FFCP PHASE1:Mm9::chr11:60835625..60835663,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16515|HGNC=|MCL_coexpression_id=121|UniProt=Q8CCR0|association_with_transcript=-402bp_to_ENSMUST00000089184,uc007jgy.2_5end|description=CAGE_peak_3_at_Kcnj12_5end|id=chr11:60835625..60835663,+|ontology_enrichment_celltype=CL:0000540!2.28e-13!33;CL:0000047!2.28e-13!33;CL:0000031!2.28e-13!33;CL:0000404!2.28e-13!33;CL:0002319!2.25e-10!43;CL:0000117!3.32e-10!23;CL:0000337!3.32e-10!23;CL:0000221!7.11e-10!44;CL:0000133!7.11e-10!44;CL:0000393!1.30e-09!39;CL:0000211!1.30e-09!39;CL:0000055!2.25e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.82e-13,23;CL:0000337,1.82e-13,23;CL:0000540,6.61e-12,33;CL:0000047,6.61e-12,33;CL:0000031,6.61e-12,33;CL:0000404,6.61e-12,33;CL:0000393,1.34e-09,39;CL:0000211,1.34e-09,39;CL:0002610,3.79e-09,3;CL:0002614,1.10e-08,3;CL:0002319,2.01e-08,43;CL:0000221,3.66e-08,44;CL:0000133,3.66e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.15e-25!73;UBERON:0005743!4.15e-25!73;UBERON:0000073!1.05e-24!75;UBERON:0001016!1.05e-24!75;UBERON:0002346!8.27e-24!71;UBERON:0003075!8.27e-24!71;UBERON:0007284!8.27e-24!71;UBERON:0004121!5.35e-23!102;UBERON:0000924!5.35e-23!102;UBERON:0006601!5.35e-23!102;UBERON:0000033!1.54e-20!63;UBERON:0001049!5.93e-20!52;UBERON:0005068!5.93e-20!52;UBERON:0006241!5.93e-20!52;UBERON:0007135!5.93e-20!52;UBERON:0000955!1.30e-19!50;UBERON:0006238!1.30e-19!50;UBERON:0002616!6.91e-19!49;UBERON:0003056!2.34e-16!49;UBERON:0002020!4.97e-16!34;UBERON:0003080!8.93e-14!40;UBERON:0002791!3.30e-13!29;UBERON:0003528!3.30e-13!29;UBERON:0001893!3.30e-13!29;UBERON:0002780!5.34e-13!39;UBERON:0001890!5.34e-13!39;UBERON:0006240!5.34e-13!39;UBERON:0007811!6.24e-10!86;UBERON:0000025!2.64e-09!114;UBERON:0004111!1.15e-08!122;UBERON:0000956!1.02e-07!21;UBERON:0001869!1.02e-07!21;UBERON:0000203!1.02e-07!21;UBERON:0000153!1.13e-07!94;UBERON:0002619!1.18e-07!17;UBERON:0002420!2.50e-07!8;UBERON:0007245!2.50e-07!8;UBERON:0010009!2.50e-07!8;UBERON:0010011!2.50e-07!8;UBERON:0000454!2.50e-07!8;UBERON:0003076!4.45e-07!12;UBERON:0003057!4.45e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.56e-35,73;UBERON:0001016,2.11e-34,75;UBERON:0000073,1.49e-33,54;UBERON:0001049,4.01e-29,52;UBERON:0005068,4.01e-29,52;UBERON:0006241,4.01e-29,52;UBERON:0007135,4.01e-29,52;UBERON:0000955,4.60e-28,47;UBERON:0006238,4.60e-28,47;UBERON:0002616,2.31e-26,46;UBERON:0004121,1.04e-25,95;UBERON:0000924,1.04e-25,95;UBERON:0006601,1.04e-25,95;UBERON:0002346,1.75e-24,64;UBERON:0003075,1.75e-24,64;UBERON:0007284,1.75e-24,64;UBERON:0002020,1.88e-21,34;UBERON:0010371,1.07e-20,73;UBERON:0003528,1.23e-20,29;UBERON:0002791,1.23e-20,29;UBERON:0001893,1.23e-20,29;UBERON:0003080,2.32e-20,40;UBERON:0002780,1.42e-18,39;UBERON:0001890,1.42e-18,39;UBERON:0006240,1.42e-18,39;UBERON:0010314,1.92e-16,92;UBERON:0003056,9.23e-16,49;UBERON:0002420,8.48e-15,8;UBERON:0007245,8.48e-15,8;UBERON:0010009,8.48e-15,8;UBERON:0010011,8.48e-15,8;UBERON:0000454,8.48e-15,8;UBERON:0002021,2.84e-14,10;UBERON:0000411,2.84e-14,10;UBERON:0001950,2.84e-14,10;UBERON:0002950,3.71e-11,4;UBERON:0001891,3.71e-11,4;UBERON:0009616,3.71e-11,4;UBERON:0010286,3.71e-11,4;UBERON:0000025,5.83e-11,114;UBERON:0004111,7.77e-10,122;UBERON:0002619,8.63e-10,17;UBERON:0000956,1.61e-09,21;UBERON:0001869,1.61e-09,21;UBERON:0000203,1.61e-09,21;UBERON:0003076,3.12e-09,12;UBERON:0003057,3.12e-09,12;UBERON:0004684,3.79e-09,3;UBERON:0002275,3.79e-09,3;UBERON:0011216,5.80e-09,194;UBERON:0002038,1.10e-08,3;UBERON:0009663,1.10e-08,3;UBERON:0009661,1.10e-08,3;UBERON:0000125,1.10e-08,3;UBERON:0002308,1.10e-08,3;UBERON:0000369,5.28e-08,5;UBERON:0002435,5.28e-08,5;UBERON:0000204,5.28e-08,5;UBERON:0010082,5.28e-08,5;UBERON:0004733,2.12e-07,6;UBERON:0004732,2.12e-07,6;UBERON:0002028,2.12e-07,6;UBERON:0007277,2.12e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0.285650984403804,1.54607978666129,0.367472397644862,0.383381884072945,0,4.40463523997555,5.10749352340751,6.45147439676223,2.50583946687368,2.10421580285542,0.52091337055676,2.79182999001381,3.37657566019008,3.0559649555362,0.883885756421003,0.996601765593721,1.4911955666024,0,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0.144599356919912,0,0.647067399789637,0.441683036920787,0,0,12.296793474485,10.4723353406728,0,0,0,0,4.49371918214468,1.83000241127451,2.38743269014442,2.25971616249959,4.85859368927628,3.1168206683934,2.59586020908412,0,0.373220911830279,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.204109497453984,0.12811372028485,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0.393528463494808,0.308534225774757,0.232533944750408,0.268273401399619,0.700592054203017,0.493679549740441,0.32833492815819,0.810688095458557,1.46199987425332,0.658650345873152,0.805238512562231,1.05144974282064,0.514523061896422,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.58489226135736,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,3.21101179975584,1.87538698547525,0,0,0.94652465824877,0.780877488593277,1.93881057959519,0,0.891194696329576,1.98153571552183,0.809621403349789,0.876767573733936,0.790575555893047,1.92792789853084,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0.532020700926821,0,0.329098041204242,0,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,1.14579102687879,1.54667864109319,2.74033007908257,3.0215755895588,2.70009000092722,2.2516060161211,1.81256963593682,2.07104124700728,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0.412070114477788,0,0.252697211763798,0.25347929989024,0.943131706930381,0.468207537349412,0.256100609619477,0.287177344778066,0,0.579421629724277,0.578727661391115,0,0,0,0.887379030796687,0,0.581385666529314,0.188218760830661,0.930760686808441,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0,0.394017929502254,0.818462086339379,0.309873682371932,0,0.999242311751784,0,0,0.191288332068843,0.441182838239031,0|short_description=p3@Kcnj12}} | ||
|EntrezGene=16515 | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|UniProt=Q8CCR0 | |||
|association_with_transcript=-402bp_to_ENSMUST00000089184,uc007jgy.2_5end | |||
|description=CAGE_peak_3_at_Kcnj12_5end | |||
|id=chr11:60835625..60835663,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.28e-13!33;CL:0000047!2.28e-13!33;CL:0000031!2.28e-13!33;CL:0000404!2.28e-13!33;CL:0002319!2.25e-10!43;CL:0000117!3.32e-10!23;CL:0000337!3.32e-10!23;CL:0000221!7.11e-10!44;CL:0000133!7.11e-10!44;CL:0000393!1.30e-09!39;CL:0000211!1.30e-09!39;CL:0000055!2.25e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.82e-13,23;CL:0000337,1.82e-13,23;CL:0000540,6.61e-12,33;CL:0000047,6.61e-12,33;CL:0000031,6.61e-12,33;CL:0000404,6.61e-12,33;CL:0000393,1.34e-09,39;CL:0000211,1.34e-09,39;CL:0002610,3.79e-09,3;CL:0002614,1.10e-08,3;CL:0002319,2.01e-08,43;CL:0000221,3.66e-08,44;CL:0000133,3.66e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.15e-25!73;UBERON:0005743!4.15e-25!73;UBERON:0000073!1.05e-24!75;UBERON:0001016!1.05e-24!75;UBERON:0002346!8.27e-24!71;UBERON:0003075!8.27e-24!71;UBERON:0007284!8.27e-24!71;UBERON:0004121!5.35e-23!102;UBERON:0000924!5.35e-23!102;UBERON:0006601!5.35e-23!102;UBERON:0000033!1.54e-20!63;UBERON:0001049!5.93e-20!52;UBERON:0005068!5.93e-20!52;UBERON:0006241!5.93e-20!52;UBERON:0007135!5.93e-20!52;UBERON:0000955!1.30e-19!50;UBERON:0006238!1.30e-19!50;UBERON:0002616!6.91e-19!49;UBERON:0003056!2.34e-16!49;UBERON:0002020!4.97e-16!34;UBERON:0003080!8.93e-14!40;UBERON:0002791!3.30e-13!29;UBERON:0003528!3.30e-13!29;UBERON:0001893!3.30e-13!29;UBERON:0002780!5.34e-13!39;UBERON:0001890!5.34e-13!39;UBERON:0006240!5.34e-13!39;UBERON:0007811!6.24e-10!86;UBERON:0000025!2.64e-09!114;UBERON:0004111!1.15e-08!122;UBERON:0000956!1.02e-07!21;UBERON:0001869!1.02e-07!21;UBERON:0000203!1.02e-07!21;UBERON:0000153!1.13e-07!94;UBERON:0002619!1.18e-07!17;UBERON:0002420!2.50e-07!8;UBERON:0007245!2.50e-07!8;UBERON:0010009!2.50e-07!8;UBERON:0010011!2.50e-07!8;UBERON:0000454!2.50e-07!8;UBERON:0003076!4.45e-07!12;UBERON:0003057!4.45e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.56e-35,73;UBERON:0001016,2.11e-34,75;UBERON:0000073,1.49e-33,54;UBERON:0001049,4.01e-29,52;UBERON:0005068,4.01e-29,52;UBERON:0006241,4.01e-29,52;UBERON:0007135,4.01e-29,52;UBERON:0000955,4.60e-28,47;UBERON:0006238,4.60e-28,47;UBERON:0002616,2.31e-26,46;UBERON:0004121,1.04e-25,95;UBERON:0000924,1.04e-25,95;UBERON:0006601,1.04e-25,95;UBERON:0002346,1.75e-24,64;UBERON:0003075,1.75e-24,64;UBERON:0007284,1.75e-24,64;UBERON:0002020,1.88e-21,34;UBERON:0010371,1.07e-20,73;UBERON:0003528,1.23e-20,29;UBERON:0002791,1.23e-20,29;UBERON:0001893,1.23e-20,29;UBERON:0003080,2.32e-20,40;UBERON:0002780,1.42e-18,39;UBERON:0001890,1.42e-18,39;UBERON:0006240,1.42e-18,39;UBERON:0010314,1.92e-16,92;UBERON:0003056,9.23e-16,49;UBERON:0002420,8.48e-15,8;UBERON:0007245,8.48e-15,8;UBERON:0010009,8.48e-15,8;UBERON:0010011,8.48e-15,8;UBERON:0000454,8.48e-15,8;UBERON:0002021,2.84e-14,10;UBERON:0000411,2.84e-14,10;UBERON:0001950,2.84e-14,10;UBERON:0002950,3.71e-11,4;UBERON:0001891,3.71e-11,4;UBERON:0009616,3.71e-11,4;UBERON:0010286,3.71e-11,4;UBERON:0000025,5.83e-11,114;UBERON:0004111,7.77e-10,122;UBERON:0002619,8.63e-10,17;UBERON:0000956,1.61e-09,21;UBERON:0001869,1.61e-09,21;UBERON:0000203,1.61e-09,21;UBERON:0003076,3.12e-09,12;UBERON:0003057,3.12e-09,12;UBERON:0004684,3.79e-09,3;UBERON:0002275,3.79e-09,3;UBERON:0011216,5.80e-09,194;UBERON:0002038,1.10e-08,3;UBERON:0009663,1.10e-08,3;UBERON:0009661,1.10e-08,3;UBERON:0000125,1.10e-08,3;UBERON:0002308,1.10e-08,3;UBERON:0000369,5.28e-08,5;UBERON:0002435,5.28e-08,5;UBERON:0000204,5.28e-08,5;UBERON:0010082,5.28e-08,5;UBERON:0004733,2.12e-07,6;UBERON:0004732,2.12e-07,6;UBERON:0002028,2.12e-07,6;UBERON:0007277,2.12e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0.285650984403804,1.54607978666129,0.367472397644862,0.383381884072945,0,4.40463523997555,5.10749352340751,6.45147439676223,2.50583946687368,2.10421580285542,0.52091337055676,2.79182999001381,3.37657566019008,3.0559649555362,0.883885756421003,0.996601765593721,1.4911955666024,0,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0.144599356919912,0,0.647067399789637,0.441683036920787,0,0,12.296793474485,10.4723353406728,0,0,0,0,4.49371918214468,1.83000241127451,2.38743269014442,2.25971616249959,4.85859368927628,3.1168206683934,2.59586020908412,0,0.373220911830279,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.204109497453984,0.12811372028485,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0.393528463494808,0.308534225774757,0.232533944750408,0.268273401399619,0.700592054203017,0.493679549740441,0.32833492815819,0.810688095458557,1.46199987425332,0.658650345873152,0.805238512562231,1.05144974282064,0.514523061896422,0,0,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.58489226135736,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,3.21101179975584,1.87538698547525,0,0,0.94652465824877,0.780877488593277,1.93881057959519,0,0.891194696329576,1.98153571552183,0.809621403349789,0.876767573733936,0.790575555893047,1.92792789853084,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0.532020700926821,0,0.329098041204242,0,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,1.14579102687879,1.54667864109319,2.74033007908257,3.0215755895588,2.70009000092722,2.2516060161211,1.81256963593682,2.07104124700728,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0.412070114477788,0,0.252697211763798,0.25347929989024,0.943131706930381,0.468207537349412,0.256100609619477,0.287177344778066,0,0.579421629724277,0.578727661391115,0,0,0,0.887379030796687,0,0.581385666529314,0.188218760830661,0.930760686808441,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0,0.394017929502254,0.818462086339379,0.309873682371932,0,0.999242311751784,0,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p3@Kcnj12 | |||
}} |
Revision as of 20:14, 12 September 2013
Short description: | p3@Kcnj12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcnj12_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | -402bp_to_ENSMUST00000089184, uc007jgy.2_5end |
EntrezGene: | Kcnj12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.82e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.82e-13 | 23 |
neuron | 6.61e-12 | 33 |
neuronal stem cell | 6.61e-12 | 33 |
neuroblast | 6.61e-12 | 33 |
electrically signaling cell | 6.61e-12 | 33 |
electrically responsive cell | 1.34e-09 | 39 |
electrically active cell | 1.34e-09 | 39 |
raphe nuclei neuron | 3.79e-09 | 3 |
neuron of the substantia nigra | 1.10e-08 | 3 |
neural cell | 2.01e-08 | 43 |
ectodermal cell | 3.66e-08 | 44 |
neurectodermal cell | 3.66e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.