FFCP PHASE1:Mm9::chr2:14660846..14660869,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12296|HGNC=|MCL_coexpression_id=1|UniProt=C7TQ54|association_with_transcript=-356bp_to_uc008ikp.2_5end|description=CAGE_peak_7_at_Cacnb2_5end|id=chr2:14660846..14660869,+|ontology_enrichment_celltype=CL:0000117!5.04e-11!23;CL:0000337!5.04e-11!23;CL:0000540!7.15e-07!33;CL:0000047!7.15e-07!33;CL:0000031!7.15e-07!33;CL:0000404!7.15e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.80e-10,23;CL:0000337,3.80e-10,23;CL:0002610,1.14e-09,3;CL:0002614,6.54e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.61e-24!73;UBERON:0005743!2.61e-24!73;UBERON:0000073!3.12e-23!75;UBERON:0001016!3.12e-23!75;UBERON:0001049!9.96e-23!52;UBERON:0005068!9.96e-23!52;UBERON:0006241!9.96e-23!52;UBERON:0007135!9.96e-23!52;UBERON:0000955!2.79e-21!50;UBERON:0006238!2.79e-21!50;UBERON:0000033!1.72e-20!63;UBERON:0002616!2.74e-20!49;UBERON:0002346!7.60e-20!71;UBERON:0003075!7.60e-20!71;UBERON:0007284!7.60e-20!71;UBERON:0004121!1.19e-18!102;UBERON:0000924!1.19e-18!102;UBERON:0006601!1.19e-18!102;UBERON:0002020!4.64e-18!34;UBERON:0003056!1.29e-15!49;UBERON:0003080!3.43e-15!40;UBERON:0002780!2.58e-14!39;UBERON:0001890!2.58e-14!39;UBERON:0006240!2.58e-14!39;UBERON:0002791!1.11e-13!29;UBERON:0003528!1.11e-13!29;UBERON:0001893!1.11e-13!29;UBERON:0002021!2.26e-12!10;UBERON:0000411!2.26e-12!10;UBERON:0001950!2.26e-12!10;UBERON:0007811!3.67e-12!86;UBERON:0000153!4.76e-10!94;UBERON:0002619!1.36e-08!17;UBERON:0003076!1.97e-08!12;UBERON:0003057!1.97e-08!12;UBERON:0002420!4.71e-08!8;UBERON:0007245!4.71e-08!8;UBERON:0010009!4.71e-08!8;UBERON:0010011!4.71e-08!8;UBERON:0000454!4.71e-08!8;UBERON:0002298!1.06e-07!6;UBERON:0000956!1.16e-07!21;UBERON:0001869!1.16e-07!21;UBERON:0000203!1.16e-07!21;UBERON:0002240!3.55e-07!6;UBERON:0005174!3.55e-07!6;UBERON:0001137!3.55e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.95e-39,54;UBERON:0001049,1.33e-34,52;UBERON:0005068,1.33e-34,52;UBERON:0006241,1.33e-34,52;UBERON:0007135,1.33e-34,52;UBERON:0001017,3.17e-32,73;UBERON:0001016,3.23e-31,75;UBERON:0002020,4.85e-29,34;UBERON:0002021,8.72e-28,10;UBERON:0000411,8.72e-28,10;UBERON:0001950,8.72e-28,10;UBERON:0000955,1.07e-27,47;UBERON:0006238,1.07e-27,47;UBERON:0002346,4.13e-27,64;UBERON:0003075,4.13e-27,64;UBERON:0007284,4.13e-27,64;UBERON:0002616,1.00e-25,46;UBERON:0003080,1.66e-24,40;UBERON:0004121,1.86e-23,95;UBERON:0000924,1.86e-23,95;UBERON:0006601,1.86e-23,95;UBERON:0010371,4.19e-23,73;UBERON:0002780,1.25e-22,39;UBERON:0001890,1.25e-22,39;UBERON:0006240,1.25e-22,39;UBERON:0003528,3.02e-22,29;UBERON:0002791,3.02e-22,29;UBERON:0001893,3.02e-22,29;UBERON:0003056,3.34e-19,49;UBERON:0002619,1.01e-18,17;UBERON:0000956,7.44e-18,21;UBERON:0001869,7.44e-18,21;UBERON:0000203,7.44e-18,21;UBERON:0010314,3.28e-17,92;UBERON:0000025,7.86e-13,114;UBERON:0004111,1.25e-11,122;UBERON:0002950,2.83e-11,4;UBERON:0001891,2.83e-11,4;UBERON:0009616,2.83e-11,4;UBERON:0010286,2.83e-11,4;UBERON:0002240,6.99e-11,6;UBERON:0005174,6.99e-11,6;UBERON:0001137,6.99e-11,6;UBERON:0003076,2.75e-10,12;UBERON:0003057,2.75e-10,12;UBERON:0004684,1.14e-09,3;UBERON:0002275,1.14e-09,3;UBERON:0002038,6.54e-09,3;UBERON:0009663,6.54e-09,3;UBERON:0009661,6.54e-09,3;UBERON:0000125,6.54e-09,3;UBERON:0002308,6.54e-09,3;UBERON:0011216,1.71e-08,194;UBERON:0001948,2.79e-08,5;UBERON:0002315,2.79e-08,5;UBERON:0001896,8.62e-07,2;UBERON:0002298,8.62e-07,2;UBERON:0005290,8.62e-07,2;UBERON:0010096,8.62e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,1.42825492201902,1.10434270475807,0,0,0,4.40463523997555,6.89511625660014,4.45458946443106,0.659431438650969,0.274462930807229,0.52091337055676,4.18774498502071,3.93933827022176,3.0559649555362,2.35702868378934,1.70846016958924,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,3.59497534571574,3.66000482254901,0.125654352112864,7.82209440865244,5.8814555185976,3.74018480207208,5.67844420737152,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.205809224758569,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,5.29816946959713,3.98519734413491,0,0,0,0,0,0,0,0,0,0,0,4.17717711348349,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0.661585194164886,0,0,0,0,0,0,6.48988557036784,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,5.0827665835536,4.14292712856459,3.43737308063638,4.81188910562325,2.05524755931193,9.82012066606611,2.70009000092722,7.65546045481175,7.25027854374727,5.69536342927002,0,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.448176066834085,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0,0.282328141245992,0.423073039458382,0.548783918618318,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421|short_description=p7@Cacnb2}} | ||
|EntrezGene=12296 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=C7TQ54 | |||
|association_with_transcript=-356bp_to_uc008ikp.2_5end | |||
|description=CAGE_peak_7_at_Cacnb2_5end | |||
|id=chr2:14660846..14660869,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.04e-11!23;CL:0000337!5.04e-11!23;CL:0000540!7.15e-07!33;CL:0000047!7.15e-07!33;CL:0000031!7.15e-07!33;CL:0000404!7.15e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.80e-10,23;CL:0000337,3.80e-10,23;CL:0002610,1.14e-09,3;CL:0002614,6.54e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.61e-24!73;UBERON:0005743!2.61e-24!73;UBERON:0000073!3.12e-23!75;UBERON:0001016!3.12e-23!75;UBERON:0001049!9.96e-23!52;UBERON:0005068!9.96e-23!52;UBERON:0006241!9.96e-23!52;UBERON:0007135!9.96e-23!52;UBERON:0000955!2.79e-21!50;UBERON:0006238!2.79e-21!50;UBERON:0000033!1.72e-20!63;UBERON:0002616!2.74e-20!49;UBERON:0002346!7.60e-20!71;UBERON:0003075!7.60e-20!71;UBERON:0007284!7.60e-20!71;UBERON:0004121!1.19e-18!102;UBERON:0000924!1.19e-18!102;UBERON:0006601!1.19e-18!102;UBERON:0002020!4.64e-18!34;UBERON:0003056!1.29e-15!49;UBERON:0003080!3.43e-15!40;UBERON:0002780!2.58e-14!39;UBERON:0001890!2.58e-14!39;UBERON:0006240!2.58e-14!39;UBERON:0002791!1.11e-13!29;UBERON:0003528!1.11e-13!29;UBERON:0001893!1.11e-13!29;UBERON:0002021!2.26e-12!10;UBERON:0000411!2.26e-12!10;UBERON:0001950!2.26e-12!10;UBERON:0007811!3.67e-12!86;UBERON:0000153!4.76e-10!94;UBERON:0002619!1.36e-08!17;UBERON:0003076!1.97e-08!12;UBERON:0003057!1.97e-08!12;UBERON:0002420!4.71e-08!8;UBERON:0007245!4.71e-08!8;UBERON:0010009!4.71e-08!8;UBERON:0010011!4.71e-08!8;UBERON:0000454!4.71e-08!8;UBERON:0002298!1.06e-07!6;UBERON:0000956!1.16e-07!21;UBERON:0001869!1.16e-07!21;UBERON:0000203!1.16e-07!21;UBERON:0002240!3.55e-07!6;UBERON:0005174!3.55e-07!6;UBERON:0001137!3.55e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.95e-39,54;UBERON:0001049,1.33e-34,52;UBERON:0005068,1.33e-34,52;UBERON:0006241,1.33e-34,52;UBERON:0007135,1.33e-34,52;UBERON:0001017,3.17e-32,73;UBERON:0001016,3.23e-31,75;UBERON:0002020,4.85e-29,34;UBERON:0002021,8.72e-28,10;UBERON:0000411,8.72e-28,10;UBERON:0001950,8.72e-28,10;UBERON:0000955,1.07e-27,47;UBERON:0006238,1.07e-27,47;UBERON:0002346,4.13e-27,64;UBERON:0003075,4.13e-27,64;UBERON:0007284,4.13e-27,64;UBERON:0002616,1.00e-25,46;UBERON:0003080,1.66e-24,40;UBERON:0004121,1.86e-23,95;UBERON:0000924,1.86e-23,95;UBERON:0006601,1.86e-23,95;UBERON:0010371,4.19e-23,73;UBERON:0002780,1.25e-22,39;UBERON:0001890,1.25e-22,39;UBERON:0006240,1.25e-22,39;UBERON:0003528,3.02e-22,29;UBERON:0002791,3.02e-22,29;UBERON:0001893,3.02e-22,29;UBERON:0003056,3.34e-19,49;UBERON:0002619,1.01e-18,17;UBERON:0000956,7.44e-18,21;UBERON:0001869,7.44e-18,21;UBERON:0000203,7.44e-18,21;UBERON:0010314,3.28e-17,92;UBERON:0000025,7.86e-13,114;UBERON:0004111,1.25e-11,122;UBERON:0002950,2.83e-11,4;UBERON:0001891,2.83e-11,4;UBERON:0009616,2.83e-11,4;UBERON:0010286,2.83e-11,4;UBERON:0002240,6.99e-11,6;UBERON:0005174,6.99e-11,6;UBERON:0001137,6.99e-11,6;UBERON:0003076,2.75e-10,12;UBERON:0003057,2.75e-10,12;UBERON:0004684,1.14e-09,3;UBERON:0002275,1.14e-09,3;UBERON:0002038,6.54e-09,3;UBERON:0009663,6.54e-09,3;UBERON:0009661,6.54e-09,3;UBERON:0000125,6.54e-09,3;UBERON:0002308,6.54e-09,3;UBERON:0011216,1.71e-08,194;UBERON:0001948,2.79e-08,5;UBERON:0002315,2.79e-08,5;UBERON:0001896,8.62e-07,2;UBERON:0002298,8.62e-07,2;UBERON:0005290,8.62e-07,2;UBERON:0010096,8.62e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,1.42825492201902,1.10434270475807,0,0,0,4.40463523997555,6.89511625660014,4.45458946443106,0.659431438650969,0.274462930807229,0.52091337055676,4.18774498502071,3.93933827022176,3.0559649555362,2.35702868378934,1.70846016958924,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,3.59497534571574,3.66000482254901,0.125654352112864,7.82209440865244,5.8814555185976,3.74018480207208,5.67844420737152,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.205809224758569,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,5.29816946959713,3.98519734413491,0,0,0,0,0,0,0,0,0,0,0,4.17717711348349,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0.661585194164886,0,0,0,0,0,0,6.48988557036784,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,5.0827665835536,4.14292712856459,3.43737308063638,4.81188910562325,2.05524755931193,9.82012066606611,2.70009000092722,7.65546045481175,7.25027854374727,5.69536342927002,0,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.448176066834085,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0,0.282328141245992,0.423073039458382,0.548783918618318,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0,0.499621155875892,0,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p7@Cacnb2 | |||
}} |
Revision as of 22:18, 13 September 2013
Short description: | p7@Cacnb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Cacnb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -356bp_to_uc008ikp.2_5end |
EntrezGene: | Cacnb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.80e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.80e-10 | 23 |
raphe nuclei neuron | 1.14e-09 | 3 |
neuron of the substantia nigra | 6.54e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.