FFCP PHASE1:Mm9::chr9:43854987..43854999,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=848|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:43854987..43854999,+|id=chr9:43854987..43854999,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,3.54e-07,3;CL:0002610,4.92e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!1.61e-19!86;UBERON:0000153!3.08e-17!94;UBERON:0002370!5.52e-13!23;UBERON:0000974!5.52e-13!23;UBERON:0004807!5.52e-13!23;UBERON:0005058!5.52e-13!23;UBERON:0003351!5.52e-13!23;UBERON:0009113!5.52e-13!23;UBERON:0003295!5.52e-13!23;UBERON:0009722!5.52e-13!23;UBERON:0005562!5.52e-13!23;UBERON:0007690!5.52e-13!23;UBERON:0006562!3.98e-12!24;UBERON:0003408!3.98e-12!24;UBERON:0001557!3.98e-12!24;UBERON:0001042!3.98e-12!24;UBERON:0008814!3.98e-12!24;UBERON:0009145!3.98e-12!24;UBERON:0002616!7.48e-12!49;UBERON:0000064!1.19e-11!99;UBERON:0001049!1.23e-11!52;UBERON:0005068!1.23e-11!52;UBERON:0006241!1.23e-11!52;UBERON:0007135!1.23e-11!52;UBERON:0000955!2.18e-11!50;UBERON:0006238!2.18e-11!50;UBERON:0000063!4.23e-11!35;UBERON:0000072!5.85e-10!27;UBERON:0002020!4.83e-09!34;UBERON:0000475!7.00e-09!200;UBERON:0001017!8.01e-09!73;UBERON:0005743!8.01e-09!73;UBERON:0004177!8.74e-09!29;UBERON:0000073!9.86e-09!75;UBERON:0001016!9.86e-09!75;UBERON:0000477!1.09e-08!154;UBERON:0000033!1.54e-08!63;UBERON:0002021!4.45e-08!10;UBERON:0000411!4.45e-08!10;UBERON:0001950!4.45e-08!10;UBERON:0002346!4.46e-08!71;UBERON:0003075!4.46e-08!71;UBERON:0007284!4.46e-08!71;UBERON:0002791!9.37e-08!29;UBERON:0003528!9.37e-08!29;UBERON:0001893!9.37e-08!29;UBERON:0003080!1.22e-07!40;UBERON:0002619!1.58e-07!17;UBERON:0000483!1.99e-07!181;UBERON:0004121!2.29e-07!102;UBERON:0000924!2.29e-07!102;UBERON:0006601!2.29e-07!102;UBERON:0000119!4.02e-07!183;UBERON:0002780!4.64e-07!39;UBERON:0001890!4.64e-07!39;UBERON:0006240!4.64e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.06e-17,23;UBERON:0000974,5.06e-17,23;UBERON:0004807,5.06e-17,23;UBERON:0005058,5.06e-17,23;UBERON:0003351,5.06e-17,23;UBERON:0009113,5.06e-17,23;UBERON:0003295,5.06e-17,23;UBERON:0009722,5.06e-17,23;UBERON:0005562,5.06e-17,23;UBERON:0007690,5.06e-17,23;UBERON:0006562,3.73e-16,24;UBERON:0003408,3.73e-16,24;UBERON:0001557,3.73e-16,24;UBERON:0001042,3.73e-16,24;UBERON:0008814,3.73e-16,24;UBERON:0009145,3.73e-16,24;UBERON:0002021,6.75e-16,10;UBERON:0000411,6.75e-16,10;UBERON:0001950,6.75e-16,10;UBERON:0000073,1.00e-14,54;UBERON:0000072,6.09e-14,27;UBERON:0003528,7.23e-13,29;UBERON:0002791,7.23e-13,29;UBERON:0001893,7.23e-13,29;UBERON:0004177,1.01e-12,29;UBERON:0005057,1.01e-12,29;UBERON:0002619,1.32e-12,17;UBERON:0002020,6.86e-12,34;UBERON:0002616,9.73e-12,46;UBERON:0000955,2.18e-11,47;UBERON:0006238,2.18e-11,47;UBERON:0001049,5.26e-11,52;UBERON:0005068,5.26e-11,52;UBERON:0006241,5.26e-11,52;UBERON:0007135,5.26e-11,52;UBERON:0003080,5.97e-11,40;UBERON:0001017,1.78e-10,73;UBERON:0001016,4.86e-10,75;UBERON:0000077,6.45e-10,35;UBERON:0002780,7.03e-10,39;UBERON:0001890,7.03e-10,39;UBERON:0006240,7.03e-10,39;UBERON:0000956,9.80e-10,21;UBERON:0001869,9.80e-10,21;UBERON:0000203,9.80e-10,21;UBERON:0007811,1.53e-09,36;UBERON:0002950,7.42e-09,4;UBERON:0001891,7.42e-09,4;UBERON:0009616,7.42e-09,4;UBERON:0010286,7.42e-09,4;UBERON:0000483,1.44e-08,174;UBERON:0002193,2.03e-08,48;UBERON:0002405,2.03e-08,48;UBERON:0000119,2.28e-08,176;UBERON:0003056,3.46e-08,49;UBERON:0002390,4.74e-08,45;UBERON:0003061,4.74e-08,45;UBERON:0002346,4.91e-08,64;UBERON:0003075,4.91e-08,64;UBERON:0007284,4.91e-08,64;UBERON:0000065,5.99e-08,41;UBERON:0011216,1.05e-07,194;UBERON:0001004,1.12e-07,42;UBERON:0000153,2.03e-07,43;UBERON:0002038,3.54e-07,3;UBERON:0009663,3.54e-07,3;UBERON:0009661,3.54e-07,3;UBERON:0000125,3.54e-07,3;UBERON:0002308,3.54e-07,3;UBERON:0004684,4.92e-07,3;UBERON:0002275,4.92e-07,3|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,1.267098499365,0.468129052643987,0.171217968225505,0.398860794976682,1.54080656938085,1.39872643870396,0,0,0,0.157731082679119,0.548457734422955,0,0.425216450755349,0.0992909512008853,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.31790010585369,0.917733760808408,0,0.436050312760893,0.659058548203415,1.1665793944457,0,0,0,0,1.34437519656986,1.02903774414379,0.85960031981627,0.515672092277442,0,0,0,0,0,0,0,0,0.599200221036809,1.92109152660777,0,0,0,1.14260393761521,0.662605622854841,0,0,0,2.20231761998777,2.42605942361857,2.15049146558741,0,0,0,2.79182999001381,3.37657566019008,1.37518422999129,0,0.284743361598206,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,1.67557365450764,0,0,0,0,1.9472783122627,2.28750301409313,0.125654352112864,0.869121600961382,1.02286182932132,1.24672826735736,0.486723789203273,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,1.68231958851302,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.569003702859245,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,3.05046120976805,0.703270119553219,0.327869890753351,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0.968786560175433,0.0603129249281559,0.358117032009409,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,4.10814456816632,0.202725215290164,0.616265742988964,4.15746633528944,1.9692936523423,3.17890167650024,2.04332264183947,2.36303243479324,1.11063094942962,2.057583779685,1.61321896218945,2.72882066071307,2.30908419936791,2.33753804363138,0,0,0,0,0,0.93841237725591,0,0,0,1.12950368523413,2.76195141904306,1.71868654031819,2.57779773515531,0,2.2661816921691,3.37511250115903,2.70192721934532,1.81256963593682,2.5888015587591,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0|short_description=p@chr9:43854987..43854999,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=848 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:43854987..43854999,+ | |||
|id=chr9:43854987..43854999,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,3.54e-07,3;CL:0002610,4.92e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.61e-19!86;UBERON:0000153!3.08e-17!94;UBERON:0002370!5.52e-13!23;UBERON:0000974!5.52e-13!23;UBERON:0004807!5.52e-13!23;UBERON:0005058!5.52e-13!23;UBERON:0003351!5.52e-13!23;UBERON:0009113!5.52e-13!23;UBERON:0003295!5.52e-13!23;UBERON:0009722!5.52e-13!23;UBERON:0005562!5.52e-13!23;UBERON:0007690!5.52e-13!23;UBERON:0006562!3.98e-12!24;UBERON:0003408!3.98e-12!24;UBERON:0001557!3.98e-12!24;UBERON:0001042!3.98e-12!24;UBERON:0008814!3.98e-12!24;UBERON:0009145!3.98e-12!24;UBERON:0002616!7.48e-12!49;UBERON:0000064!1.19e-11!99;UBERON:0001049!1.23e-11!52;UBERON:0005068!1.23e-11!52;UBERON:0006241!1.23e-11!52;UBERON:0007135!1.23e-11!52;UBERON:0000955!2.18e-11!50;UBERON:0006238!2.18e-11!50;UBERON:0000063!4.23e-11!35;UBERON:0000072!5.85e-10!27;UBERON:0002020!4.83e-09!34;UBERON:0000475!7.00e-09!200;UBERON:0001017!8.01e-09!73;UBERON:0005743!8.01e-09!73;UBERON:0004177!8.74e-09!29;UBERON:0000073!9.86e-09!75;UBERON:0001016!9.86e-09!75;UBERON:0000477!1.09e-08!154;UBERON:0000033!1.54e-08!63;UBERON:0002021!4.45e-08!10;UBERON:0000411!4.45e-08!10;UBERON:0001950!4.45e-08!10;UBERON:0002346!4.46e-08!71;UBERON:0003075!4.46e-08!71;UBERON:0007284!4.46e-08!71;UBERON:0002791!9.37e-08!29;UBERON:0003528!9.37e-08!29;UBERON:0001893!9.37e-08!29;UBERON:0003080!1.22e-07!40;UBERON:0002619!1.58e-07!17;UBERON:0000483!1.99e-07!181;UBERON:0004121!2.29e-07!102;UBERON:0000924!2.29e-07!102;UBERON:0006601!2.29e-07!102;UBERON:0000119!4.02e-07!183;UBERON:0002780!4.64e-07!39;UBERON:0001890!4.64e-07!39;UBERON:0006240!4.64e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.06e-17,23;UBERON:0000974,5.06e-17,23;UBERON:0004807,5.06e-17,23;UBERON:0005058,5.06e-17,23;UBERON:0003351,5.06e-17,23;UBERON:0009113,5.06e-17,23;UBERON:0003295,5.06e-17,23;UBERON:0009722,5.06e-17,23;UBERON:0005562,5.06e-17,23;UBERON:0007690,5.06e-17,23;UBERON:0006562,3.73e-16,24;UBERON:0003408,3.73e-16,24;UBERON:0001557,3.73e-16,24;UBERON:0001042,3.73e-16,24;UBERON:0008814,3.73e-16,24;UBERON:0009145,3.73e-16,24;UBERON:0002021,6.75e-16,10;UBERON:0000411,6.75e-16,10;UBERON:0001950,6.75e-16,10;UBERON:0000073,1.00e-14,54;UBERON:0000072,6.09e-14,27;UBERON:0003528,7.23e-13,29;UBERON:0002791,7.23e-13,29;UBERON:0001893,7.23e-13,29;UBERON:0004177,1.01e-12,29;UBERON:0005057,1.01e-12,29;UBERON:0002619,1.32e-12,17;UBERON:0002020,6.86e-12,34;UBERON:0002616,9.73e-12,46;UBERON:0000955,2.18e-11,47;UBERON:0006238,2.18e-11,47;UBERON:0001049,5.26e-11,52;UBERON:0005068,5.26e-11,52;UBERON:0006241,5.26e-11,52;UBERON:0007135,5.26e-11,52;UBERON:0003080,5.97e-11,40;UBERON:0001017,1.78e-10,73;UBERON:0001016,4.86e-10,75;UBERON:0000077,6.45e-10,35;UBERON:0002780,7.03e-10,39;UBERON:0001890,7.03e-10,39;UBERON:0006240,7.03e-10,39;UBERON:0000956,9.80e-10,21;UBERON:0001869,9.80e-10,21;UBERON:0000203,9.80e-10,21;UBERON:0007811,1.53e-09,36;UBERON:0002950,7.42e-09,4;UBERON:0001891,7.42e-09,4;UBERON:0009616,7.42e-09,4;UBERON:0010286,7.42e-09,4;UBERON:0000483,1.44e-08,174;UBERON:0002193,2.03e-08,48;UBERON:0002405,2.03e-08,48;UBERON:0000119,2.28e-08,176;UBERON:0003056,3.46e-08,49;UBERON:0002390,4.74e-08,45;UBERON:0003061,4.74e-08,45;UBERON:0002346,4.91e-08,64;UBERON:0003075,4.91e-08,64;UBERON:0007284,4.91e-08,64;UBERON:0000065,5.99e-08,41;UBERON:0011216,1.05e-07,194;UBERON:0001004,1.12e-07,42;UBERON:0000153,2.03e-07,43;UBERON:0002038,3.54e-07,3;UBERON:0009663,3.54e-07,3;UBERON:0009661,3.54e-07,3;UBERON:0000125,3.54e-07,3;UBERON:0002308,3.54e-07,3;UBERON:0004684,4.92e-07,3;UBERON:0002275,4.92e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,1.267098499365,0.468129052643987,0.171217968225505,0.398860794976682,1.54080656938085,1.39872643870396,0,0,0,0.157731082679119,0.548457734422955,0,0.425216450755349,0.0992909512008853,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.31790010585369,0.917733760808408,0,0.436050312760893,0.659058548203415,1.1665793944457,0,0,0,0,1.34437519656986,1.02903774414379,0.85960031981627,0.515672092277442,0,0,0,0,0,0,0,0,0.599200221036809,1.92109152660777,0,0,0,1.14260393761521,0.662605622854841,0,0,0,2.20231761998777,2.42605942361857,2.15049146558741,0,0,0,2.79182999001381,3.37657566019008,1.37518422999129,0,0.284743361598206,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,1.67557365450764,0,0,0,0,1.9472783122627,2.28750301409313,0.125654352112864,0.869121600961382,1.02286182932132,1.24672826735736,0.486723789203273,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,1.68231958851302,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0.569003702859245,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,3.05046120976805,0.703270119553219,0.327869890753351,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0.968786560175433,0.0603129249281559,0.358117032009409,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,4.10814456816632,0.202725215290164,0.616265742988964,4.15746633528944,1.9692936523423,3.17890167650024,2.04332264183947,2.36303243479324,1.11063094942962,2.057583779685,1.61321896218945,2.72882066071307,2.30908419936791,2.33753804363138,0,0,0,0,0,0.93841237725591,0,0,0,1.12950368523413,2.76195141904306,1.71868654031819,2.57779773515531,0,2.2661816921691,3.37511250115903,2.70192721934532,1.81256963593682,2.5888015587591,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.187283014939765,0.192075457214608,0,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p@chr9:43854987..43854999,+ | |||
}} |
Revision as of 17:54, 14 September 2013
Short description: | p@chr9:43854987..43854999, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:43854987..43854999, + |
Coexpression cluster: | MCL_coexpression_mm9:848 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 3.54e-07 | 3 |
raphe nuclei neuron | 4.92e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.