226325255965,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr11:104168001..104168012,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:104168001..104168012,+ | |||
|id=chr11:104168001..104168012,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.46e-23!23;CL:0000337!2.46e-23!23;CL:0000540!1.04e-16!33;CL:0000047!1.04e-16!33;CL:0000031!1.04e-16!33;CL:0000404!1.04e-16!33;CL:0000393!7.49e-13!39;CL:0000211!7.49e-13!39;CL:0002319!8.73e-12!43;CL:0000221!2.48e-11!44;CL:0000133!2.48e-11!44;CL:0000055!5.11e-09!50;CL:0002609!2.59e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.75e-47,23;CL:0000337,2.75e-47,23;CL:0000540,1.55e-31,33;CL:0000047,1.55e-31,33;CL:0000031,1.55e-31,33;CL:0000404,1.55e-31,33;CL:0000393,5.85e-26,39;CL:0000211,5.85e-26,39;CL:0002319,4.17e-23,43;CL:0000221,1.79e-22,44;CL:0000133,1.79e-22,44;CL:0002609,1.86e-14,6;CL:0002321,2.19e-12,70;CL:0000120,1.73e-09,3;CL:0002613,1.73e-09,3;CL:0002612,3.25e-09,3;CL:0000723,1.83e-08,91;CL:0000048,1.83e-08,91;CL:0002608,4.38e-08,3;CL:0002610,4.64e-08,3;CL:0000034,1.16e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.60e-28!34;UBERON:0001049!3.99e-25!52;UBERON:0005068!3.99e-25!52;UBERON:0006241!3.99e-25!52;UBERON:0007135!3.99e-25!52;UBERON:0001017!1.20e-24!73;UBERON:0005743!1.20e-24!73;UBERON:0000073!1.27e-24!75;UBERON:0001016!1.27e-24!75;UBERON:0002346!2.52e-23!71;UBERON:0003075!2.52e-23!71;UBERON:0007284!2.52e-23!71;UBERON:0002791!2.73e-22!29;UBERON:0003528!2.73e-22!29;UBERON:0001893!2.73e-22!29;UBERON:0002616!6.43e-22!49;UBERON:0000955!3.09e-21!50;UBERON:0006238!3.09e-21!50;UBERON:0004121!5.24e-20!102;UBERON:0000924!5.24e-20!102;UBERON:0006601!5.24e-20!102;UBERON:0003080!3.21e-19!40;UBERON:0002780!2.09e-18!39;UBERON:0001890!2.09e-18!39;UBERON:0006240!2.09e-18!39;UBERON:0000033!2.53e-18!63;UBERON:0003056!3.92e-18!49;UBERON:0000956!3.49e-16!21;UBERON:0001869!3.49e-16!21;UBERON:0000203!3.49e-16!21;UBERON:0002619!1.84e-12!17;UBERON:0007811!3.67e-10!86;UBERON:0002021!3.71e-10!10;UBERON:0000411!3.71e-10!10;UBERON:0001950!3.71e-10!10;UBERON:0000153!2.42e-08!94;UBERON:0002240!9.56e-08!6;UBERON:0005174!9.56e-08!6;UBERON:0001137!9.56e-08!6;UBERON:0000025!1.12e-07!114;UBERON:0002420!3.08e-07!8;UBERON:0007245!3.08e-07!8;UBERON:0010009!3.08e-07!8;UBERON:0010011!3.08e-07!8;UBERON:0000454!3.08e-07!8;UBERON:0001948!4.77e-07!5;UBERON:0002315!4.77e-07!5;UBERON:0000369!7.00e-07!5;UBERON:0002435!7.00e-07!5;UBERON:0000204!7.00e-07!5;UBERON:0010082!7.00e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.08e-49,34;UBERON:0003528,1.78e-36,29;UBERON:0002791,1.78e-36,29;UBERON:0001893,1.78e-36,29;UBERON:0000073,2.46e-36,54;UBERON:0001017,2.40e-32,73;UBERON:0001016,2.54e-31,75;UBERON:0001049,5.61e-30,52;UBERON:0005068,5.61e-30,52;UBERON:0006241,5.61e-30,52;UBERON:0007135,5.61e-30,52;UBERON:0000956,4.67e-29,21;UBERON:0001869,4.67e-29,21;UBERON:0000203,4.67e-29,21;UBERON:0002780,6.44e-26,39;UBERON:0001890,6.44e-26,39;UBERON:0006240,6.44e-26,39;UBERON:0003080,3.76e-25,40;UBERON:0002619,2.70e-24,17;UBERON:0004121,1.95e-23,95;UBERON:0000924,1.95e-23,95;UBERON:0006601,1.95e-23,95;UBERON:0002346,2.59e-23,64;UBERON:0003075,2.59e-23,64;UBERON:0007284,2.59e-23,64;UBERON:0002021,1.71e-21,10;UBERON:0000411,1.71e-21,10;UBERON:0001950,1.71e-21,10;UBERON:0002616,2.95e-21,46;UBERON:0000955,1.05e-20,47;UBERON:0006238,1.05e-20,47;UBERON:0010371,9.47e-20,73;UBERON:0003056,1.15e-19,49;UBERON:0010314,1.63e-14,92;UBERON:0001948,7.25e-14,5;UBERON:0002315,7.25e-14,5;UBERON:0000025,9.64e-12,114;UBERON:0002240,1.68e-11,6;UBERON:0005174,1.68e-11,6;UBERON:0001137,1.68e-11,6;UBERON:0004111,1.36e-10,122;UBERON:0000369,2.76e-09,5;UBERON:0002435,2.76e-09,5;UBERON:0000204,2.76e-09,5;UBERON:0010082,2.76e-09,5;UBERON:0002257,3.25e-09,3;UBERON:0011216,4.12e-09,194;UBERON:0002420,1.67e-08,8;UBERON:0007245,1.67e-08,8;UBERON:0010009,1.67e-08,8;UBERON:0010011,1.67e-08,8;UBERON:0000454,1.67e-08,8;UBERON:0004684,4.64e-08,3;UBERON:0002275,4.64e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,3.1739458756322,3.80298842103708,0,0,0,0,0,0,0,1.14058573539325,2.43010688997043,1.05162480675691,1.99955689082663,2.42955395046775,1.10241719293459,1.34183659425531,1.83843757322004,1.10115880999389,1.14918604276669,2.4577045320999,2.76961204233407,6.22115976496386,3.64639359389732,1.3959149950069,0,0.30559649555362,6.48182888042069,3.13217697758026,1.67759501242771,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0,0.150722640552623,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.449371918214468,0.915001205637253,1.25654352112864,0.521472960576829,0,0.83115217823824,0,0,0,0,0,0,0.229902104433473,0,0.150704817835715,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,1.02904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,5.52390283808612,2.86447756719698,1.20297227640581,1.37016503954128,4.5323633843382,0,3.15224842256954,2.71885445390523,3.10656187051092,0,1.19707462020309,0,0,0.419226325255965,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:104168001..104168012,+ | |||
}} |
Revision as of 18:27, 12 September 2013
Short description: | p@chr11:104168001..104168012, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:104168001..104168012, + |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.75e-47 | 23 |
neuroblast (sensu Vertebrata) | 2.75e-47 | 23 |
neuron | 1.55e-31 | 33 |
neuronal stem cell | 1.55e-31 | 33 |
neuroblast | 1.55e-31 | 33 |
electrically signaling cell | 1.55e-31 | 33 |
electrically responsive cell | 5.85e-26 | 39 |
electrically active cell | 5.85e-26 | 39 |
neural cell | 4.17e-23 | 43 |
ectodermal cell | 1.79e-22 | 44 |
neurectodermal cell | 1.79e-22 | 44 |
neuron of cerebral cortex | 1.86e-14 | 6 |
embryonic cell | 2.19e-12 | 70 |
granule cell | 1.73e-09 | 3 |
striatum neuron | 1.73e-09 | 3 |
neuron of the ventral spinal cord | 3.25e-09 | 3 |
somatic stem cell | 1.83e-08 | 91 |
multi fate stem cell | 1.83e-08 | 91 |
hippocampal neuron | 4.38e-08 | 3 |
raphe nuclei neuron | 4.64e-08 | 3 |
stem cell | 1.16e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.