FFCP PHASE1:Mm9::chr15:82086621..82086634,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=76505|HGNC=|MCL_coexpression_id=270|UniProt=D3YWK9|association_with_transcript=168bp_to_ENSMUST00000143238,NR_037698,uc007wyp.2_5end|description=CAGE_peak_3_at_1500009C09Rik_5end|id=chr15:82086621..82086634,+|ontology_enrichment_celltype=CL:0000117!2.56e-24!23;CL:0000337!2.56e-24!23;CL:0002319!6.82e-19!43;CL:0000221!3.07e-18!44;CL:0000133!3.07e-18!44;CL:0000540!5.31e-16!33;CL:0000047!5.31e-16!33;CL:0000031!5.31e-16!33;CL:0000404!5.31e-16!33;CL:0000055!6.88e-15!50;CL:0000393!2.29e-12!39;CL:0000211!2.29e-12!39;CL:0002321!4.46e-08!70;CL:0000220!4.46e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,2.76e-20,23;CL:0000337,2.76e-20,23;CL:0002319,5.79e-17,43;CL:0000221,1.87e-16,44;CL:0000133,1.87e-16,44;CL:0000540,6.58e-13,33;CL:0000047,6.58e-13,33;CL:0000031,6.58e-13,33;CL:0000404,6.58e-13,33;CL:0000393,2.57e-10,39;CL:0000211,2.57e-10,39;CL:0002321,2.12e-08,70;CL:0002614,5.11e-08,3;CL:0002610,6.93e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.96e-43!73;UBERON:0005743!5.96e-43!73;UBERON:0000073!2.47e-41!75;UBERON:0001016!2.47e-41!75;UBERON:0001049!7.73e-37!52;UBERON:0005068!7.73e-37!52;UBERON:0006241!7.73e-37!52;UBERON:0007135!7.73e-37!52;UBERON:0000955!1.40e-34!50;UBERON:0006238!1.40e-34!50;UBERON:0002616!1.56e-33!49;UBERON:0002020!3.84e-32!34;UBERON:0004121!8.59e-27!102;UBERON:0000924!8.59e-27!102;UBERON:0006601!8.59e-27!102;UBERON:0002791!4.29e-26!29;UBERON:0003528!4.29e-26!29;UBERON:0001893!4.29e-26!29;UBERON:0000033!8.60e-26!63;UBERON:0003080!6.90e-25!40;UBERON:0002346!3.04e-24!71;UBERON:0003075!3.04e-24!71;UBERON:0007284!3.04e-24!71;UBERON:0002780!1.11e-23!39;UBERON:0001890!1.11e-23!39;UBERON:0006240!1.11e-23!39;UBERON:0003056!1.69e-19!49;UBERON:0000956!2.57e-17!21;UBERON:0001869!2.57e-17!21;UBERON:0000203!2.57e-17!21;UBERON:0007811!2.73e-15!86;UBERON:0002619!2.52e-14!17;UBERON:0000153!6.77e-13!94;UBERON:0003076!3.31e-12!12;UBERON:0003057!3.31e-12!12;UBERON:0002021!6.25e-11!10;UBERON:0000411!6.25e-11!10;UBERON:0001950!6.25e-11!10;UBERON:0002420!5.91e-10!8;UBERON:0007245!5.91e-10!8;UBERON:0010009!5.91e-10!8;UBERON:0010011!5.91e-10!8;UBERON:0000454!5.91e-10!8;UBERON:0000025!2.04e-09!114;UBERON:0002298!5.90e-09!6;UBERON:0002240!2.95e-08!6;UBERON:0005174!2.95e-08!6;UBERON:0001137!2.95e-08!6;UBERON:0004111!5.23e-08!122;UBERON:0001948!3.64e-07!5;UBERON:0002315!3.64e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.46e-47,73;UBERON:0001016,1.09e-45,75;UBERON:0000073,3.33e-40,54;UBERON:0001049,3.98e-36,52;UBERON:0005068,3.98e-36,52;UBERON:0006241,3.98e-36,52;UBERON:0007135,3.98e-36,52;UBERON:0004121,3.53e-34,95;UBERON:0000924,3.53e-34,95;UBERON:0006601,3.53e-34,95;UBERON:0000955,1.55e-29,47;UBERON:0006238,1.55e-29,47;UBERON:0002020,9.39e-29,34;UBERON:0002616,4.30e-28,46;UBERON:0002346,7.37e-28,64;UBERON:0003075,7.37e-28,64;UBERON:0007284,7.37e-28,64;UBERON:0010371,1.92e-23,73;UBERON:0003528,1.81e-22,29;UBERON:0002791,1.81e-22,29;UBERON:0001893,1.81e-22,29;UBERON:0003080,3.93e-21,40;UBERON:0002780,1.52e-19,39;UBERON:0001890,1.52e-19,39;UBERON:0006240,1.52e-19,39;UBERON:0002021,5.28e-17,10;UBERON:0000411,5.28e-17,10;UBERON:0001950,5.28e-17,10;UBERON:0010314,5.82e-17,92;UBERON:0003076,1.90e-16,12;UBERON:0003057,1.90e-16,12;UBERON:0003056,3.41e-16,49;UBERON:0002420,2.15e-15,8;UBERON:0007245,2.15e-15,8;UBERON:0010009,2.15e-15,8;UBERON:0010011,2.15e-15,8;UBERON:0000454,2.15e-15,8;UBERON:0000025,3.61e-12,114;UBERON:0011216,4.95e-12,194;UBERON:0002619,2.18e-11,17;UBERON:0004111,7.35e-11,122;UBERON:0000956,1.28e-10,21;UBERON:0001869,1.28e-10,21;UBERON:0000203,1.28e-10,21;UBERON:0002950,5.15e-10,4;UBERON:0001891,5.15e-10,4;UBERON:0009616,5.15e-10,4;UBERON:0010286,5.15e-10,4;UBERON:0002240,2.17e-09,6;UBERON:0005174,2.17e-09,6;UBERON:0001137,2.17e-09,6;UBERON:0000369,4.50e-09,5;UBERON:0002435,4.50e-09,5;UBERON:0000204,4.50e-09,5;UBERON:0010082,4.50e-09,5;UBERON:0004733,1.39e-08,6;UBERON:0004732,1.39e-08,6;UBERON:0002028,1.39e-08,6;UBERON:0007277,1.39e-08,6;UBERON:0002038,5.11e-08,3;UBERON:0009663,5.11e-08,3;UBERON:0009661,5.11e-08,3;UBERON:0000125,5.11e-08,3;UBERON:0002308,5.11e-08,3;UBERON:0004684,6.93e-08,3;UBERON:0002275,6.93e-08,3;UBERON:0001948,1.23e-07,5;UBERON:0002315,1.23e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,0,0.194429899074283,1.81982348112971,2.87505128729943,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,6.2916023208865,13.4476406862544,0.414758449233911,0.135005938331691,0.630974884054146,8.2838785477103,14.3564551618549,0.857435594504678,0.383381884072945,0.919218786610021,8.8092704799511,7.91661496128164,17.2039317246993,1.84640802822271,1.09785172322892,1.04182674111352,17.0301629390842,15.757353080887,12.071061574368,5.00868595305235,5.69486723196412,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,3.14170060220183,0,0,0,0,7.04016005202667,2.74500361691176,2.51308704225729,2.78118912307642,3.06858548796397,6.85700547046548,5.353961681236,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,4.57125577709592,0,0,0,0,0,0,0,0,0,0,0.395287777946524,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,2.86447756719698,2.92150409984269,2.74033007908257,1.5107877947794,4.05013500139084,1.35096360967266,1.35942722695261,1.03552062350364,0,0,0,0,0,0.183843508450014,0,0.412070114477788,0,0.758091635291392,0.25347929989024,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0,0.188218760830661,0.423073039458382,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0.999242311751784,0,0,0,0.441182838239031,0.231867835620421|short_description=p3@1500009C09Rik}} | ||
|EntrezGene=76505 | |||
|HGNC= | |||
|MCL_coexpression_id=270 | |||
|UniProt=D3YWK9 | |||
|association_with_transcript=168bp_to_ENSMUST00000143238,NR_037698,uc007wyp.2_5end | |||
|description=CAGE_peak_3_at_1500009C09Rik_5end | |||
|id=chr15:82086621..82086634,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.56e-24!23;CL:0000337!2.56e-24!23;CL:0002319!6.82e-19!43;CL:0000221!3.07e-18!44;CL:0000133!3.07e-18!44;CL:0000540!5.31e-16!33;CL:0000047!5.31e-16!33;CL:0000031!5.31e-16!33;CL:0000404!5.31e-16!33;CL:0000055!6.88e-15!50;CL:0000393!2.29e-12!39;CL:0000211!2.29e-12!39;CL:0002321!4.46e-08!70;CL:0000220!4.46e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.76e-20,23;CL:0000337,2.76e-20,23;CL:0002319,5.79e-17,43;CL:0000221,1.87e-16,44;CL:0000133,1.87e-16,44;CL:0000540,6.58e-13,33;CL:0000047,6.58e-13,33;CL:0000031,6.58e-13,33;CL:0000404,6.58e-13,33;CL:0000393,2.57e-10,39;CL:0000211,2.57e-10,39;CL:0002321,2.12e-08,70;CL:0002614,5.11e-08,3;CL:0002610,6.93e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.96e-43!73;UBERON:0005743!5.96e-43!73;UBERON:0000073!2.47e-41!75;UBERON:0001016!2.47e-41!75;UBERON:0001049!7.73e-37!52;UBERON:0005068!7.73e-37!52;UBERON:0006241!7.73e-37!52;UBERON:0007135!7.73e-37!52;UBERON:0000955!1.40e-34!50;UBERON:0006238!1.40e-34!50;UBERON:0002616!1.56e-33!49;UBERON:0002020!3.84e-32!34;UBERON:0004121!8.59e-27!102;UBERON:0000924!8.59e-27!102;UBERON:0006601!8.59e-27!102;UBERON:0002791!4.29e-26!29;UBERON:0003528!4.29e-26!29;UBERON:0001893!4.29e-26!29;UBERON:0000033!8.60e-26!63;UBERON:0003080!6.90e-25!40;UBERON:0002346!3.04e-24!71;UBERON:0003075!3.04e-24!71;UBERON:0007284!3.04e-24!71;UBERON:0002780!1.11e-23!39;UBERON:0001890!1.11e-23!39;UBERON:0006240!1.11e-23!39;UBERON:0003056!1.69e-19!49;UBERON:0000956!2.57e-17!21;UBERON:0001869!2.57e-17!21;UBERON:0000203!2.57e-17!21;UBERON:0007811!2.73e-15!86;UBERON:0002619!2.52e-14!17;UBERON:0000153!6.77e-13!94;UBERON:0003076!3.31e-12!12;UBERON:0003057!3.31e-12!12;UBERON:0002021!6.25e-11!10;UBERON:0000411!6.25e-11!10;UBERON:0001950!6.25e-11!10;UBERON:0002420!5.91e-10!8;UBERON:0007245!5.91e-10!8;UBERON:0010009!5.91e-10!8;UBERON:0010011!5.91e-10!8;UBERON:0000454!5.91e-10!8;UBERON:0000025!2.04e-09!114;UBERON:0002298!5.90e-09!6;UBERON:0002240!2.95e-08!6;UBERON:0005174!2.95e-08!6;UBERON:0001137!2.95e-08!6;UBERON:0004111!5.23e-08!122;UBERON:0001948!3.64e-07!5;UBERON:0002315!3.64e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.46e-47,73;UBERON:0001016,1.09e-45,75;UBERON:0000073,3.33e-40,54;UBERON:0001049,3.98e-36,52;UBERON:0005068,3.98e-36,52;UBERON:0006241,3.98e-36,52;UBERON:0007135,3.98e-36,52;UBERON:0004121,3.53e-34,95;UBERON:0000924,3.53e-34,95;UBERON:0006601,3.53e-34,95;UBERON:0000955,1.55e-29,47;UBERON:0006238,1.55e-29,47;UBERON:0002020,9.39e-29,34;UBERON:0002616,4.30e-28,46;UBERON:0002346,7.37e-28,64;UBERON:0003075,7.37e-28,64;UBERON:0007284,7.37e-28,64;UBERON:0010371,1.92e-23,73;UBERON:0003528,1.81e-22,29;UBERON:0002791,1.81e-22,29;UBERON:0001893,1.81e-22,29;UBERON:0003080,3.93e-21,40;UBERON:0002780,1.52e-19,39;UBERON:0001890,1.52e-19,39;UBERON:0006240,1.52e-19,39;UBERON:0002021,5.28e-17,10;UBERON:0000411,5.28e-17,10;UBERON:0001950,5.28e-17,10;UBERON:0010314,5.82e-17,92;UBERON:0003076,1.90e-16,12;UBERON:0003057,1.90e-16,12;UBERON:0003056,3.41e-16,49;UBERON:0002420,2.15e-15,8;UBERON:0007245,2.15e-15,8;UBERON:0010009,2.15e-15,8;UBERON:0010011,2.15e-15,8;UBERON:0000454,2.15e-15,8;UBERON:0000025,3.61e-12,114;UBERON:0011216,4.95e-12,194;UBERON:0002619,2.18e-11,17;UBERON:0004111,7.35e-11,122;UBERON:0000956,1.28e-10,21;UBERON:0001869,1.28e-10,21;UBERON:0000203,1.28e-10,21;UBERON:0002950,5.15e-10,4;UBERON:0001891,5.15e-10,4;UBERON:0009616,5.15e-10,4;UBERON:0010286,5.15e-10,4;UBERON:0002240,2.17e-09,6;UBERON:0005174,2.17e-09,6;UBERON:0001137,2.17e-09,6;UBERON:0000369,4.50e-09,5;UBERON:0002435,4.50e-09,5;UBERON:0000204,4.50e-09,5;UBERON:0010082,4.50e-09,5;UBERON:0004733,1.39e-08,6;UBERON:0004732,1.39e-08,6;UBERON:0002028,1.39e-08,6;UBERON:0007277,1.39e-08,6;UBERON:0002038,5.11e-08,3;UBERON:0009663,5.11e-08,3;UBERON:0009661,5.11e-08,3;UBERON:0000125,5.11e-08,3;UBERON:0002308,5.11e-08,3;UBERON:0004684,6.93e-08,3;UBERON:0002275,6.93e-08,3;UBERON:0001948,1.23e-07,5;UBERON:0002315,1.23e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,0,0.194429899074283,1.81982348112971,2.87505128729943,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0,0,0,0,0,6.2916023208865,13.4476406862544,0.414758449233911,0.135005938331691,0.630974884054146,8.2838785477103,14.3564551618549,0.857435594504678,0.383381884072945,0.919218786610021,8.8092704799511,7.91661496128164,17.2039317246993,1.84640802822271,1.09785172322892,1.04182674111352,17.0301629390842,15.757353080887,12.071061574368,5.00868595305235,5.69486723196412,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,3.14170060220183,0,0,0,0,7.04016005202667,2.74500361691176,2.51308704225729,2.78118912307642,3.06858548796397,6.85700547046548,5.353961681236,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,4.57125577709592,0,0,0,0,0,0,0,0,0,0,0.395287777946524,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,2.86447756719698,2.92150409984269,2.74033007908257,1.5107877947794,4.05013500139084,1.35096360967266,1.35942722695261,1.03552062350364,0,0,0,0,0,0.183843508450014,0,0.412070114477788,0,0.758091635291392,0.25347929989024,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0,0.188218760830661,0.423073039458382,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0.999242311751784,0,0,0,0.441182838239031,0.231867835620421 | |||
|short_description=p3@1500009C09Rik | |||
}} |
Revision as of 11:20, 13 September 2013
Short description: | p3@1500009C09Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_1500009C09Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | 168bp_to_ENSMUST00000143238, NR_037698, uc007wyp.2_5end |
EntrezGene: | 1500009C09Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.76e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.76e-20 | 23 |
neural cell | 5.79e-17 | 43 |
ectodermal cell | 1.87e-16 | 44 |
neurectodermal cell | 1.87e-16 | 44 |
neuron | 6.58e-13 | 33 |
neuronal stem cell | 6.58e-13 | 33 |
neuroblast | 6.58e-13 | 33 |
electrically signaling cell | 6.58e-13 | 33 |
electrically responsive cell | 2.57e-10 | 39 |
electrically active cell | 2.57e-10 | 39 |
embryonic cell | 2.12e-08 | 70 |
neuron of the substantia nigra | 5.11e-08 | 3 |
raphe nuclei neuron | 6.93e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.