FFCP PHASE1:Mm9::chr12:88331453..88331471,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:88331453..88331471,-|id=chr12:88331453..88331471,-|ontology_enrichment_celltype=CL:0000117!4.61e-13!23;CL:0000337!4.61e-13!23;CL:0000540!6.57e-12!33;CL:0000047!6.57e-12!33;CL:0000031!6.57e-12!33;CL:0000404!6.57e-12!33;CL:0000393!8.35e-09!39;CL:0000211!8.35e-09!39;CL:0002319!1.59e-08!43;CL:0000221!3.83e-08!44;CL:0000133!3.83e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-19,23;CL:0000337,1.15e-19,23;CL:0000540,3.28e-14,33;CL:0000047,3.28e-14,33;CL:0000031,3.28e-14,33;CL:0000404,3.28e-14,33;CL:0000393,2.07e-11,39;CL:0000211,2.07e-11,39;CL:0002319,5.53e-10,43;CL:0000221,1.14e-09,44;CL:0000133,1.14e-09,44;CL:0002610,3.47e-08,3;CL:0002614,4.14e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.47e-29!75;UBERON:0001016!9.47e-29!75;UBERON:0001017!4.91e-28!73;UBERON:0005743!4.91e-28!73;UBERON:0004121!1.16e-25!102;UBERON:0000924!1.16e-25!102;UBERON:0006601!1.16e-25!102;UBERON:0002346!1.17e-25!71;UBERON:0003075!1.17e-25!71;UBERON:0007284!1.17e-25!71;UBERON:0001049!2.28e-25!52;UBERON:0005068!2.28e-25!52;UBERON:0006241!2.28e-25!52;UBERON:0007135!2.28e-25!52;UBERON:0000955!3.56e-24!50;UBERON:0006238!3.56e-24!50;UBERON:0002616!2.56e-23!49;UBERON:0000033!1.07e-22!63;UBERON:0003056!9.05e-20!49;UBERON:0002020!1.20e-19!34;UBERON:0003080!1.23e-18!40;UBERON:0002780!9.43e-18!39;UBERON:0001890!9.43e-18!39;UBERON:0006240!9.43e-18!39;UBERON:0002791!1.48e-15!29;UBERON:0003528!1.48e-15!29;UBERON:0001893!1.48e-15!29;UBERON:0007811!2.96e-12!86;UBERON:0002021!2.59e-11!10;UBERON:0000411!2.59e-11!10;UBERON:0001950!2.59e-11!10;UBERON:0000153!6.12e-10!94;UBERON:0000956!1.89e-09!21;UBERON:0001869!1.89e-09!21;UBERON:0000203!1.89e-09!21;UBERON:0002420!8.90e-08!8;UBERON:0007245!8.90e-08!8;UBERON:0010009!8.90e-08!8;UBERON:0010011!8.90e-08!8;UBERON:0000454!8.90e-08!8;UBERON:0002619!1.32e-07!17;UBERON:0003076!2.71e-07!12;UBERON:0003057!2.71e-07!12;UBERON:0002298!9.35e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.33e-43,54;UBERON:0001017,4.21e-40,73;UBERON:0001016,8.26e-39,75;UBERON:0001049,1.10e-38,52;UBERON:0005068,1.10e-38,52;UBERON:0006241,1.10e-38,52;UBERON:0007135,1.10e-38,52;UBERON:0002346,4.18e-34,64;UBERON:0003075,4.18e-34,64;UBERON:0007284,4.18e-34,64;UBERON:0002020,8.24e-32,34;UBERON:0004121,1.25e-30,95;UBERON:0000924,1.25e-30,95;UBERON:0006601,1.25e-30,95;UBERON:0000955,1.82e-30,47;UBERON:0006238,1.82e-30,47;UBERON:0010371,6.46e-29,73;UBERON:0002616,6.99e-29,46;UBERON:0003080,2.23e-24,40;UBERON:0003528,1.41e-23,29;UBERON:0002791,1.41e-23,29;UBERON:0001893,1.41e-23,29;UBERON:0002780,9.48e-23,39;UBERON:0001890,9.48e-23,39;UBERON:0006240,9.48e-23,39;UBERON:0002021,2.01e-22,10;UBERON:0000411,2.01e-22,10;UBERON:0001950,2.01e-22,10;UBERON:0010314,2.72e-21,92;UBERON:0003056,1.18e-20,49;UBERON:0003076,6.01e-15,12;UBERON:0003057,6.01e-15,12;UBERON:0002619,1.27e-14,17;UBERON:0000956,1.14e-13,21;UBERON:0001869,1.14e-13,21;UBERON:0000203,1.14e-13,21;UBERON:0000025,1.94e-13,114;UBERON:0004111,4.71e-12,122;UBERON:0002420,9.20e-12,8;UBERON:0007245,9.20e-12,8;UBERON:0010009,9.20e-12,8;UBERON:0010011,9.20e-12,8;UBERON:0000454,9.20e-12,8;UBERON:0002240,9.60e-12,6;UBERON:0005174,9.60e-12,6;UBERON:0001137,9.60e-12,6;UBERON:0001948,5.30e-10,5;UBERON:0002315,5.30e-10,5;UBERON:0011216,9.86e-10,194;UBERON:0002950,5.10e-09,4;UBERON:0001891,5.10e-09,4;UBERON:0009616,5.10e-09,4;UBERON:0010286,5.10e-09,4;UBERON:0004684,3.47e-08,3;UBERON:0002275,3.47e-08,3;UBERON:0000483,1.73e-07,174;UBERON:0000119,2.59e-07,176;UBERON:0002038,4.14e-07,3;UBERON:0009663,4.14e-07,3;UBERON:0009661,4.14e-07,3;UBERON:0000125,4.14e-07,3;UBERON:0002308,4.14e-07,3|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0.210324961351382,6.28432165688368,4.8591079009355,0,0,0,15.4162233399144,28.0912143787413,21.1977015893616,2.90149833006426,2.19570344645783,2.08365348222704,6.14202597803038,7.87867654044352,7.18151764551008,4.12480019663135,3.98640706237488,2.23679334990361,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,1.17112318804619,1.67557365450764,0,0,0,0,7.9389038884556,6.40500843946077,0.753926112677186,15.2965401769203,13.0414883238469,22.648896856992,15.5751612545047,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.272145996605311,0.512454881139399,0.843315521037559,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,0.720332286654991,0,0,0,0,0,0.403367049246685,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74312477948726,6.68106613575558,0,0,0,1.17131623288992,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.713475270408282,0.493647061806363,1.2178597964584,0,0,0,0.16488625294148,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3778034358949,11.9684561491866,9.16632821503035,17.1853182343688,15.0718154349541,12.0863023582352,18.9006300064906,14.8605997063993,20.8445508132734,21.7459330935764,0,0,0.853668028770671,0.486213434136588,0.419226325255965,0.367687016900028,0,0.618105171716683,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.459483751644906,0,0.463537303779422,0,0.824171801606613,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,0.436039249896986,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.679020569229309,0,0.237270036248348,0.394017929502254,0.818462086339379,0.154936841185966,0.964533054905707,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0,0.231867835620421|short_description=p@chr12:88331453..88331471,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:88331453..88331471,- | |||
|id=chr12:88331453..88331471,- | |||
|ontology_enrichment_celltype=CL:0000117!4.61e-13!23;CL:0000337!4.61e-13!23;CL:0000540!6.57e-12!33;CL:0000047!6.57e-12!33;CL:0000031!6.57e-12!33;CL:0000404!6.57e-12!33;CL:0000393!8.35e-09!39;CL:0000211!8.35e-09!39;CL:0002319!1.59e-08!43;CL:0000221!3.83e-08!44;CL:0000133!3.83e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-19,23;CL:0000337,1.15e-19,23;CL:0000540,3.28e-14,33;CL:0000047,3.28e-14,33;CL:0000031,3.28e-14,33;CL:0000404,3.28e-14,33;CL:0000393,2.07e-11,39;CL:0000211,2.07e-11,39;CL:0002319,5.53e-10,43;CL:0000221,1.14e-09,44;CL:0000133,1.14e-09,44;CL:0002610,3.47e-08,3;CL:0002614,4.14e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.47e-29!75;UBERON:0001016!9.47e-29!75;UBERON:0001017!4.91e-28!73;UBERON:0005743!4.91e-28!73;UBERON:0004121!1.16e-25!102;UBERON:0000924!1.16e-25!102;UBERON:0006601!1.16e-25!102;UBERON:0002346!1.17e-25!71;UBERON:0003075!1.17e-25!71;UBERON:0007284!1.17e-25!71;UBERON:0001049!2.28e-25!52;UBERON:0005068!2.28e-25!52;UBERON:0006241!2.28e-25!52;UBERON:0007135!2.28e-25!52;UBERON:0000955!3.56e-24!50;UBERON:0006238!3.56e-24!50;UBERON:0002616!2.56e-23!49;UBERON:0000033!1.07e-22!63;UBERON:0003056!9.05e-20!49;UBERON:0002020!1.20e-19!34;UBERON:0003080!1.23e-18!40;UBERON:0002780!9.43e-18!39;UBERON:0001890!9.43e-18!39;UBERON:0006240!9.43e-18!39;UBERON:0002791!1.48e-15!29;UBERON:0003528!1.48e-15!29;UBERON:0001893!1.48e-15!29;UBERON:0007811!2.96e-12!86;UBERON:0002021!2.59e-11!10;UBERON:0000411!2.59e-11!10;UBERON:0001950!2.59e-11!10;UBERON:0000153!6.12e-10!94;UBERON:0000956!1.89e-09!21;UBERON:0001869!1.89e-09!21;UBERON:0000203!1.89e-09!21;UBERON:0002420!8.90e-08!8;UBERON:0007245!8.90e-08!8;UBERON:0010009!8.90e-08!8;UBERON:0010011!8.90e-08!8;UBERON:0000454!8.90e-08!8;UBERON:0002619!1.32e-07!17;UBERON:0003076!2.71e-07!12;UBERON:0003057!2.71e-07!12;UBERON:0002298!9.35e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.33e-43,54;UBERON:0001017,4.21e-40,73;UBERON:0001016,8.26e-39,75;UBERON:0001049,1.10e-38,52;UBERON:0005068,1.10e-38,52;UBERON:0006241,1.10e-38,52;UBERON:0007135,1.10e-38,52;UBERON:0002346,4.18e-34,64;UBERON:0003075,4.18e-34,64;UBERON:0007284,4.18e-34,64;UBERON:0002020,8.24e-32,34;UBERON:0004121,1.25e-30,95;UBERON:0000924,1.25e-30,95;UBERON:0006601,1.25e-30,95;UBERON:0000955,1.82e-30,47;UBERON:0006238,1.82e-30,47;UBERON:0010371,6.46e-29,73;UBERON:0002616,6.99e-29,46;UBERON:0003080,2.23e-24,40;UBERON:0003528,1.41e-23,29;UBERON:0002791,1.41e-23,29;UBERON:0001893,1.41e-23,29;UBERON:0002780,9.48e-23,39;UBERON:0001890,9.48e-23,39;UBERON:0006240,9.48e-23,39;UBERON:0002021,2.01e-22,10;UBERON:0000411,2.01e-22,10;UBERON:0001950,2.01e-22,10;UBERON:0010314,2.72e-21,92;UBERON:0003056,1.18e-20,49;UBERON:0003076,6.01e-15,12;UBERON:0003057,6.01e-15,12;UBERON:0002619,1.27e-14,17;UBERON:0000956,1.14e-13,21;UBERON:0001869,1.14e-13,21;UBERON:0000203,1.14e-13,21;UBERON:0000025,1.94e-13,114;UBERON:0004111,4.71e-12,122;UBERON:0002420,9.20e-12,8;UBERON:0007245,9.20e-12,8;UBERON:0010009,9.20e-12,8;UBERON:0010011,9.20e-12,8;UBERON:0000454,9.20e-12,8;UBERON:0002240,9.60e-12,6;UBERON:0005174,9.60e-12,6;UBERON:0001137,9.60e-12,6;UBERON:0001948,5.30e-10,5;UBERON:0002315,5.30e-10,5;UBERON:0011216,9.86e-10,194;UBERON:0002950,5.10e-09,4;UBERON:0001891,5.10e-09,4;UBERON:0009616,5.10e-09,4;UBERON:0010286,5.10e-09,4;UBERON:0004684,3.47e-08,3;UBERON:0002275,3.47e-08,3;UBERON:0000483,1.73e-07,174;UBERON:0000119,2.59e-07,176;UBERON:0002038,4.14e-07,3;UBERON:0009663,4.14e-07,3;UBERON:0009661,4.14e-07,3;UBERON:0000125,4.14e-07,3;UBERON:0002308,4.14e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0.210324961351382,6.28432165688368,4.8591079009355,0,0,0,15.4162233399144,28.0912143787413,21.1977015893616,2.90149833006426,2.19570344645783,2.08365348222704,6.14202597803038,7.87867654044352,7.18151764551008,4.12480019663135,3.98640706237488,2.23679334990361,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,1.17112318804619,1.67557365450764,0,0,0,0,7.9389038884556,6.40500843946077,0.753926112677186,15.2965401769203,13.0414883238469,22.648896856992,15.5751612545047,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.272145996605311,0.512454881139399,0.843315521037559,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,0.720332286654991,0,0,0,0,0,0.403367049246685,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74312477948726,6.68106613575558,0,0,0,1.17131623288992,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.713475270408282,0.493647061806363,1.2178597964584,0,0,0,0.16488625294148,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3778034358949,11.9684561491866,9.16632821503035,17.1853182343688,15.0718154349541,12.0863023582352,18.9006300064906,14.8605997063993,20.8445508132734,21.7459330935764,0,0,0.853668028770671,0.486213434136588,0.419226325255965,0.367687016900028,0,0.618105171716683,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.459483751644906,0,0.463537303779422,0,0.824171801606613,0.147198920134397,0.342869252385415,0.532427418478012,0.476872379894642,0.436039249896986,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.679020569229309,0,0.237270036248348,0.394017929502254,0.818462086339379,0.154936841185966,0.964533054905707,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr12:88331453..88331471,- | |||
}} |
Revision as of 23:33, 12 September 2013
Short description: | p@chr12:88331453..88331471, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:88331453..88331471, - |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.15e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-19 | 23 |
neuron | 3.28e-14 | 33 |
neuronal stem cell | 3.28e-14 | 33 |
neuroblast | 3.28e-14 | 33 |
electrically signaling cell | 3.28e-14 | 33 |
electrically responsive cell | 2.07e-11 | 39 |
electrically active cell | 2.07e-11 | 39 |
neural cell | 5.53e-10 | 43 |
ectodermal cell | 1.14e-09 | 44 |
neurectodermal cell | 1.14e-09 | 44 |
raphe nuclei neuron | 3.47e-08 | 3 |
neuron of the substantia nigra | 4.14e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.