FFCP PHASE1:Hg19::chr5:178986726..178986820,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19760 | |||
|TSSclassifier=strong | |||
|UniProt=Q96T51 | |||
|association_with_transcript=0bp_to_ENST00000503514,NM_001040451,NM_001040452,uc003mkb.1,uc003mkc.1_5end | |||
|description=CAGE_peak_2_at_RUFY1_5end | |||
|id=chr5:178986726..178986820,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.95e-13!254;CL:0000077!1.43e-08!19;CL:0002321!2.90e-08!248;CL:0000220!4.21e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.55e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.02e-12,253;CL:0000077,1.29e-08,19;CL:0002321,3.64e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.11e-20!143;DOID:305!4.25e-18!106;DOID:14566!3.63e-08!239;DOID:0050615!1.54e-07!16;DOID:162!3.31e-07!235;DOID:1324!5.66e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.04e-07;16!DOID:1324;3.86e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.17e-20,143;DOID:305,2.57e-18,106;DOID:14566,2.51e-09,239;DOID:162,2.73e-08,235;DOID:0050615,1.41e-07,16;DOID:1324,5.23e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.23e-25!365;UBERON:0000481!1.17e-19!347;UBERON:0000924!1.45e-16!173;UBERON:0006601!1.45e-16!173;UBERON:0000073!2.60e-16!94;UBERON:0001016!2.60e-16!94;UBERON:0004121!7.60e-16!169;UBERON:0005743!4.48e-14!86;UBERON:0001017!1.95e-13!82;UBERON:0000033!5.11e-13!123;UBERON:0000955!5.35e-13!69;UBERON:0006238!5.35e-13!69;UBERON:0000119!8.53e-13!312;UBERON:0000483!1.30e-12!309;UBERON:0000468!2.68e-12!659;UBERON:0002780!5.51e-12!41;UBERON:0001890!5.51e-12!41;UBERON:0006240!5.51e-12!41;UBERON:0000153!8.78e-12!129;UBERON:0007811!8.78e-12!129;UBERON:0001869!1.47e-11!32;UBERON:0003056!1.92e-11!61;UBERON:0003080!2.39e-11!42;UBERON:0002346!3.89e-11!90;UBERON:0000922!4.56e-11!612;UBERON:0001893!4.67e-11!34;UBERON:0002791!1.10e-10!33;UBERON:0002020!1.75e-10!34;UBERON:0003528!1.75e-10!34;UBERON:0003075!1.78e-10!86;UBERON:0007284!1.78e-10!86;UBERON:0001049!2.52e-10!57;UBERON:0005068!2.52e-10!57;UBERON:0006241!2.52e-10!57;UBERON:0007135!2.52e-10!57;UBERON:0002050!3.63e-10!605;UBERON:0005423!3.63e-10!605;UBERON:0002616!3.73e-10!59;UBERON:0002619!4.31e-10!22;UBERON:0000923!7.73e-10!604;UBERON:0005291!7.73e-10!604;UBERON:0006598!7.73e-10!604;UBERON:0002532!7.73e-10!604;UBERON:0000062!1.28e-09!511;UBERON:0001950!1.40e-09!20;UBERON:0000956!1.72e-09!25;UBERON:0000203!1.72e-09!25;UBERON:0000467!6.74e-09!625;UBERON:0001048!9.71e-09!168;UBERON:0000480!1.25e-08!626;UBERON:0000064!2.03e-08!219;UBERON:0000464!3.72e-08!104;UBERON:0005153!1.27e-07!37;UBERON:0004111!1.57e-07!241;UBERON:0000025!2.47e-07!194;UBERON:0000477!2.73e-07!286;UBERON:0002100!3.18e-07!216;UBERON:0005156!4.74e-07!59;UBERON:0000990!4.74e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.36e-11;32!UBERON:0002619;3.52e-10;22!UBERON:0002791;3.88e-10;32!UBERON:0001893;7.93e-10;34!UBERON:0000956;1.02e-09;25!UBERON:0000203;1.02e-09;25!UBERON:0001950;1.32e-09;20!UBERON:0003528;1.52e-09;34!UBERON:0002020;1.52e-09;34!UBERON:0002780;3.77e-09;41!UBERON:0001890;3.77e-09;41!UBERON:0000955;1.66e-07;68!UBERON:0000073;3.40e-07;53!UBERON:0002616;3.40e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.30e-17,223;UBERON:0004121,4.98e-17,171;UBERON:0000924,4.98e-17,171;UBERON:0006601,4.98e-17,171;UBERON:0001016,3.23e-16,89;UBERON:0001017,5.77e-14,81;UBERON:0000955,1.45e-13,68;UBERON:0006238,1.45e-13,68;UBERON:0000119,1.44e-12,309;UBERON:0000483,2.18e-12,306;UBERON:0010371,2.62e-12,104;UBERON:0003056,4.59e-12,61;UBERON:0002780,4.73e-12,41;UBERON:0001890,4.73e-12,41;UBERON:0003080,4.73e-12,41;UBERON:0006240,4.73e-12,41;UBERON:0010314,6.08e-12,132;UBERON:0001869,1.27e-11,32;UBERON:0000073,2.00e-11,53;UBERON:0002616,2.00e-11,53;UBERON:0002346,2.12e-11,86;UBERON:0001893,4.06e-11,34;UBERON:0001049,6.35e-11,56;UBERON:0005068,6.35e-11,56;UBERON:0006241,6.35e-11,56;UBERON:0007135,6.35e-11,56;UBERON:0002791,7.83e-11,32;UBERON:0003075,1.10e-10,82;UBERON:0007284,1.10e-10,82;UBERON:0000922,1.12e-10,592;UBERON:0003528,1.53e-10,34;UBERON:0002020,1.53e-10,34;UBERON:0002619,3.80e-10,22;UBERON:0001950,1.24e-09,20;UBERON:0000956,1.53e-09,25;UBERON:0000203,1.53e-09,25;UBERON:0005423,1.14e-08,581;UBERON:0002050,9.72e-08,564;UBERON:0005153,1.16e-07,37;UBERON:0004111,1.34e-07,240;UBERON:0000923,2.36e-07,560;UBERON:0010316,2.36e-07,560;UBERON:0005291,2.36e-07,560;UBERON:0006598,2.36e-07,560;UBERON:0010317,2.36e-07,560;UBERON:0002532,2.36e-07,560;UBERON:0000025,3.26e-07,192;UBERON:0005156,3.58e-07,59;UBERON:0000990,3.58e-07,59;UBERON:0001048,8.82e-07,160 | |||
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| |||
|short_description=p2@RUFY1 | |||
}} |
Revision as of 09:24, 22 January 2014
Short description: | p2@RUFY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RUFY1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503514, NM_001040451, NM_001040452, uc003mkb.1, uc003mkc.1_5end |
EntrezGene: | RUFY1 |
HGNC: | 19760 |
UniProt: | Q96T51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.02e-12 | 253 |
mesothelial cell | 1.29e-08 | 19 |
embryonic cell | 3.64e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.17e-20 | 143 |
carcinoma | 2.57e-18 | 106 |
disease of cellular proliferation | 2.51e-09 | 239 |
cancer | 2.73e-08 | 235 |
respiratory system cancer | 1.41e-07 | 16 |
lung cancer | 5.23e-07 | 15 |