FFCP PHASE1:Hg19::chr4:176734368..176734405,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2823|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4460|TSSclassifier=N|UniProt=P51674,Q86YB0|association_with_transcript=-186bp_to_NM_201591,uc003iuf.2_5end|coexpression_cluster_id=C1259|description=CAGE_peak_19_at_GPM6A_5end|id=chr4:176734368..176734405,-|ontology_enrichment_celltype=CL:0000047!6.67e-09!8;CL:0000540!4.15e-07!6;CL:0000031!4.15e-07!6;CL:0000404!4.15e-07!6|ontology_enrichment_celltype_v019=CL:0000540;3.23e-12;6!CL:0000404;3.23e-12;6!CL:0002319;1.00e-09;25|ontology_enrichment_celltype_v019_2=CL:0000047,1.13e-15,8;CL:0000540,3.12e-12,6;CL:0000031,3.12e-12,6;CL:0000404,3.12e-12,6;CL:0002319,9.94e-10,25|ontology_enrichment_development_v019=CL:0000031;3.23e-12;6!UBERON:0006238;3.11e-11;10!UBERON:0006601;6.01e-10;82!UBERON:0005425;1.65e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.49e-76!82;UBERON:0005743!6.86e-72!86;UBERON:0000073!7.80e-68!94;UBERON:0001016!7.80e-68!94;UBERON:0002619!7.99e-66!22;UBERON:0001893!1.25e-65!34;UBERON:0002020!1.44e-65!34;UBERON:0003528!1.44e-65!34;UBERON:0000955!6.74e-65!69;UBERON:0006238!6.74e-65!69;UBERON:0001869!1.47e-64!32;UBERON:0002791!4.33e-62!33;UBERON:0001950!1.05e-58!20;UBERON:0001049!2.11e-58!57;UBERON:0005068!2.11e-58!57;UBERON:0006241!2.11e-58!57;UBERON:0007135!2.11e-58!57;UBERON:0002780!3.85e-58!41;UBERON:0001890!3.85e-58!41;UBERON:0006240!3.85e-58!41;UBERON:0000956!1.21e-57!25;UBERON:0000203!1.21e-57!25;UBERON:0003080!1.23e-56!42;UBERON:0002616!3.33e-56!59;UBERON:0003075!8.69e-42!86;UBERON:0007284!8.69e-42!86;UBERON:0002346!1.33e-39!90;UBERON:0003056!2.79e-37!61;UBERON:0000153!1.58e-35!129;UBERON:0007811!1.58e-35!129;UBERON:0000033!1.86e-35!123;UBERON:0004121!3.43e-34!169;UBERON:0007023!8.53e-34!115;UBERON:0000924!3.36e-33!173;UBERON:0006601!3.36e-33!173;UBERON:0000200!1.39e-24!6;UBERON:0001872!7.15e-21!5;UBERON:0001871!8.73e-18!7;UBERON:0002771!3.25e-13!3;UBERON:0002021!6.10e-13!5;UBERON:0000349!1.37e-12!5;UBERON:0000025!3.60e-12!194;UBERON:0000988!4.89e-12!3;UBERON:0002308!1.70e-10!9;UBERON:0000125!1.70e-10!9;UBERON:0004732!4.28e-10!13;UBERON:0001870!2.33e-09!2;UBERON:0000369!3.19e-09!4;UBERON:0002435!3.19e-09!4;UBERON:0000204!3.19e-09!4;UBERON:0010082!3.19e-09!4;UBERON:0000064!3.54e-09!219;UBERON:0001954!8.84e-09!2;UBERON:0003022!8.84e-09!2;UBERON:0002421!8.84e-09!2;UBERON:0002600!8.84e-09!2;UBERON:0002148!1.17e-08!2;UBERON:0009662!1.17e-08!2;UBERON:0005162!1.21e-08!2;UBERON:0000122!1.21e-08!2;UBERON:0002360!1.31e-08!2;UBERON:0000094!1.31e-08!2;UBERON:0007645!1.31e-08!2;UBERON:0004111!1.91e-08!241;UBERON:0002298!9.90e-08!8;UBERON:0004733!1.00e-07!12;UBERON:0002028!1.00e-07!12;UBERON:0007277!1.00e-07!12;UBERON:0000475!3.62e-07!365;UBERON:0002680!5.69e-07!9;UBERON:0001895!5.69e-07!9;UBERON:0010092!5.69e-07!9;UBERON:0002420!6.59e-07!9;UBERON:0007245!6.59e-07!9;UBERON:0010009!6.59e-07!9;UBERON:0010011!6.59e-07!9;UBERON:0000454!6.59e-07!9|ontology_enrichment_uberon_v019=UBERON:0001950;7.54e-57;20!UBERON:0002619;1.04e-51;22!UBERON:0000956;1.75e-45;25!UBERON:0000203;1.75e-45;25!UBERON:0000200;1.15e-43;6!UBERON:0001869;1.14e-41;32!UBERON:0001893;6.02e-38;34!UBERON:0001872;1.33e-36;5!UBERON:0003528;2.89e-36;34!UBERON:0002020;2.89e-36;34!UBERON:0002791;1.27e-35;32!UBERON:0002780;1.62e-24;41!UBERON:0001890;1.62e-24;41!UBERON:0001870;1.10e-22;3!UBERON:0000073;6.65e-18;53!UBERON:0002616;6.65e-18;53!UBERON:0001016;1.01e-17;83!UBERON:0001017;1.79e-17;75!UBERON:0000955;5.32e-17;68!UBERON:0002702;6.29e-16;2!UBERON:0002771;8.18e-16;2!UBERON:0001871;4.28e-10;6!UBERON:0002022;9.73e-09;1!UBERON:0007190;9.73e-09;1!UBERON:0002581;1.65e-08;1!UBERON:0001882;1.65e-08;1!UBERON:0003112;1.65e-08;1!UBERON:0000941;1.65e-08;1!UBERON:0001785;1.65e-08;1!UBERON:0002464;1.65e-08;1!UBERON:0004904;1.65e-08;1!UBERON:0011158;1.65e-08;1!UBERON:0001021;1.65e-08;1!UBERON:0003128;1.65e-08;1!UBERON:0005403;1.65e-08;1!UBERON:0001703;1.65e-08;1!UBERON:0002241;1.65e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0001950,6.14e-57,20;UBERON:0002619,8.59e-52,22;UBERON:0001017,1.72e-47,81;UBERON:0001869,3.03e-47,32;UBERON:0001016,2.86e-46,89;UBERON:0000956,1.48e-45,25;UBERON:0000203,1.48e-45,25;UBERON:0001893,2.16e-44,34;UBERON:0000200,1.60e-43,6;UBERON:0002791,4.82e-41,32;UBERON:0003528,1.48e-38,34;UBERON:0002020,1.48e-38,34;UBERON:0001872,9.88e-37,5;UBERON:0002780,1.53e-36,41;UBERON:0001890,1.53e-36,41;UBERON:0003080,1.53e-36,41;UBERON:0006240,1.53e-36,41;UBERON:0000955,1.39e-34,68;UBERON:0006238,1.39e-34,68;UBERON:0000073,8.23e-28,53;UBERON:0002616,8.23e-28,53;UBERON:0003056,2.83e-27,61;UBERON:0001049,3.34e-26,56;UBERON:0005068,3.34e-26,56;UBERON:0006241,3.34e-26,56;UBERON:0007135,3.34e-26,56;UBERON:0001870,9.51e-23,3;UBERON:0004121,1.50e-22,171;UBERON:0000924,1.50e-22,171;UBERON:0006601,1.50e-22,171;UBERON:0011216,1.08e-19,223;UBERON:0003075,1.27e-19,82;UBERON:0007284,1.27e-19,82;UBERON:0002346,1.39e-18,86;UBERON:0002702,6.29e-16,2;UBERON:0002771,9.87e-16,2;UBERON:0010371,6.95e-15,104;UBERON:0010314,9.58e-13,132;UBERON:0007023,1.61e-11,114;UBERON:0001871,4.34e-10,6;UBERON:0002022,1.05e-08,1;UBERON:0007190,1.13e-08,1;UBERON:0003112,1.22e-08,1;UBERON:0011158,1.22e-08,1;UBERON:0003128,1.22e-08,1;UBERON:0001703,1.22e-08,1;UBERON:0002241,1.22e-08,1;UBERON:0004761,1.22e-08,1;UBERON:0009617,1.22e-08,1;UBERON:0002581,1.65e-08,1;UBERON:0000941,1.78e-08,1;UBERON:0001785,1.78e-08,1;UBERON:0002464,1.78e-08,1;UBERON:0004904,1.78e-08,1;UBERON:0001021,1.78e-08,1;UBERON:0003902,1.78e-08,1;UBERON:0005425,1.78e-08,1;UBERON:0001882,2.22e-08,1;UBERON:0005403,2.22e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90419561572865,3.86644406388848,18.0917566561097,9.56908127479745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,2.31920245404628,5.98841394003583,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.552896299656123,0,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,2.75465485467441,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.64608069485285,0,0,0,0,0,0,0,0,0,0,3.26170094576674,4.07951100618099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,2.30848315300494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,4.27091927156871,2.3786276834235,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09189682663981,0,0.638535436228605,0.82046545696302,6.30179240554295,0.138314504928436,1.77623210195036,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09366512317023,1.56215619722769,3.72036233702131,1.71222687523548,8.75159694429151,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,1.51277379194553,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.951880862672806,5.23620828408453,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p19@GPM6A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2823 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4460 | |||
|TSSclassifier=N | |||
|UniProt=P51674,Q86YB0 | |||
|association_with_transcript=-186bp_to_NM_201591,uc003iuf.2_5end | |||
|coexpression_cluster_id=C1259 | |||
|description=CAGE_peak_19_at_GPM6A_5end | |||
|id=chr4:176734368..176734405,- | |||
|ontology_enrichment_celltype=CL:0000047!6.67e-09!8;CL:0000540!4.15e-07!6;CL:0000031!4.15e-07!6;CL:0000404!4.15e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.23e-12;6!CL:0000404;3.23e-12;6!CL:0002319;1.00e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.13e-15,8;CL:0000540,3.12e-12,6;CL:0000031,3.12e-12,6;CL:0000404,3.12e-12,6;CL:0002319,9.94e-10,25 | |||
|ontology_enrichment_development_v019=CL:0000031;3.23e-12;6!UBERON:0006238;3.11e-11;10!UBERON:0006601;6.01e-10;82!UBERON:0005425;1.65e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p19@GPM6A | |||
}} |
Revision as of 10:06, 13 September 2013
Short description: | p19@GPM6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_GPM6A_5end |
Coexpression cluster: | C1259_Neurons_parietal_occipital_temporal_brain_duodenum_glioblastoma |
Association with transcript: | -186bp_to_NM_201591, uc003iuf.2_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | P51674Q86YB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.13e-15 | 8 |
neuron | 3.12e-12 | 6 |
neuroblast | 3.12e-12 | 6 |
electrically signaling cell | 3.12e-12 | 6 |
neural cell | 9.94e-10 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.