FFCP PHASE1:Hg19::chr3:14989024..14989041,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7182 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7972 | |||
|TSSclassifier=strong | |||
|UniProt=C9JMI6,P49116 | |||
|association_with_transcript=-49bp_to_ENST00000413118,ENST00000425241_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_NR2C2_5end | |||
|id=chr3:14989024..14989041,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.81e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.03e-29!82;UBERON:0001049!5.93e-29!57;UBERON:0005068!5.93e-29!57;UBERON:0006241!5.93e-29!57;UBERON:0007135!5.93e-29!57;UBERON:0005743!6.31e-28!86;UBERON:0000073!1.47e-27!94;UBERON:0001016!1.47e-27!94;UBERON:0000955!6.46e-26!69;UBERON:0006238!6.46e-26!69;UBERON:0002346!8.98e-25!90;UBERON:0003075!2.20e-24!86;UBERON:0007284!2.20e-24!86;UBERON:0002616!3.66e-24!59;UBERON:0003080!7.38e-23!42;UBERON:0002780!8.55e-23!41;UBERON:0001890!8.55e-23!41;UBERON:0006240!8.55e-23!41;UBERON:0001869!2.06e-20!32;UBERON:0002020!7.68e-20!34;UBERON:0003528!7.68e-20!34;UBERON:0001893!1.37e-19!34;UBERON:0002791!5.30e-19!33;UBERON:0000924!1.28e-18!173;UBERON:0006601!1.28e-18!173;UBERON:0004121!4.54e-18!169;UBERON:0000956!1.52e-16!25;UBERON:0000203!1.52e-16!25;UBERON:0002619!1.81e-16!22;UBERON:0003056!3.79e-16!61;UBERON:0007023!4.37e-16!115;UBERON:0001950!3.73e-15!20;UBERON:0000033!2.35e-14!123;UBERON:0000153!5.62e-14!129;UBERON:0007811!5.62e-14!129;UBERON:0000025!4.37e-13!194;UBERON:0004111!9.30e-11!241;UBERON:0000475!1.52e-10!365;UBERON:0000119!7.93e-10!312;UBERON:0000483!7.95e-10!309;UBERON:0000477!1.90e-09!286;UBERON:0000481!9.42e-09!347;UBERON:0003076!2.68e-07!15;UBERON:0003057!2.68e-07!15;UBERON:0001871!7.25e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.29e-33;22!UBERON:0001869;4.87e-33;32!UBERON:0002791;6.71e-31;32!UBERON:0001950;9.12e-31;20!UBERON:0003528;1.85e-29;34!UBERON:0002020;1.85e-29;34!UBERON:0001893;3.47e-29;34!UBERON:0000956;1.06e-28;25!UBERON:0000203;1.06e-28;25!UBERON:0002780;4.07e-28;41!UBERON:0001890;4.07e-28;41!UBERON:0000073;7.93e-24;53!UBERON:0002616;7.93e-24;53!UBERON:0001017;4.94e-18;75!UBERON:0000955;1.69e-17;68!UBERON:0001016;8.08e-15;83!UBERON:0001871;1.31e-11;6!UBERON:0000200;7.23e-10;6!UBERON:0002420;1.02e-09;9!UBERON:0007245;1.02e-09;9!UBERON:0010009;1.02e-09;9!UBERON:0010011;1.02e-09;9!UBERON:0000454;1.02e-09;9!UBERON:0002021;1.04e-08;5!UBERON:0000349;1.59e-08;5!UBERON:0007023;2.66e-08;114!UBERON:0001872;2.80e-08;5!UBERON:0004733;6.74e-08;12!UBERON:0002028;6.74e-08;12!UBERON:0004732;3.94e-07;13!UBERON:0000125;5.65e-07;9!UBERON:0002308;5.65e-07;9!UBERON:0011216;6.15e-07;132!UBERON:0009663;6.37e-07;7!UBERON:0002680;8.44e-07;9!UBERON:0001895;8.44e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.54e-49,56;UBERON:0005068,1.54e-49,56;UBERON:0006241,1.54e-49,56;UBERON:0007135,1.54e-49,56;UBERON:0000073,2.14e-46,53;UBERON:0002616,2.14e-46,53;UBERON:0001017,7.26e-42,81;UBERON:0002780,7.77e-40,41;UBERON:0001890,7.77e-40,41;UBERON:0003080,7.77e-40,41;UBERON:0006240,7.77e-40,41;UBERON:0000955,1.75e-39,68;UBERON:0006238,1.75e-39,68;UBERON:0001016,1.17e-38,89;UBERON:0001869,6.13e-37,32;UBERON:0003075,2.15e-35,82;UBERON:0007284,2.15e-35,82;UBERON:0002791,2.95e-34,32;UBERON:0001893,3.65e-34,34;UBERON:0003528,4.33e-34,34;UBERON:0002020,4.33e-34,34;UBERON:0002619,1.53e-33,22;UBERON:0002346,6.48e-33,86;UBERON:0001950,1.03e-30,20;UBERON:0010371,2.96e-29,104;UBERON:0000956,1.23e-28,25;UBERON:0000203,1.23e-28,25;UBERON:0003056,1.26e-26,61;UBERON:0007023,2.95e-23,114;UBERON:0010314,4.22e-23,132;UBERON:0004121,8.86e-23,171;UBERON:0000924,8.86e-23,171;UBERON:0006601,8.86e-23,171;UBERON:0011216,1.17e-15,223;UBERON:0000025,1.36e-14,192;UBERON:0004111,6.03e-12,240;UBERON:0001871,1.45e-11,6;UBERON:0003076,8.86e-11,15;UBERON:0003057,8.86e-11,15;UBERON:0002420,6.19e-10,9;UBERON:0007245,6.19e-10,9;UBERON:0010009,6.19e-10,9;UBERON:0010011,6.19e-10,9;UBERON:0000454,6.19e-10,9;UBERON:0000200,8.71e-10,6;UBERON:0000119,1.74e-09,309;UBERON:0000483,2.46e-09,306;UBERON:0002021,1.10e-08,5;UBERON:0000349,1.58e-08,5;UBERON:0001872,2.93e-08,5;UBERON:0004733,5.41e-08,12;UBERON:0002028,5.41e-08,12;UBERON:0007277,5.41e-08,12;UBERON:0004732,3.23e-07,13;UBERON:0000125,3.62e-07,9;UBERON:0002308,3.62e-07,9;UBERON:0009663,3.97e-07,7;UBERON:0001894,5.03e-07,7;UBERON:0006222,5.03e-07,7;UBERON:0002680,9.58e-07,9;UBERON:0001895,9.58e-07,9;UBERON:0010092,9.58e-07,9 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0.697801167972428,0.873765488520689,1.05506791291381,0.123766352960047,0.331397375727916,1.34465029290355,0.602694528023977,0,0.975865597581014,0.246242116153576,1.02000345622126,1.25381888591235,0.572471974262113,0.821246550437305,0.87879847716362,0.916960868975415,0.738905305049512,0.393553906568396,0.393364276848904,0,0,0,0.90361775633475,0.739508020333575,0.232401601740905,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.436194716338694,1.13362783106643,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0.800791974072025,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0,0.32592226663359,0.473447805734733,0,0.222820913770347,0.294605907474837,0,0,0.25618263945135,0.130059347559878,0.328875809207352,0.552700035571697,0,0.14828656316206,0,1.04535523804977,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,1.24930726552346,0.236777252044017,0,0.201606743224732,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0.722878304769133,1.00267582127178,0.144846518960824,0,0.973269740605272,0.472674085820339,0.665188192387692,0.614843499851882,2.5540919722054,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.550236083880135,0.208994966536811,0,0,1.00416183829401,0,0,0.488124115096339,0.367663080345869,0,0.535798369704479,0.22452937262617,1.12611480483322,1.53316637465883,0.949265659568129,0,0,0,0,0,0.506522046658319,0.264818361626438,0,0.709336764396714,0.560677600142307,0,0.49333509683432,0.933633106199299,0.404132016209064,0.490385709340376,0.454072282934794,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.587172493218824,0.485618833104395,0.702254033511242,0,0.368502951935304,0.309977343527296,1.18800285728205,0,0,0.718618141816238,0.336672227908132,0.750711119231785,0.554128230968366,0,0.30648779579902,0.901428353439581,0.226864366320042,0.717558542755448,0,0,0,0.515262646192195,0.515281080091258,0.18611685633159,0.506328996723799,0.292311015483596,0.504867548488229,0,0.484938170456436,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0.573609190778008,0.731842236777572,0.397589304964456,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0,0,0.591534000199219,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0,0,0.329250856225877,0,0.402115889646523,0.277765335475589,0,0,0,0.34779121492523,0.352226082707465,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.264145302039678,0.414656231081544,0,0,0.253991577168676,0.763976851116555,0,1.71072446022705,0.205654985406647,0,0.285826432630578,0.112131084345361,1.30788020649984,0.22001485746285,0,0,1.690605505112,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.599837947092342,0,0,0,0.479249710983165,0,7.13184525203592,0.434343920002738,0.821905290201534,0.179060963239896,0.672510863961164,0.591092280605782,0.646882724578552,0.385029108839245,0.76228387266739,1.30139853857622,3.09315525111078,0.837581326671744,1.27587750330633,0,0,0,0.24538298343828,0,0.271265023699736,0.831883446123229,0.535286966391485,0.630809660135739,0.819989904948992,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,0.391602314925481,1.02943027143257,0.206768026122887,0.215714200818617,0.320182673410333,0.909382714338778,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,0,0.64341568457443,0,0.462629081407967,0.532685175939381,0.164254312027618,0.519254429183621,0.232420756919918,0.362578348774867,0.40101294060657,0.276242966807689,0.459257792658427,0.728364672026868,0.262248829918848,0.451199612907412,0.0770153371044148,0,0,0.316654886678627,0,1.36074964221213,0.647747748306418,0,0.541892875087706,1.00337954770971,0,0,0.223874754722178,0.438519753291869,0,0,0.328014645699706,0.325378394664303,0.309123034943167,1.09883357782012,0.247528499761764,0.574265537996172,1.30012049207304,1.6068392984416,0.676695028044854,0.462145851343933,1.22802939780904,0.551346289938122,0.107420244868274,0.435050081742686,0.426133137080504,0.356128142586949,0,0.576570202095319,0.510450849978337,0.708104465988849,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,1.56989728039846,0,0.274537029736055,0.353437207037059,0,0,0.421258456238981,0,0,0,0,0.707027159768564,1.13008116620243,0.551365343546124,0,0.876901770507525,0,0,0.202910376962704,0.30982349809975,0.845086807596724,1.00387946542836,0.196498082026242,0.35667105148125,0,0.211107635297664,0,0.379473173765715,1.04980416073495,0.192444225451024,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0.106824071127473,5.77487913158015,1.22520107990516,0.371606350251437,0.144269212976445,0.284567373393656,0.637705090915289,0.199579371432817,0,0,0.324621940274555,0,0.228234679033192,0.47003968731907,0,0,0,0.201799707191048,0,0.343505344755765,0.307240764308458,0.223676107892416,0.333698283423817,0,0.278406173895242,2.46174797895425,0.811367035427949,1.33228787199128,0,0.37428108081644,0.146508179271894,0.970884173996107,0.780103689942349,0.568272293612826,0,0.296964680832639,0,9.94147647766298,9.56552031591487,0.445234820091624,1.48323486804084,2.32237948940793,1.79323189425963,0.828851746593443,0.251932747854276,0.306806047506464,0.123084805461069,0,0.808815160325942,0.358042349351218,0,0,0,3.33410970433911,5.81599647657131,2.87581104301739,5.98841394003583,2.08342208868187,0.437299999980979,0.724999575434793,0.227586896570999,1.27126825146383,0.945550727071745,0.689486746482929,0.874813840149763,0.868124974666461,2.65722415744152,2.17073589525734,3.05163472634166,5.30780447669878,5.02430952221031,4.8264787373874,0.10893846351899,0,0.846452843541768,0.683652335082007,0.46112780877612,0.359030577639089,0.325942115766024,0,0.274792780205587,0,0,0.470940769185074,0.332423363800313,0.902382642468723,0.392125068635479,0.167821586975843,0.189753732724185,0.158936578980379,0.210998064528027,0.326465616318295,0.282706142867882,0.216388639742091,0,0.265372693510018,1.22206028986725,0.889563386041866,0.494255755786011,0.522109747527277,0.539209063845416,0.802577647298789,1.63985112007737,0,0.19566461893209,0.485560759068186,0.394584402849391,6.04953580243319,6.1214552326098,0.505492637027904,0.450970258243478,0.311064574191741,4.6525771089503,1.65495977937749,3.7671950208867,2.38944859545918,1.70765727617876,0.277349346026277,0,0.195984794828755,0.783532859223623,0.698906672968121,0.51595809741485,0.580537987734511,1.09633975629278,0.246346371159628,0.290967049465258,0.970817393606503,1.12990370390266,0.959293472527256,1.78843150532691,3.98858014522036,1.17330829640882,0.0801588202515337,0.85381197895741,0.599428828746391,0.864542502924636,0.343609788497747,0.857974989309823,1.1524383839052,0.745515213392595,1.41416420770077,0.815425236441684,0.941425616810999,0.101998217636322,0.577901179803038,2.40168115483916,1.77976992559591,1.27746588066972,0.859530882839914,0.262887354279314,0.558564802544508,0.916641696046735,2.15361907373044,1.39775300349294,0.429226048136571,0,0.53746777989381,0,3.49487848582361,0.393915911536118,0.412079291905832,0.606631894687664,0.393709926058995,0.423366660328922,6.36183751847443,5.17572943223987,0.803765742325096,0.687697182986169,0,0,0,4.79921497598395,0,0.472834243795189,0.891727998294968,0.211200673038813,0.717149357331379,2.30298236783334,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0.653174720218818,1.19730191562487,0.410462603746695,0.851940108927109,1.13312091520126,0.146552233678082,2.65013777824443,2.45637617086946,0.79339561045614,0.513260513652988,0.704815022316672,0.320362237703084,0.78602152549833,0.828478110694391,0,0.592834895693833,0.243585196761792,0.638341257770182,0,0.2506898940227,0,0.327872630709804,0.471162288750703,7.08854543973589,7.32157589411779,5.50840095108599,4.0138643698305,1.88579387612649,0.993542447062135,1.38348634936231,0.499921631848426,0,0,0.235265819698172,4.21501415226193,0.724605143054126,0.298509605773748,0.701139929541673,0,0.378806010550178,0.754703705257725,0,0.457680136793847,0,0.466311601748341,0.147855149989634,0.159296767163702,0.899606224327209,0.155262956876259,0.829412415681711,0,0.521745061811734,0.300515217994437,0.761610424337591,0.406870733204662,0.727394636810238,0.107410557042488,0.928067519756987,1.19428766609585,0.800055529326307,0,0,1.26184898228651,0.770479321629213,1.50109113962448,0.260994291965212,0.453411851024545,0,0,0,0,0.438568099157414,0.353378291891762,0.38582807654183,0.506827321959218,0.76872455576384,1.72715170865599,0,5.3920790099175,0,0.265729680626726,0.490696182767533,2.6208787907713,0.737318726261158,0.845248493434508,0.39997479170986,0.320075189082423,0,2.27006381426734,0.184105950251841,0.979156554036111,0.622077260032973,1.15104934173287,1.29389773676018,0.314531883711793,0.327628914576042,0.509197589862076,0.637724760305049,0.991486114072017,0.558644917973244,0.636008701306837,0.157723490002507,0,0,0.6124909547064,2.50493977876192,5.6678630530234,7.50279137568611,10.4609345762785,10.8390829375339,3.1120763608898,6.13607453401034,0,0.588886311006154,0.11796972334774,0.366857197043358,0.231051332300676,0.762764190934334,0.690359926060101,0.198916222116275,1.27857558193737,1.21023041222112,0.781514011233092,2.09525355585138,1.47394725759087,0.295712172434091,3.17426647706455,4.68646859168308,4.13373593002368,3.55128537085878,7.65764732625507,1.09651553371436,0.496211178389294,0.527613733078862,0.255524855279191,6.42842203053944,2.35398605553177,0.606965604236632,1.82129753081038,0.532214220975833,0.230467975111559,1.02892805662451,1.83518279037446,4.01213918733379,0.709163045303809,1.00108261702862,0.863424021355654,4.39923651764805,0.280272163313789,3.65263488203798,0,0,1.07214816264985,0.790068058663633,0.697448552208751,0.347716544605159,1.60342272946051,0.414432328326074,0.17071847709395,1.38251932362818,0,0.946656005844523,0.426067023795788,1.27016115057279,0.4582137370881,0,0,0.335566295393377,0.294450700845729,0.609589624911347,1.94228651156368,0.205325613712494,2.3196288626764,3.39997695141398,0.935757853848423,2.58636007709779,1.66488127088596,0.79062257427272,1.8689887846723,0.905777061400041,0.385870790539723,1.5299169235277,0.940634592723046,1.47088993052343,1.17838273550813,3.14093547383912,1.18818560130834,1.6906229103336,0.509781344063451,0.657887425858975,0.580120991762195,0,0.71421575442263,1.41157948686277,0.240724100067505,2.19100916473955,0,0.286679166302903,0.315543124386369,4.55542984279128,11.7814686391902,0.5290268405154,0,0.462175628631418,0.432626562123789,0.504665699340316,0.218531143927391,0.506794004045748,1.01988829741982,0,0.643264296743914,0.250707539292375,2.1218035501107,6.69910325390446,4.1458471972939,1.65492793379032,0.213233981900981,2.3806443146374,0.322944549180031,0.31037357147929,1.12131862580613,0.572824424503484,2.62752345645685,0.435433495793923,1.71116650542641,0.202056159043763,0.573777643141411,0.665320713092027,0.162806537221949,1.70763753404345,3.8614456457388,0.628776414746108,0,0.733448665097199,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p3@NR2C2 | |||
}} |
Revision as of 17:34, 21 January 2014
Short description: | p3@NR2C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NR2C2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -49bp_to_ENST00000413118, ENST00000425241_5end |
EntrezGene: | NR2C2 |
HGNC: | 7972 |
UniProt: | C9JMI6P49116 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data