FFCP PHASE1:Hg19::chr20:30555945..30555984,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=343702 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23062 | |||
|TSSclassifier=strong | |||
|UniProt=Q5GH72 | |||
|association_with_transcript=140bp_to_ENST00000217299,NM_001011718,uc002wxe.2_5end | |||
|coexpression_cluster_id=C3673 | |||
|description=CAGE_peak_1_at_XKR7_5end | |||
|id=chr20:30555945..30555984,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.61e-14!42;CL:0000860!1.55e-12!45;CL:0000047!8.09e-09!8;CL:0002194!2.74e-07!63;CL:0000576!2.74e-07!63;CL:0000040!2.74e-07!63;CL:0000559!2.74e-07!63;CL:0000540!2.97e-07!6;CL:0000031!2.97e-07!6;CL:0000404!2.97e-07!6;CL:0002009!8.44e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.57e-12;6!CL:0000404;4.57e-12;6!CL:0002322;1.06e-10;5!CL:0002319;3.39e-08;25!CL:0002321;7.24e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.23e-15,8;CL:0000540,4.67e-12,6;CL:0000031,4.67e-12,6;CL:0000404,4.67e-12,6;CL:0002322,1.02e-10,5;CL:0002319,3.36e-08,25;CL:0000133,3.99e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.97e-12;82!CL:0000031;4.57e-12;6!UBERON:0006215;8.87e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.79e-43!82;UBERON:0005743!1.54e-41!86;UBERON:0000073!4.24e-41!94;UBERON:0001016!4.24e-41!94;UBERON:0001049!6.94e-40!57;UBERON:0005068!6.94e-40!57;UBERON:0006241!6.94e-40!57;UBERON:0007135!6.94e-40!57;UBERON:0002616!6.23e-33!59;UBERON:0000955!1.16e-32!69;UBERON:0006238!1.16e-32!69;UBERON:0002780!1.04e-30!41;UBERON:0001890!1.04e-30!41;UBERON:0006240!1.04e-30!41;UBERON:0003080!1.27e-29!42;UBERON:0003075!2.73e-27!86;UBERON:0007284!2.73e-27!86;UBERON:0002346!4.10e-27!90;UBERON:0002020!1.45e-25!34;UBERON:0003528!1.45e-25!34;UBERON:0001893!2.12e-25!34;UBERON:0001869!1.23e-24!32;UBERON:0002791!1.88e-24!33;UBERON:0002619!1.13e-22!22;UBERON:0001950!4.37e-21!20;UBERON:0007023!6.21e-21!115;UBERON:0003056!2.01e-20!61;UBERON:0000956!5.94e-19!25;UBERON:0000203!5.94e-19!25;UBERON:0000924!2.99e-18!173;UBERON:0006601!2.99e-18!173;UBERON:0004121!4.99e-18!169;UBERON:0000033!2.36e-14!123;UBERON:0000153!2.56e-13!129;UBERON:0007811!2.56e-13!129;UBERON:0003076!3.60e-11!15;UBERON:0003057!3.60e-11!15;UBERON:0004733!3.03e-09!12;UBERON:0002028!3.03e-09!12;UBERON:0007277!3.03e-09!12;UBERON:0001871!1.08e-08!7;UBERON:0004732!2.89e-08!13;UBERON:0002420!3.54e-08!9;UBERON:0007245!3.54e-08!9;UBERON:0010009!3.54e-08!9;UBERON:0010011!3.54e-08!9;UBERON:0000454!3.54e-08!9;UBERON:0002308!4.77e-08!9;UBERON:0000125!4.77e-08!9;UBERON:0000200!4.13e-07!6;UBERON:0002680!5.81e-07!9;UBERON:0001895!5.81e-07!9;UBERON:0010092!5.81e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.40e-40;22!UBERON:0001869;1.66e-38;32!UBERON:0001950;1.22e-37;20!UBERON:0003528;3.06e-37;34!UBERON:0002020;3.06e-37;34!UBERON:0002791;7.12e-36;32!UBERON:0000956;4.75e-35;25!UBERON:0000203;4.75e-35;25!UBERON:0001893;3.67e-34;34!UBERON:0002780;6.01e-29;41!UBERON:0001890;6.01e-29;41!UBERON:0000073;9.17e-28;53!UBERON:0002616;9.17e-28;53!UBERON:0000955;5.88e-23;68!UBERON:0001017;8.93e-23;75!UBERON:0001016;2.91e-20;83!UBERON:0001871;3.61e-13;6!UBERON:0000200;8.04e-12;6!UBERON:0004733;9.76e-12;12!UBERON:0002028;9.76e-12;12!UBERON:0004732;1.10e-10;13!UBERON:0002021;1.15e-10;5!UBERON:0002298;2.62e-10;6!UBERON:0001872;3.35e-10;5!UBERON:0002420;2.41e-09;9!UBERON:0007245;2.41e-09;9!UBERON:0010009;2.41e-09;9!UBERON:0010011;2.41e-09;9!UBERON:0000454;2.41e-09;9!UBERON:0000349;2.62e-09;5!UBERON:0000125;3.44e-09;9!UBERON:0002308;3.44e-09;9!UBERON:0011216;6.93e-08;132!UBERON:0002680;8.00e-08;9!UBERON:0001895;8.00e-08;9!UBERON:0000369;1.00e-07;4!UBERON:0002435;1.00e-07;4!UBERON:0000204;1.00e-07;4!UBERON:0007023;1.92e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.25e-63,81;UBERON:0001016,1.84e-62,89;UBERON:0001049,2.72e-52,56;UBERON:0005068,2.72e-52,56;UBERON:0006241,2.72e-52,56;UBERON:0007135,2.72e-52,56;UBERON:0000073,1.40e-50,53;UBERON:0002616,1.40e-50,53;UBERON:0000955,1.04e-47,68;UBERON:0006238,1.04e-47,68;UBERON:0001869,7.03e-43,32;UBERON:0003528,1.32e-42,34;UBERON:0002020,1.32e-42,34;UBERON:0002619,1.46e-40,22;UBERON:0001893,6.75e-40,34;UBERON:0002780,1.09e-39,41;UBERON:0001890,1.09e-39,41;UBERON:0003080,1.09e-39,41;UBERON:0006240,1.09e-39,41;UBERON:0002791,1.31e-39,32;UBERON:0001950,1.29e-37,20;UBERON:0003075,1.79e-35,82;UBERON:0007284,1.79e-35,82;UBERON:0000956,4.93e-35,25;UBERON:0000203,4.93e-35,25;UBERON:0002346,3.26e-33,86;UBERON:0004121,1.76e-28,171;UBERON:0000924,1.76e-28,171;UBERON:0006601,1.76e-28,171;UBERON:0010371,2.07e-28,104;UBERON:0003056,2.29e-27,61;UBERON:0011216,1.53e-21,223;UBERON:0007023,2.52e-20,114;UBERON:0010314,2.85e-18,132;UBERON:0003076,2.51e-13,15;UBERON:0003057,2.51e-13,15;UBERON:0001871,3.86e-13,6;UBERON:0000200,8.53e-12,6;UBERON:0004733,9.00e-12,12;UBERON:0002028,9.00e-12,12;UBERON:0007277,9.00e-12,12;UBERON:0004732,1.02e-10,13;UBERON:0002021,1.20e-10,5;UBERON:0002298,2.35e-10,6;UBERON:0001872,3.16e-10,5;UBERON:0000025,1.37e-09,192;UBERON:0002420,2.31e-09,9;UBERON:0007245,2.31e-09,9;UBERON:0010009,2.31e-09,9;UBERON:0010011,2.31e-09,9;UBERON:0000454,2.31e-09,9;UBERON:0000349,2.42e-09,5;UBERON:0000125,3.59e-09,9;UBERON:0002308,3.59e-09,9;UBERON:0002680,8.26e-08,9;UBERON:0001895,8.26e-08,9;UBERON:0010092,8.26e-08,9;UBERON:0000369,1.04e-07,4;UBERON:0002435,1.04e-07,4;UBERON:0000204,1.04e-07,4;UBERON:0010082,1.04e-07,4;UBERON:0000922,5.21e-07,592 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0.492484232307152,0,0.313454721478088,0,0,0,0,0.0821005894499457,0,0,0,0.619264493264304,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.726991193897824,0.377875943688809,0.970336244751265,0.232429036905685,2.05583944010913,1.23882548358041,0.28769239232215,0.512321413058201,0.47296445977717,0,0,1.35426486594342,0.752969358170419,1.09162460023138,1.34834090667051,0.612167784741805,0,0,0,0.398927315243264,0.852449501065388,0,0.56738522469114,0,0.251248665256743,1.0429658368404,0.434377689410233,0,0.368277635987565,0.316462387440884,0.633765858935825,1.91343869968539,0.628975936525128,0.673971786878971,0.300353785683013,0.16072558669708,1.14005097496499,0.59675003159727,1.46131323011707,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.25618263945135,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5632917313483,12.7228577588626,15.8023762302545,13.5795982070135,11.6067591402789,6.93456982244077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0,0,0,0,0,0.34779121492523,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,7.8083912314573,18.5589315066647,26.8026024534958,26.1554888177797,0,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0.206768026122887,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0.764637207142375,1.13929437434833,0.476463550915578,1.23408681925858,0,0,0,6.08897205426597,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0.728163130497081,0,0,0,0.296964680832639,0,7.95318118213038,5.76744607283102,0,0,0.211125408127993,0.19924798825107,0,24.4374765418648,0,0,0,0.359473404589307,0.179021174675609,0,0.0986434056369336,0,0,7.75466196876175,7.6069840492718,71.8609672804299,0,0,0,0,0,0.236387681767936,26.5452397395928,2.33283690706603,9.89662471119766,7.08593108651071,3.49729672013683,57.9810598004916,46.1115513913207,46.992071413614,5.04586413454137,0,0,0.0769502585037971,0.683652335082007,0.922255617552241,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,1.79556088975062,0,0.216388639742091,0,0,0,0,0,0,0.539209063845416,0,0.702793337176017,0,0,0,0,1.20990716048664,45.9109142445735,0.126373159256976,4.35937916302028,0.207376382794494,0,0,0.313932918407225,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,9.49119111278236,0,0,8.29371427022011,2.15106521008283,0.0801588202515337,0,0.599428828746391,0,0,36.3781395467365,0,0,0,0,0,0,0,4.20294202096853,0.684526894459965,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,3.97614844904652,3.40508515278939,4.1795818600905,6.32681408347275,8.3088067605837,0,0,13.1826537947914,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.226624183040251,0,0,4.78346938537737,3.17358244182456,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,11.5188863395708,9.15196986764724,6.50992839673799,1.72022758707021,5.43552352530576,2.6080489235381,8.57761536604631,0,0,0,0,24.3534151019578,28.2596005791109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18943867989,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,177.901070483379,7.76338642056109,0.157265941855896,23.480072211283,0,0.637724760305049,0,0,0,0,16.0114149657094,0,0,7.25790243589993,9.91876034279095,9.25876382531477,11.0762836690008,56.4640599536649,11.1343176467391,7.75083099032885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1306376927592,6.24862478891078,6.82066428453907,8.75138180675914,41.5700854853847,0,0,0.175871244359621,0,2.14280734351315,0.672567444437648,13.3532432932059,19.8066106475629,0,0,0,6.18524570089169,11.31291705281,0,0,0,2.82808061848803,0,2.73947616152849,0.215927591218621,1.43325506366115,3.85973338553944,22.4379328660472,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,41.4072850327927,64.6590019274447,0.713520544665411,0.33883824611688,30.1237015882476,26.1165719370345,0.231522474323834,0.655678681511872,39.5066528943679,0,33.7017462355325,1.57046773691956,0.297046400327086,5.0718687310008,0,0,0.193373663920732,0,0,0,0,0.73033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| |||
|short_description=p1@XKR7 | |||
}} |
Revision as of 10:43, 21 January 2014
Short description: | p1@XKR7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XKR7_5end |
Coexpression cluster: | C3673_neuroblastoma_brain_small_cerebellum_occipital_temporal_duodenum |
Association with transcript: | 140bp_to_ENST00000217299, NM_001011718, uc002wxe.2_5end |
EntrezGene: | XKR7 |
HGNC: | 23062 |
UniProt: | Q5GH72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.23e-15 | 8 |
neuron | 4.67e-12 | 6 |
neuroblast | 4.67e-12 | 6 |
electrically signaling cell | 4.67e-12 | 6 |
embryonic stem cell | 1.02e-10 | 5 |
neural cell | 3.36e-08 | 25 |
neurectodermal cell | 3.99e-07 | 59 |