FFCP PHASE1:Mm9::chr7:71646947..71646958,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11784|HGNC=|MCL_coexpression_id=2|UniProt=E9Q0G5|association_with_transcript=-65bp_to_ENSMUST00000137732_5end|description=CAGE_peak_7_at_Apba2_5end|id=chr7:71646947..71646958,+|ontology_enrichment_celltype=CL:0000540!6.19e-19!33;CL:0000047!6.19e-19!33;CL:0000031!6.19e-19!33;CL:0000404!6.19e-19!33;CL:0000117!4.92e-16!23;CL:0000337!4.92e-16!23;CL:0002319!2.36e-14!43;CL:0000393!4.50e-14!39;CL:0000211!4.50e-14!39;CL:0000221!9.90e-14!44;CL:0000133!9.90e-14!44;CL:0000055!1.39e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.66e-15,23;CL:0000337,1.66e-15,23;CL:0000540,7.87e-13,33;CL:0000047,7.87e-13,33;CL:0000031,7.87e-13,33;CL:0000404,7.87e-13,33;CL:0000393,2.97e-10,39;CL:0000211,2.97e-10,39;CL:0002319,6.06e-09,43;CL:0000221,1.18e-08,44;CL:0000133,1.18e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.91e-35!75;UBERON:0001016!9.91e-35!75;UBERON:0001017!3.09e-34!73;UBERON:0005743!3.09e-34!73;UBERON:0004121!6.67e-29!102;UBERON:0000924!6.67e-29!102;UBERON:0006601!6.67e-29!102;UBERON:0002346!1.06e-28!71;UBERON:0003075!1.06e-28!71;UBERON:0007284!1.06e-28!71;UBERON:0001049!1.13e-26!52;UBERON:0005068!1.13e-26!52;UBERON:0006241!1.13e-26!52;UBERON:0007135!1.13e-26!52;UBERON:0000955!4.31e-25!50;UBERON:0006238!4.31e-25!50;UBERON:0000033!7.89e-25!63;UBERON:0002616!2.86e-24!49;UBERON:0002020!3.63e-23!34;UBERON:0003056!3.21e-22!49;UBERON:0003080!1.64e-20!40;UBERON:0002780!7.33e-20!39;UBERON:0001890!7.33e-20!39;UBERON:0006240!7.33e-20!39;UBERON:0002791!2.14e-19!29;UBERON:0003528!2.14e-19!29;UBERON:0001893!2.14e-19!29;UBERON:0007811!3.09e-17!86;UBERON:0000153!6.92e-16!94;UBERON:0000956!7.05e-14!21;UBERON:0001869!7.05e-14!21;UBERON:0000203!7.05e-14!21;UBERON:0002619!1.82e-11!17;UBERON:0002021!1.46e-10!10;UBERON:0000411!1.46e-10!10;UBERON:0001950!1.46e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.87e-41,54;UBERON:0001017,2.20e-40,73;UBERON:0001016,4.54e-39,75;UBERON:0001049,1.04e-37,52;UBERON:0005068,1.04e-37,52;UBERON:0006241,1.04e-37,52;UBERON:0007135,1.04e-37,52;UBERON:0002020,4.74e-34,34;UBERON:0002346,5.04e-33,64;UBERON:0003075,5.04e-33,64;UBERON:0007284,5.04e-33,64;UBERON:0004121,2.63e-32,95;UBERON:0000924,2.63e-32,95;UBERON:0006601,2.63e-32,95;UBERON:0000955,7.56e-30,47;UBERON:0006238,7.56e-30,47;UBERON:0002616,2.88e-28,46;UBERON:0010371,6.33e-28,73;UBERON:0003528,5.22e-26,29;UBERON:0002791,5.22e-26,29;UBERON:0001893,5.22e-26,29;UBERON:0003080,1.34e-23,40;UBERON:0002021,2.16e-22,10;UBERON:0000411,2.16e-22,10;UBERON:0001950,2.16e-22,10;UBERON:0002780,2.50e-22,39;UBERON:0001890,2.50e-22,39;UBERON:0006240,2.50e-22,39;UBERON:0003056,1.39e-21,49;UBERON:0002619,1.23e-20,17;UBERON:0010314,1.95e-20,92;UBERON:0000956,7.86e-19,21;UBERON:0001869,7.86e-19,21;UBERON:0000203,7.86e-19,21;UBERON:0003076,7.67e-15,12;UBERON:0003057,7.67e-15,12;UBERON:0000025,7.89e-13,114;UBERON:0004111,1.82e-11,122;UBERON:0002240,2.59e-11,6;UBERON:0005174,2.59e-11,6;UBERON:0001137,2.59e-11,6;UBERON:0011216,1.54e-09,194;UBERON:0001948,1.67e-09,5;UBERON:0002315,1.67e-09,5;UBERON:0002420,3.17e-08,8;UBERON:0007245,3.17e-08,8;UBERON:0010009,3.17e-08,8;UBERON:0010011,3.17e-08,8;UBERON:0000454,3.17e-08,8;UBERON:0002950,1.27e-07,4;UBERON:0001891,1.27e-07,4;UBERON:0009616,1.27e-07,4;UBERON:0010286,1.27e-07,4;UBERON:0000483,6.44e-07,174;UBERON:0000119,9.52e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,0.528990979272033,1.90149421051854,0,0,0,0,0.7104801149461,0,0.768436610643109,0.518448061542388,0.810035629990144,0.630974884054146,1.99955689082663,2.65042249141936,0.489963196859816,0.862609239164127,2.75765635983006,2.20231761998777,1.65993539510744,2.30409799884365,1.97829431595291,0.914876436024097,0.52091337055676,1.67509799400829,1.12552522006336,2.90316670775939,1.76777151284201,2.27794689278565,1.1183966749518,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,2.63502717310392,3.56059401582874,0.255457055208591,0,0,0,1.04853447583376,4.57500602818627,1.13088916901578,5.9100268865374,6.39288643325826,3.1168206683934,3.56930778749067,0,0,0,0,0,0.459804208866946,1.0803727788321,0.150704817835715,1.42876648217788,0.512454881139399,0.937017245597288,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0,0,5.25724871410318,2.77842453424068,0,0,0,0,0,0,0.444756087689741,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,2.0871576698413,2.22702204525186,0,0,0.94652465824877,0.390438744296638,0.430846795465598,1.43381278771531,0.222798674082394,1.69845918473299,0.404810701674894,0.876767573733936,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0.709360934569094,0.356737635204141,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0,0,0,6.21227026878773,5.06357760157895,8.02053718815155,9.10821866421544,6.16574267793578,7.55393897389701,5.40018000185445,10.8077088773813,4.53142408984205,10.8729665467882,0.415149390336707,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.512201219238954,0.229741875822453,0,0.231768651889711,0,0.412085900803307,0.735994600671987,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,0,0.593175090620871,0.394017929502254,0.818462086339379,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0.214871054048298,0,0.220591419119515,0|short_description=p7@Apba2}} | ||
|EntrezGene=11784 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=E9Q0G5 | |||
|association_with_transcript=-65bp_to_ENSMUST00000137732_5end | |||
|description=CAGE_peak_7_at_Apba2_5end | |||
|id=chr7:71646947..71646958,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.19e-19!33;CL:0000047!6.19e-19!33;CL:0000031!6.19e-19!33;CL:0000404!6.19e-19!33;CL:0000117!4.92e-16!23;CL:0000337!4.92e-16!23;CL:0002319!2.36e-14!43;CL:0000393!4.50e-14!39;CL:0000211!4.50e-14!39;CL:0000221!9.90e-14!44;CL:0000133!9.90e-14!44;CL:0000055!1.39e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.66e-15,23;CL:0000337,1.66e-15,23;CL:0000540,7.87e-13,33;CL:0000047,7.87e-13,33;CL:0000031,7.87e-13,33;CL:0000404,7.87e-13,33;CL:0000393,2.97e-10,39;CL:0000211,2.97e-10,39;CL:0002319,6.06e-09,43;CL:0000221,1.18e-08,44;CL:0000133,1.18e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.91e-35!75;UBERON:0001016!9.91e-35!75;UBERON:0001017!3.09e-34!73;UBERON:0005743!3.09e-34!73;UBERON:0004121!6.67e-29!102;UBERON:0000924!6.67e-29!102;UBERON:0006601!6.67e-29!102;UBERON:0002346!1.06e-28!71;UBERON:0003075!1.06e-28!71;UBERON:0007284!1.06e-28!71;UBERON:0001049!1.13e-26!52;UBERON:0005068!1.13e-26!52;UBERON:0006241!1.13e-26!52;UBERON:0007135!1.13e-26!52;UBERON:0000955!4.31e-25!50;UBERON:0006238!4.31e-25!50;UBERON:0000033!7.89e-25!63;UBERON:0002616!2.86e-24!49;UBERON:0002020!3.63e-23!34;UBERON:0003056!3.21e-22!49;UBERON:0003080!1.64e-20!40;UBERON:0002780!7.33e-20!39;UBERON:0001890!7.33e-20!39;UBERON:0006240!7.33e-20!39;UBERON:0002791!2.14e-19!29;UBERON:0003528!2.14e-19!29;UBERON:0001893!2.14e-19!29;UBERON:0007811!3.09e-17!86;UBERON:0000153!6.92e-16!94;UBERON:0000956!7.05e-14!21;UBERON:0001869!7.05e-14!21;UBERON:0000203!7.05e-14!21;UBERON:0002619!1.82e-11!17;UBERON:0002021!1.46e-10!10;UBERON:0000411!1.46e-10!10;UBERON:0001950!1.46e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.87e-41,54;UBERON:0001017,2.20e-40,73;UBERON:0001016,4.54e-39,75;UBERON:0001049,1.04e-37,52;UBERON:0005068,1.04e-37,52;UBERON:0006241,1.04e-37,52;UBERON:0007135,1.04e-37,52;UBERON:0002020,4.74e-34,34;UBERON:0002346,5.04e-33,64;UBERON:0003075,5.04e-33,64;UBERON:0007284,5.04e-33,64;UBERON:0004121,2.63e-32,95;UBERON:0000924,2.63e-32,95;UBERON:0006601,2.63e-32,95;UBERON:0000955,7.56e-30,47;UBERON:0006238,7.56e-30,47;UBERON:0002616,2.88e-28,46;UBERON:0010371,6.33e-28,73;UBERON:0003528,5.22e-26,29;UBERON:0002791,5.22e-26,29;UBERON:0001893,5.22e-26,29;UBERON:0003080,1.34e-23,40;UBERON:0002021,2.16e-22,10;UBERON:0000411,2.16e-22,10;UBERON:0001950,2.16e-22,10;UBERON:0002780,2.50e-22,39;UBERON:0001890,2.50e-22,39;UBERON:0006240,2.50e-22,39;UBERON:0003056,1.39e-21,49;UBERON:0002619,1.23e-20,17;UBERON:0010314,1.95e-20,92;UBERON:0000956,7.86e-19,21;UBERON:0001869,7.86e-19,21;UBERON:0000203,7.86e-19,21;UBERON:0003076,7.67e-15,12;UBERON:0003057,7.67e-15,12;UBERON:0000025,7.89e-13,114;UBERON:0004111,1.82e-11,122;UBERON:0002240,2.59e-11,6;UBERON:0005174,2.59e-11,6;UBERON:0001137,2.59e-11,6;UBERON:0011216,1.54e-09,194;UBERON:0001948,1.67e-09,5;UBERON:0002315,1.67e-09,5;UBERON:0002420,3.17e-08,8;UBERON:0007245,3.17e-08,8;UBERON:0010009,3.17e-08,8;UBERON:0010011,3.17e-08,8;UBERON:0000454,3.17e-08,8;UBERON:0002950,1.27e-07,4;UBERON:0001891,1.27e-07,4;UBERON:0009616,1.27e-07,4;UBERON:0010286,1.27e-07,4;UBERON:0000483,6.44e-07,174;UBERON:0000119,9.52e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,0.528990979272033,1.90149421051854,0,0,0,0,0.7104801149461,0,0.768436610643109,0.518448061542388,0.810035629990144,0.630974884054146,1.99955689082663,2.65042249141936,0.489963196859816,0.862609239164127,2.75765635983006,2.20231761998777,1.65993539510744,2.30409799884365,1.97829431595291,0.914876436024097,0.52091337055676,1.67509799400829,1.12552522006336,2.90316670775939,1.76777151284201,2.27794689278565,1.1183966749518,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,2.63502717310392,3.56059401582874,0.255457055208591,0,0,0,1.04853447583376,4.57500602818627,1.13088916901578,5.9100268865374,6.39288643325826,3.1168206683934,3.56930778749067,0,0,0,0,0,0.459804208866946,1.0803727788321,0.150704817835715,1.42876648217788,0.512454881139399,0.937017245597288,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0,0,5.25724871410318,2.77842453424068,0,0,0,0,0,0,0.444756087689741,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,2.0871576698413,2.22702204525186,0,0,0.94652465824877,0.390438744296638,0.430846795465598,1.43381278771531,0.222798674082394,1.69845918473299,0.404810701674894,0.876767573733936,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0.709360934569094,0.356737635204141,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0,0,0,6.21227026878773,5.06357760157895,8.02053718815155,9.10821866421544,6.16574267793578,7.55393897389701,5.40018000185445,10.8077088773813,4.53142408984205,10.8729665467882,0.415149390336707,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.512201219238954,0.229741875822453,0,0.231768651889711,0,0.412085900803307,0.735994600671987,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,0,0.593175090620871,0.394017929502254,0.818462086339379,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p7@Apba2 | |||
}} |
Revision as of 14:04, 14 September 2013
Short description: | p7@Apba2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Apba2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -65bp_to_ENSMUST00000137732_5end |
EntrezGene: | Apba2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.66e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.66e-15 | 23 |
neuron | 7.87e-13 | 33 |
neuronal stem cell | 7.87e-13 | 33 |
neuroblast | 7.87e-13 | 33 |
electrically signaling cell | 7.87e-13 | 33 |
electrically responsive cell | 2.97e-10 | 39 |
electrically active cell | 2.97e-10 | 39 |
neural cell | 6.06e-09 | 43 |
ectodermal cell | 1.18e-08 | 44 |
neurectodermal cell | 1.18e-08 | 44 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.