FFCP PHASE1:Hg19::chr18:56887381..56887399,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2922 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4605 | |||
|TSSclassifier=strong | |||
|UniProt=P07492 | |||
|association_with_transcript=0bp_to_ENST00000256857,NM_001012512,NM_001012513,NM_002091,uc002lhu.2,uc002lhv.2,uc002lhw.2_5end | |||
|description=CAGE_peak_1_at_GRP_5end | |||
|id=chr18:56887381..56887399,+ | |||
|ontology_enrichment_celltype=CL:0002620!3.54e-13!23 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.13e-07;82 | |||
|ontology_enrichment_disease=DOID:171!4.93e-07!10;DOID:17!9.19e-07!5;DOID:450!9.19e-07!5;DOID:66!9.19e-07!5;DOID:423!9.19e-07!5;DOID:0080000!9.19e-07!5;DOID:11722!9.19e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:171;1.50e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.49e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.31e-27!57;UBERON:0005068!1.31e-27!57;UBERON:0006241!1.31e-27!57;UBERON:0007135!1.31e-27!57;UBERON:0007023!1.97e-27!115;UBERON:0001017!6.45e-25!82;UBERON:0002346!6.69e-25!90;UBERON:0005743!1.95e-24!86;UBERON:0000073!2.65e-23!94;UBERON:0001016!2.65e-23!94;UBERON:0002616!1.25e-21!59;UBERON:0003075!3.37e-21!86;UBERON:0007284!3.37e-21!86;UBERON:0002780!6.31e-21!41;UBERON:0001890!6.31e-21!41;UBERON:0006240!6.31e-21!41;UBERON:0000955!7.12e-21!69;UBERON:0006238!7.12e-21!69;UBERON:0003080!3.37e-20!42;UBERON:0003056!2.47e-16!61;UBERON:0002619!4.10e-16!22;UBERON:0002020!6.26e-16!34;UBERON:0003528!6.26e-16!34;UBERON:0001893!7.75e-16!34;UBERON:0002791!5.91e-15!33;UBERON:0001869!1.87e-14!32;UBERON:0001950!5.78e-14!20;UBERON:0000956!1.50e-13!25;UBERON:0000203!1.50e-13!25;UBERON:0000924!7.25e-13!173;UBERON:0006601!7.25e-13!173;UBERON:0000153!7.97e-13!129;UBERON:0007811!7.97e-13!129;UBERON:0000033!2.42e-11!123;UBERON:0004121!1.16e-10!169;UBERON:0003076!1.48e-08!15;UBERON:0003057!1.48e-08!15;UBERON:0000475!1.78e-08!365;UBERON:0002097!3.29e-08!40;UBERON:0002298!1.56e-07!8;UBERON:0001894!7.65e-07!7;UBERON:0006222!7.65e-07!7;UBERON:0003296!9.68e-07!4;UBERON:0010133!9.68e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.95e-20;22!UBERON:0000922;2.25e-19;49!UBERON:0000956;4.70e-17;25!UBERON:0000203;4.70e-17;25!UBERON:0001950;1.80e-16;20!UBERON:0002780;2.79e-15;41!UBERON:0001890;2.79e-15;41!UBERON:0000073;2.27e-14;53!UBERON:0002616;2.27e-14;53!UBERON:0001869;4.96e-13;32!UBERON:0003528;6.51e-13;34!UBERON:0002020;6.51e-13;34!UBERON:0002298;7.33e-13;6!UBERON:0001893;2.26e-12;34!UBERON:0002050;4.56e-12;5!UBERON:0005423;4.56e-12;5!UBERON:0002791;1.11e-11;32!UBERON:0003296;2.88e-10;4!UBERON:0010133;2.88e-10;4!UBERON:0002346;3.68e-10;4!UBERON:0000923;3.68e-10;4!UBERON:0010316;3.68e-10;4!UBERON:0005291;3.68e-10;4!UBERON:0001016;6.74e-09;83!UBERON:0001017;1.64e-08;75!UBERON:0000955;6.88e-08;68!UBERON:0001896;1.48e-07;3!UBERON:0005290;1.48e-07;3!UBERON:0001871;2.47e-07;6!UBERON:0000349;4.06e-07;5!UBERON:0000988;5.76e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.70e-26,56;UBERON:0005068,4.70e-26,56;UBERON:0006241,4.70e-26,56;UBERON:0007135,4.70e-26,56;UBERON:0002346,2.45e-24,86;UBERON:0000073,6.88e-24,53;UBERON:0002616,6.88e-24,53;UBERON:0001016,4.20e-21,89;UBERON:0001017,5.74e-21,81;UBERON:0002619,8.09e-20,22;UBERON:0003075,2.56e-19,82;UBERON:0007284,2.56e-19,82;UBERON:0002780,4.21e-19,41;UBERON:0001890,4.21e-19,41;UBERON:0003080,4.21e-19,41;UBERON:0006240,4.21e-19,41;UBERON:0000955,2.94e-18,68;UBERON:0006238,2.94e-18,68;UBERON:0000956,4.77e-17,25;UBERON:0000203,4.77e-17,25;UBERON:0001950,1.78e-16,20;UBERON:0010371,1.26e-15,104;UBERON:0003528,5.04e-15,34;UBERON:0002020,5.04e-15,34;UBERON:0003056,5.34e-15,61;UBERON:0001893,6.59e-15,34;UBERON:0007023,1.41e-14,114;UBERON:0001869,2.59e-14,32;UBERON:0004121,1.29e-13,171;UBERON:0000924,1.29e-13,171;UBERON:0006601,1.29e-13,171;UBERON:0002298,6.45e-13,6;UBERON:0011216,8.83e-13,223;UBERON:0002791,1.44e-12,32;UBERON:0010314,3.46e-11,132;UBERON:0003296,2.96e-10,4;UBERON:0010133,2.96e-10,4;UBERON:0003076,3.97e-08,15;UBERON:0003057,3.97e-08,15;UBERON:0001896,1.46e-07,3;UBERON:0005290,1.46e-07,3;UBERON:0010096,1.46e-07,3;UBERON:0001871,2.66e-07,6;UBERON:0000349,4.28e-07,5;UBERON:0000988,5.13e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,2.3858578411533,0.486634870302636,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.468642863667593,0,0,0,0.117434498643765,0.161872944368132,0.561803226808994,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,13.0954434052869,24.5590997141353,0.211931901159562,0.900273288253207,3.81294358182224,0.772921620136887,11.353128236227,0.168776332241266,0.194874010322397,1.26216887122057,0.644349290496095,2.42469085228218,39.0510551768276,38.9910620140968,10.3431961309397,0,0,0,1.09776335516636,0.530119073285941,1.85910308591229,2.90250954043037,1.51392510525377,0.36497735907583,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,2.65631221636001,1.04980416073495,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.1253553312841,0,0,41.1694545849587,4.38345574152353,0.276283915531148,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,81.8416571804896,0,0,0,0,0,0,0,127.139611435099,0.173624994933292,0.885741385813839,0,0,0.221158519862449,0.591095237907095,10.3111136662367,0,0,0.461701551022782,0,0,0,0,0,6.41183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76915129006678,10.9985426088053,0,0,0,1.01101699471016,0,0.937057782901357,0,0,0,0,1.20990716048664,7.65181904076225,0.252746318513952,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,5.64951851951331,0,0,1.45614830698521,0,0,0.85381197895741,0,0,0,83.2235739630528,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,12.7236750369489,2.45166131000836,3.69732241469544,0,0.83088067605837,0,0,2.49073182297901,0,0,3.46200281690987,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0.113312091520126,0,1.32506888912221,2.84422503995411,1.45455861916959,0,0,3.73755943986931,102.811615535182,5.79934677486074,0,0,0,0,0,0,0,0,0,2.65820453990096,0.488105059607853,0,12.0415931094915,4.21530395840039,3.78788057942439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,1325.75188984521,0,390.04535383435,7.01497236335553,6.69253126998612,973.159447109391,0,0,635.653174138663,0,0,0.578063025868136,0,0.159633859057151,2.2562800066483,50.6664109405653,1.52145955421279,0.645902582527404,0,0,0,0,0,0,0,0.397832444232549,0,0,3.12605604493237,0,0,0,1.62090203084147,0.781078098613847,0,1.20490039368423,38.8352114402936,0,0,31.8326952290913,0,1164.6157911994,428.089178384563,3.64179362541979,9.1064876540519,0,0,0,5.7774273030307,1.84163765975977,0,0,1.49136876415977,0,0,6.39211104356647,0,0,15.6533631746877,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74279787506451,417.348002816396,0,0.475680363110274,0,0,1405.1621479186,0.231522474323834,1.5299169235277,166.022005615618,0.245148321753905,46.6639563261219,0.981542335574726,1.48523200163543,7.6078030965012,0,0,2.70723129489024,0,0,0,0,8.76403665895821,0,0.143339583151451,0,2.65166811744567,5.23620828408453,0.5290268405154,0,0,0,0.126166424835079,0,0.886889507080059,0,0,0,0,0.378893491091197,0.803892390468535,0,0.20686599172379,1.0661699095049,6.42773964952099,0.129177819672012,0.186224142887574,0,1.2729431655633,2.62752345645685,0.217716747896961,0.342233301085281,0,15.1333853378547,27.2781492367731,0,0,0,0,2.34640942403454,0.244482888365733,4.47585796147312,0,0.201273793591026,0 | |||
|short_description=p1@GRP | |||
}} |
Revision as of 19:35, 20 January 2014
Short description: | p1@GRP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000256857, NM_001012512, NM_001012513, NM_002091, uc002lhu.2, uc002lhv.2, uc002lhw.2_5end |
EntrezGene: | GRP |
HGNC: | 4605 |
UniProt: | P07492 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.49e-11 | 10 |