FFCP PHASE1:Mm9::chr7:25782591..25782655,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=168|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:25782591..25782655,-|id=chr7:25782591..25782655,-|ontology_enrichment_celltype=CL:0000117!3.41e-16!23;CL:0000337!3.41e-16!23;CL:0000540!2.80e-10!33;CL:0000047!2.80e-10!33;CL:0000031!2.80e-10!33;CL:0000404!2.80e-10!33;CL:0002319!1.22e-07!43;CL:0000393!2.41e-07!39;CL:0000211!2.41e-07!39;CL:0000221!2.91e-07!44;CL:0000133!2.91e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,8.02e-22,23;CL:0000337,8.02e-22,23;CL:0000540,9.08e-14,33;CL:0000047,9.08e-14,33;CL:0000031,9.08e-14,33;CL:0000404,9.08e-14,33;CL:0000393,6.05e-11,39;CL:0000211,6.05e-11,39;CL:0002319,1.64e-09,43;CL:0000221,3.41e-09,44;CL:0000133,3.41e-09,44;CL:0002610,3.35e-07,3;CL:0002614,6.85e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.53e-26!71;UBERON:0003075!7.53e-26!71;UBERON:0007284!7.53e-26!71;UBERON:0001017!1.24e-23!73;UBERON:0005743!1.24e-23!73;UBERON:0001049!1.77e-23!52;UBERON:0005068!1.77e-23!52;UBERON:0006241!1.77e-23!52;UBERON:0007135!1.77e-23!52;UBERON:0000073!3.83e-23!75;UBERON:0001016!3.83e-23!75;UBERON:0000033!1.36e-22!63;UBERON:0000955!2.64e-22!50;UBERON:0006238!2.64e-22!50;UBERON:0004121!3.68e-22!102;UBERON:0000924!3.68e-22!102;UBERON:0006601!3.68e-22!102;UBERON:0002616!2.03e-21!49;UBERON:0002020!4.04e-21!34;UBERON:0003056!4.76e-20!49;UBERON:0002791!3.63e-17!29;UBERON:0003528!3.63e-17!29;UBERON:0001893!3.63e-17!29;UBERON:0003080!4.87e-17!40;UBERON:0002780!2.78e-16!39;UBERON:0001890!2.78e-16!39;UBERON:0006240!2.78e-16!39;UBERON:0007811!5.20e-12!86;UBERON:0000956!1.83e-11!21;UBERON:0001869!1.83e-11!21;UBERON:0000203!1.83e-11!21;UBERON:0000153!1.29e-10!94;UBERON:0002021!1.50e-09!10;UBERON:0000411!1.50e-09!10;UBERON:0001950!1.50e-09!10;UBERON:0002619!1.87e-09!17;UBERON:0003076!4.31e-07!12;UBERON:0003057!4.31e-07!12;UBERON:0002420!4.75e-07!8;UBERON:0007245!4.75e-07!8;UBERON:0010009!4.75e-07!8;UBERON:0010011!4.75e-07!8;UBERON:0000454!4.75e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.02e-40,54;UBERON:0001017,5.35e-37,73;UBERON:0001049,1.77e-36,52;UBERON:0005068,1.77e-36,52;UBERON:0006241,1.77e-36,52;UBERON:0007135,1.77e-36,52;UBERON:0001016,9.68e-36,75;UBERON:0002346,1.46e-33,64;UBERON:0003075,1.46e-33,64;UBERON:0007284,1.46e-33,64;UBERON:0002020,2.11e-33,34;UBERON:0004121,9.93e-31,95;UBERON:0000924,9.93e-31,95;UBERON:0006601,9.93e-31,95;UBERON:0000955,4.88e-29,47;UBERON:0006238,4.88e-29,47;UBERON:0010371,3.04e-28,73;UBERON:0002616,2.01e-27,46;UBERON:0003528,1.36e-25,29;UBERON:0002791,1.36e-25,29;UBERON:0001893,1.36e-25,29;UBERON:0003080,6.32e-23,40;UBERON:0003056,1.78e-22,49;UBERON:0002780,1.56e-21,39;UBERON:0001890,1.56e-21,39;UBERON:0006240,1.56e-21,39;UBERON:0010314,1.93e-20,92;UBERON:0002021,3.63e-18,10;UBERON:0000411,3.63e-18,10;UBERON:0001950,3.63e-18,10;UBERON:0000956,1.40e-14,21;UBERON:0001869,1.40e-14,21;UBERON:0000203,1.40e-14,21;UBERON:0003076,2.71e-14,12;UBERON:0003057,2.71e-14,12;UBERON:0002619,5.85e-14,17;UBERON:0002420,5.58e-13,8;UBERON:0007245,5.58e-13,8;UBERON:0010009,5.58e-13,8;UBERON:0010011,5.58e-13,8;UBERON:0000454,5.58e-13,8;UBERON:0000025,9.13e-12,114;UBERON:0002240,6.97e-11,6;UBERON:0005174,6.97e-11,6;UBERON:0001137,6.97e-11,6;UBERON:0004111,2.00e-10,122;UBERON:0001948,2.97e-09,5;UBERON:0002315,2.97e-09,5;UBERON:0002950,1.91e-08,4;UBERON:0001891,1.91e-08,4;UBERON:0009616,1.91e-08,4;UBERON:0010286,1.91e-08,4;UBERON:0000369,9.38e-08,5;UBERON:0002435,9.38e-08,5;UBERON:0000204,9.38e-08,5;UBERON:0010082,9.38e-08,5;UBERON:0011216,1.40e-07,194;UBERON:0004684,3.35e-07,3;UBERON:0002275,3.35e-07,3;UBERON:0002038,6.85e-07,3;UBERON:0009663,6.85e-07,3;UBERON:0009661,6.85e-07,3;UBERON:0000125,6.85e-07,3;UBERON:0002308,6.85e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.61582251287033,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,3.1739458756322,1.90149421051854,0,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0.384218305321555,0.311068836925433,1.35005938331691,0.630974884054146,4.85606673486466,4.63823935998388,0.367472397644862,0.0958454710182364,0.919218786610021,17.6185409599022,8.17198963745201,8.44835932909339,1.18697658957174,2.01272815925301,2.6045668527838,11.4465029590566,4.50210088025344,9.62628960993904,9.1334861496837,5.83723891276322,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.587943535678524,0.125666591329675,0,0.578397427679647,0.884610551949874,0,0,0,0,2.34224637609238,49.6388695147889,0.510914110417183,0.11981512450592,0,0,5.54225365797844,1.37250180845588,1.88481528169297,3.99795936442236,5.62574006126727,7.2725815595846,4.54275536589721,0,0.124406970610093,0,3.15662783829711,0,0.459804208866946,0.36012425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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=168 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:25782591..25782655,- | |||
|id=chr7:25782591..25782655,- | |||
|ontology_enrichment_celltype=CL:0000117!3.41e-16!23;CL:0000337!3.41e-16!23;CL:0000540!2.80e-10!33;CL:0000047!2.80e-10!33;CL:0000031!2.80e-10!33;CL:0000404!2.80e-10!33;CL:0002319!1.22e-07!43;CL:0000393!2.41e-07!39;CL:0000211!2.41e-07!39;CL:0000221!2.91e-07!44;CL:0000133!2.91e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.02e-22,23;CL:0000337,8.02e-22,23;CL:0000540,9.08e-14,33;CL:0000047,9.08e-14,33;CL:0000031,9.08e-14,33;CL:0000404,9.08e-14,33;CL:0000393,6.05e-11,39;CL:0000211,6.05e-11,39;CL:0002319,1.64e-09,43;CL:0000221,3.41e-09,44;CL:0000133,3.41e-09,44;CL:0002610,3.35e-07,3;CL:0002614,6.85e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.53e-26!71;UBERON:0003075!7.53e-26!71;UBERON:0007284!7.53e-26!71;UBERON:0001017!1.24e-23!73;UBERON:0005743!1.24e-23!73;UBERON:0001049!1.77e-23!52;UBERON:0005068!1.77e-23!52;UBERON:0006241!1.77e-23!52;UBERON:0007135!1.77e-23!52;UBERON:0000073!3.83e-23!75;UBERON:0001016!3.83e-23!75;UBERON:0000033!1.36e-22!63;UBERON:0000955!2.64e-22!50;UBERON:0006238!2.64e-22!50;UBERON:0004121!3.68e-22!102;UBERON:0000924!3.68e-22!102;UBERON:0006601!3.68e-22!102;UBERON:0002616!2.03e-21!49;UBERON:0002020!4.04e-21!34;UBERON:0003056!4.76e-20!49;UBERON:0002791!3.63e-17!29;UBERON:0003528!3.63e-17!29;UBERON:0001893!3.63e-17!29;UBERON:0003080!4.87e-17!40;UBERON:0002780!2.78e-16!39;UBERON:0001890!2.78e-16!39;UBERON:0006240!2.78e-16!39;UBERON:0007811!5.20e-12!86;UBERON:0000956!1.83e-11!21;UBERON:0001869!1.83e-11!21;UBERON:0000203!1.83e-11!21;UBERON:0000153!1.29e-10!94;UBERON:0002021!1.50e-09!10;UBERON:0000411!1.50e-09!10;UBERON:0001950!1.50e-09!10;UBERON:0002619!1.87e-09!17;UBERON:0003076!4.31e-07!12;UBERON:0003057!4.31e-07!12;UBERON:0002420!4.75e-07!8;UBERON:0007245!4.75e-07!8;UBERON:0010009!4.75e-07!8;UBERON:0010011!4.75e-07!8;UBERON:0000454!4.75e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.02e-40,54;UBERON:0001017,5.35e-37,73;UBERON:0001049,1.77e-36,52;UBERON:0005068,1.77e-36,52;UBERON:0006241,1.77e-36,52;UBERON:0007135,1.77e-36,52;UBERON:0001016,9.68e-36,75;UBERON:0002346,1.46e-33,64;UBERON:0003075,1.46e-33,64;UBERON:0007284,1.46e-33,64;UBERON:0002020,2.11e-33,34;UBERON:0004121,9.93e-31,95;UBERON:0000924,9.93e-31,95;UBERON:0006601,9.93e-31,95;UBERON:0000955,4.88e-29,47;UBERON:0006238,4.88e-29,47;UBERON:0010371,3.04e-28,73;UBERON:0002616,2.01e-27,46;UBERON:0003528,1.36e-25,29;UBERON:0002791,1.36e-25,29;UBERON:0001893,1.36e-25,29;UBERON:0003080,6.32e-23,40;UBERON:0003056,1.78e-22,49;UBERON:0002780,1.56e-21,39;UBERON:0001890,1.56e-21,39;UBERON:0006240,1.56e-21,39;UBERON:0010314,1.93e-20,92;UBERON:0002021,3.63e-18,10;UBERON:0000411,3.63e-18,10;UBERON:0001950,3.63e-18,10;UBERON:0000956,1.40e-14,21;UBERON:0001869,1.40e-14,21;UBERON:0000203,1.40e-14,21;UBERON:0003076,2.71e-14,12;UBERON:0003057,2.71e-14,12;UBERON:0002619,5.85e-14,17;UBERON:0002420,5.58e-13,8;UBERON:0007245,5.58e-13,8;UBERON:0010009,5.58e-13,8;UBERON:0010011,5.58e-13,8;UBERON:0000454,5.58e-13,8;UBERON:0000025,9.13e-12,114;UBERON:0002240,6.97e-11,6;UBERON:0005174,6.97e-11,6;UBERON:0001137,6.97e-11,6;UBERON:0004111,2.00e-10,122;UBERON:0001948,2.97e-09,5;UBERON:0002315,2.97e-09,5;UBERON:0002950,1.91e-08,4;UBERON:0001891,1.91e-08,4;UBERON:0009616,1.91e-08,4;UBERON:0010286,1.91e-08,4;UBERON:0000369,9.38e-08,5;UBERON:0002435,9.38e-08,5;UBERON:0000204,9.38e-08,5;UBERON:0010082,9.38e-08,5;UBERON:0011216,1.40e-07,194;UBERON:0004684,3.35e-07,3;UBERON:0002275,3.35e-07,3;UBERON:0002038,6.85e-07,3;UBERON:0009663,6.85e-07,3;UBERON:0009661,6.85e-07,3;UBERON:0000125,6.85e-07,3;UBERON:0002308,6.85e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.61582251287033,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,3.1739458756322,1.90149421051854,0,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0.384218305321555,0.311068836925433,1.35005938331691,0.630974884054146,4.85606673486466,4.63823935998388,0.367472397644862,0.0958454710182364,0.919218786610021,17.6185409599022,8.17198963745201,8.44835932909339,1.18697658957174,2.01272815925301,2.6045668527838,11.4465029590566,4.50210088025344,9.62628960993904,9.1334861496837,5.83723891276322,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.587943535678524,0.125666591329675,0,0.578397427679647,0.884610551949874,0,0,0,0,2.34224637609238,49.6388695147889,0.510914110417183,0.11981512450592,0,0,5.54225365797844,1.37250180845588,1.88481528169297,3.99795936442236,5.62574006126727,7.2725815595846,4.54275536589721,0,0.124406970610093,0,3.15662783829711,0,0.459804208866946,0.360124259610698,0.150704817835715,0.748401490664606,0.2562274405697,1.21812241927647,2.06962696591213,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57043814830858,1.13195073617213,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,6.42202359951168,7.501547941901,0,0,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,7.71171159412337,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.356737635204141,0.329098041204242,0.304464949114599,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0,6.30446026835733,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,7.36520378411483,6.87474616127276,6.70227411140382,3.42541259885321,5.2877572817279,9.45031500324528,9.45674526770863,6.79713613476307,6.21312374102184,0.103787347584177,0,0,0.486213434136588,0.209613162627982,0,0.222246727801615,0.824140228955577,1.28367683836726,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.459483751644906,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.147198920134397,1.37147700954166,0.177475806159338,0,0.436039249896986,0.282328141245992,0.423073039458382,0.365855945745545,0,0.407412341537585,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,2.24829520144151,0,0.644613162144895,2.10417165275728,0,0.927471342481686 | |||
|short_description=p@chr7:25782591..25782655,- | |||
}} |
Revision as of 12:51, 14 September 2013
Short description: | p@chr7:25782591..25782655, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25782591..25782655, - |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.02e-22 | 23 |
neuroblast (sensu Vertebrata) | 8.02e-22 | 23 |
neuron | 9.08e-14 | 33 |
neuronal stem cell | 9.08e-14 | 33 |
neuroblast | 9.08e-14 | 33 |
electrically signaling cell | 9.08e-14 | 33 |
electrically responsive cell | 6.05e-11 | 39 |
electrically active cell | 6.05e-11 | 39 |
neural cell | 1.64e-09 | 43 |
ectodermal cell | 3.41e-09 | 44 |
neurectodermal cell | 3.41e-09 | 44 |
raphe nuclei neuron | 3.35e-07 | 3 |
neuron of the substantia nigra | 6.85e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.