FFCP PHASE1:Mm9::chr17:90828590..90828596,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=904|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:90828590..90828596,-|id=chr17:90828590..90828596,-|ontology_enrichment_celltype=CL:0000117!1.43e-19!23;CL:0000337!1.43e-19!23;CL:0000540!6.71e-19!33;CL:0000047!6.71e-19!33;CL:0000031!6.71e-19!33;CL:0000404!6.71e-19!33;CL:0000221!1.82e-15!44;CL:0000133!1.82e-15!44;CL:0002319!2.83e-15!43;CL:0000393!3.07e-15!39;CL:0000211!3.07e-15!39;CL:0000055!2.82e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-34,23;CL:0000337,1.15e-34,23;CL:0000540,1.90e-30,33;CL:0000047,1.90e-30,33;CL:0000031,1.90e-30,33;CL:0000404,1.90e-30,33;CL:0000393,7.08e-25,39;CL:0000211,7.08e-25,39;CL:0002319,4.99e-22,43;CL:0000221,2.13e-21,44;CL:0000133,2.13e-21,44;CL:0002321,2.32e-11,70;CL:0002612,2.04e-08,3;CL:0002614,5.91e-08,3;CL:0000723,1.69e-07,91;CL:0000048,1.69e-07,91;CL:0002613,2.87e-07,3;CL:0002610,4.47e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.82e-29!75;UBERON:0001016!5.82e-29!75;UBERON:0001017!2.43e-28!73;UBERON:0005743!2.43e-28!73;UBERON:0001049!2.72e-26!52;UBERON:0005068!2.72e-26!52;UBERON:0006241!2.72e-26!52;UBERON:0007135!2.72e-26!52;UBERON:0002346!1.05e-24!71;UBERON:0003075!1.05e-24!71;UBERON:0007284!1.05e-24!71;UBERON:0002020!2.06e-24!34;UBERON:0002616!4.14e-24!49;UBERON:0000955!2.78e-23!50;UBERON:0006238!2.78e-23!50;UBERON:0004121!1.59e-21!102;UBERON:0000924!1.59e-21!102;UBERON:0006601!1.59e-21!102;UBERON:0000033!2.60e-21!63;UBERON:0002791!6.21e-20!29;UBERON:0003528!6.21e-20!29;UBERON:0001893!6.21e-20!29;UBERON:0003080!2.03e-19!40;UBERON:0003056!4.43e-19!49;UBERON:0002780!6.73e-19!39;UBERON:0001890!6.73e-19!39;UBERON:0006240!6.73e-19!39;UBERON:0000956!2.88e-13!21;UBERON:0001869!2.88e-13!21;UBERON:0000203!2.88e-13!21;UBERON:0007811!5.76e-11!86;UBERON:0002619!1.64e-10!17;UBERON:0000153!9.47e-10!94;UBERON:0002420!5.74e-08!8;UBERON:0007245!5.74e-08!8;UBERON:0010009!5.74e-08!8;UBERON:0010011!5.74e-08!8;UBERON:0000454!5.74e-08!8;UBERON:0002021!6.37e-08!10;UBERON:0000411!6.37e-08!10;UBERON:0001950!6.37e-08!10;UBERON:0003076!2.16e-07!12;UBERON:0003057!2.16e-07!12;UBERON:0000025!2.77e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.35e-40,34;UBERON:0000073,2.90e-36,54;UBERON:0001017,8.48e-35,73;UBERON:0001016,1.18e-33,75;UBERON:0001049,1.98e-30,52;UBERON:0005068,1.98e-30,52;UBERON:0006241,1.98e-30,52;UBERON:0007135,1.98e-30,52;UBERON:0003528,4.78e-30,29;UBERON:0002791,4.78e-30,29;UBERON:0001893,4.78e-30,29;UBERON:0002346,2.85e-29,64;UBERON:0003075,2.85e-29,64;UBERON:0007284,2.85e-29,64;UBERON:0004121,7.13e-25,95;UBERON:0000924,7.13e-25,95;UBERON:0006601,7.13e-25,95;UBERON:0010371,9.73e-25,73;UBERON:0002780,3.30e-23,39;UBERON:0001890,3.30e-23,39;UBERON:0006240,3.30e-23,39;UBERON:0002616,7.07e-23,46;UBERON:0003080,1.73e-22,40;UBERON:0000955,2.91e-22,47;UBERON:0006238,2.91e-22,47;UBERON:0000956,2.73e-18,21;UBERON:0001869,2.73e-18,21;UBERON:0000203,2.73e-18,21;UBERON:0010314,4.44e-18,92;UBERON:0002021,2.30e-17,10;UBERON:0000411,2.30e-17,10;UBERON:0001950,2.30e-17,10;UBERON:0003056,2.44e-17,49;UBERON:0002619,2.27e-14,17;UBERON:0002420,3.04e-13,8;UBERON:0007245,3.04e-13,8;UBERON:0010009,3.04e-13,8;UBERON:0010011,3.04e-13,8;UBERON:0000454,3.04e-13,8;UBERON:0001948,2.35e-11,5;UBERON:0002315,2.35e-11,5;UBERON:0000025,4.33e-10,114;UBERON:0002240,2.15e-09,6;UBERON:0005174,2.15e-09,6;UBERON:0001137,2.15e-09,6;UBERON:0004111,5.55e-09,122;UBERON:0002257,2.04e-08,3;UBERON:0003076,2.83e-08,12;UBERON:0003057,2.83e-08,12;UBERON:0011216,5.44e-08,194;UBERON:0002038,5.91e-08,3;UBERON:0009663,5.91e-08,3;UBERON:0009661,5.91e-08,3;UBERON:0000125,5.91e-08,3;UBERON:0002308,5.91e-08,3;UBERON:0000369,3.66e-07,5;UBERON:0002435,3.66e-07,5;UBERON:0000204,3.66e-07,5;UBERON:0010082,3.66e-07,5;UBERON:0004684,4.47e-07,3;UBERON:0002275,4.47e-07,3;UBERON:0010313,8.78e-07,3;UBERON:0002342,8.78e-07,3;UBERON:0002005,8.78e-07,3;UBERON:0005428,8.78e-07,3;UBERON:0005062,8.78e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,1.21389876515759,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0,2.17748185847803,0.405017814995072,1.26194976810829,1.14260393761521,1.10434270475807,2.08234358665422,0.670918297127655,3.67687514644008,2.20231761998777,2.55374676170375,1.22885226604995,1.97829431595291,1.28082701043374,4.16730696445408,1.95428099300967,5.06486349028512,6.1119299110724,5.30331453852602,8.11518580554887,3.72798891650601,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0,0,1.46390398505774,2.09446706813455,0,0,0,0,0.449371918214468,1.37250180845588,0.753926112677186,2.25971616249959,1.27857728665165,0.41557608911912,1.94689515681309,0,0,0,0,0.390361328888111,0,0.180062129805349,0.150704817835715,0.204109497453984,0.384341160854549,0.187403449119458,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0.841159794256509,0.617427674275707,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,1.89304931649754,1.56175497718655,1.29254038639679,0.238968797952552,0,0,0.809621403349789,0.292255857911312,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0,0.428674070063185,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0,0,0.509935289981566,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,3.43737308063638,3.26521046453006,3.42541259885321,5.2877572817279,0,2.70192721934532,3.17199686288943,1.03552062350364,0,0,0.170733605754134,0.729320151204882,0,0,0.222246727801615,0.618105171716683,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.192075457214608,0.0574354689556133,0.952587382566147,0.115884325944855,1.35036454324594,0,0.441596760403192,1.02860775715625,0,0.715308569841963,0.436039249896986,0.282328141245992,0.423073039458382,0.548783918618318,0,0.271608227691724,1.12228454331548,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0,0,0|short_description=p@chr17:90828590..90828596,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=904 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:90828590..90828596,- | |||
|id=chr17:90828590..90828596,- | |||
|ontology_enrichment_celltype=CL:0000117!1.43e-19!23;CL:0000337!1.43e-19!23;CL:0000540!6.71e-19!33;CL:0000047!6.71e-19!33;CL:0000031!6.71e-19!33;CL:0000404!6.71e-19!33;CL:0000221!1.82e-15!44;CL:0000133!1.82e-15!44;CL:0002319!2.83e-15!43;CL:0000393!3.07e-15!39;CL:0000211!3.07e-15!39;CL:0000055!2.82e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-34,23;CL:0000337,1.15e-34,23;CL:0000540,1.90e-30,33;CL:0000047,1.90e-30,33;CL:0000031,1.90e-30,33;CL:0000404,1.90e-30,33;CL:0000393,7.08e-25,39;CL:0000211,7.08e-25,39;CL:0002319,4.99e-22,43;CL:0000221,2.13e-21,44;CL:0000133,2.13e-21,44;CL:0002321,2.32e-11,70;CL:0002612,2.04e-08,3;CL:0002614,5.91e-08,3;CL:0000723,1.69e-07,91;CL:0000048,1.69e-07,91;CL:0002613,2.87e-07,3;CL:0002610,4.47e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.82e-29!75;UBERON:0001016!5.82e-29!75;UBERON:0001017!2.43e-28!73;UBERON:0005743!2.43e-28!73;UBERON:0001049!2.72e-26!52;UBERON:0005068!2.72e-26!52;UBERON:0006241!2.72e-26!52;UBERON:0007135!2.72e-26!52;UBERON:0002346!1.05e-24!71;UBERON:0003075!1.05e-24!71;UBERON:0007284!1.05e-24!71;UBERON:0002020!2.06e-24!34;UBERON:0002616!4.14e-24!49;UBERON:0000955!2.78e-23!50;UBERON:0006238!2.78e-23!50;UBERON:0004121!1.59e-21!102;UBERON:0000924!1.59e-21!102;UBERON:0006601!1.59e-21!102;UBERON:0000033!2.60e-21!63;UBERON:0002791!6.21e-20!29;UBERON:0003528!6.21e-20!29;UBERON:0001893!6.21e-20!29;UBERON:0003080!2.03e-19!40;UBERON:0003056!4.43e-19!49;UBERON:0002780!6.73e-19!39;UBERON:0001890!6.73e-19!39;UBERON:0006240!6.73e-19!39;UBERON:0000956!2.88e-13!21;UBERON:0001869!2.88e-13!21;UBERON:0000203!2.88e-13!21;UBERON:0007811!5.76e-11!86;UBERON:0002619!1.64e-10!17;UBERON:0000153!9.47e-10!94;UBERON:0002420!5.74e-08!8;UBERON:0007245!5.74e-08!8;UBERON:0010009!5.74e-08!8;UBERON:0010011!5.74e-08!8;UBERON:0000454!5.74e-08!8;UBERON:0002021!6.37e-08!10;UBERON:0000411!6.37e-08!10;UBERON:0001950!6.37e-08!10;UBERON:0003076!2.16e-07!12;UBERON:0003057!2.16e-07!12;UBERON:0000025!2.77e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.35e-40,34;UBERON:0000073,2.90e-36,54;UBERON:0001017,8.48e-35,73;UBERON:0001016,1.18e-33,75;UBERON:0001049,1.98e-30,52;UBERON:0005068,1.98e-30,52;UBERON:0006241,1.98e-30,52;UBERON:0007135,1.98e-30,52;UBERON:0003528,4.78e-30,29;UBERON:0002791,4.78e-30,29;UBERON:0001893,4.78e-30,29;UBERON:0002346,2.85e-29,64;UBERON:0003075,2.85e-29,64;UBERON:0007284,2.85e-29,64;UBERON:0004121,7.13e-25,95;UBERON:0000924,7.13e-25,95;UBERON:0006601,7.13e-25,95;UBERON:0010371,9.73e-25,73;UBERON:0002780,3.30e-23,39;UBERON:0001890,3.30e-23,39;UBERON:0006240,3.30e-23,39;UBERON:0002616,7.07e-23,46;UBERON:0003080,1.73e-22,40;UBERON:0000955,2.91e-22,47;UBERON:0006238,2.91e-22,47;UBERON:0000956,2.73e-18,21;UBERON:0001869,2.73e-18,21;UBERON:0000203,2.73e-18,21;UBERON:0010314,4.44e-18,92;UBERON:0002021,2.30e-17,10;UBERON:0000411,2.30e-17,10;UBERON:0001950,2.30e-17,10;UBERON:0003056,2.44e-17,49;UBERON:0002619,2.27e-14,17;UBERON:0002420,3.04e-13,8;UBERON:0007245,3.04e-13,8;UBERON:0010009,3.04e-13,8;UBERON:0010011,3.04e-13,8;UBERON:0000454,3.04e-13,8;UBERON:0001948,2.35e-11,5;UBERON:0002315,2.35e-11,5;UBERON:0000025,4.33e-10,114;UBERON:0002240,2.15e-09,6;UBERON:0005174,2.15e-09,6;UBERON:0001137,2.15e-09,6;UBERON:0004111,5.55e-09,122;UBERON:0002257,2.04e-08,3;UBERON:0003076,2.83e-08,12;UBERON:0003057,2.83e-08,12;UBERON:0011216,5.44e-08,194;UBERON:0002038,5.91e-08,3;UBERON:0009663,5.91e-08,3;UBERON:0009661,5.91e-08,3;UBERON:0000125,5.91e-08,3;UBERON:0002308,5.91e-08,3;UBERON:0000369,3.66e-07,5;UBERON:0002435,3.66e-07,5;UBERON:0000204,3.66e-07,5;UBERON:0010082,3.66e-07,5;UBERON:0004684,4.47e-07,3;UBERON:0002275,4.47e-07,3;UBERON:0010313,8.78e-07,3;UBERON:0002342,8.78e-07,3;UBERON:0002005,8.78e-07,3;UBERON:0005428,8.78e-07,3;UBERON:0005062,8.78e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,1.21389876515759,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0,2.17748185847803,0.405017814995072,1.26194976810829,1.14260393761521,1.10434270475807,2.08234358665422,0.670918297127655,3.67687514644008,2.20231761998777,2.55374676170375,1.22885226604995,1.97829431595291,1.28082701043374,4.16730696445408,1.95428099300967,5.06486349028512,6.1119299110724,5.30331453852602,8.11518580554887,3.72798891650601,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0,0,1.46390398505774,2.09446706813455,0,0,0,0,0.449371918214468,1.37250180845588,0.753926112677186,2.25971616249959,1.27857728665165,0.41557608911912,1.94689515681309,0,0,0,0,0.390361328888111,0,0.180062129805349,0.150704817835715,0.204109497453984,0.384341160854549,0.187403449119458,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0.841159794256509,0.617427674275707,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,1.89304931649754,1.56175497718655,1.29254038639679,0.238968797952552,0,0,0.809621403349789,0.292255857911312,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0,0.428674070063185,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0,0,0.509935289981566,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,3.43737308063638,3.26521046453006,3.42541259885321,5.2877572817279,0,2.70192721934532,3.17199686288943,1.03552062350364,0,0,0.170733605754134,0.729320151204882,0,0,0.222246727801615,0.618105171716683,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.192075457214608,0.0574354689556133,0.952587382566147,0.115884325944855,1.35036454324594,0,0.441596760403192,1.02860775715625,0,0.715308569841963,0.436039249896986,0.282328141245992,0.423073039458382,0.548783918618318,0,0.271608227691724,1.12228454331548,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p@chr17:90828590..90828596,- | |||
}} |
Revision as of 15:38, 13 September 2013
Short description: | p@chr17:90828590..90828596, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:90828590..90828596, - |
Coexpression cluster: | MCL_coexpression_mm9:904 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.15e-34 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-34 | 23 |
neuron | 1.90e-30 | 33 |
neuronal stem cell | 1.90e-30 | 33 |
neuroblast | 1.90e-30 | 33 |
electrically signaling cell | 1.90e-30 | 33 |
electrically responsive cell | 7.08e-25 | 39 |
electrically active cell | 7.08e-25 | 39 |
neural cell | 4.99e-22 | 43 |
ectodermal cell | 2.13e-21 | 44 |
neurectodermal cell | 2.13e-21 | 44 |
embryonic cell | 2.32e-11 | 70 |
neuron of the ventral spinal cord | 2.04e-08 | 3 |
neuron of the substantia nigra | 5.91e-08 | 3 |
somatic stem cell | 1.69e-07 | 91 |
multi fate stem cell | 1.69e-07 | 91 |
striatum neuron | 2.87e-07 | 3 |
raphe nuclei neuron | 4.47e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.