FFCP PHASE1:Hg19::chr8:22550530..22550609,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3240 | |||
|TSSclassifier=strong | |||
|UniProt=E5RIM5 | |||
|association_with_transcript=81bp_to_ENST00000519492_5end | |||
|coexpression_cluster_id=C1242 | |||
|description=CAGE_peak_2_at_EGR3_5end | |||
|id=chr8:22550530..22550609,- | |||
|ontology_enrichment_celltype=CL:0002057!7.13e-12!42;CL:0000860!2.16e-10!45;CL:0000766!9.09e-09!76;CL:0000557!7.38e-08!71;CL:0000839!8.85e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-13;33!CL:0002057;1.08e-13;33!CL:0000473;1.66e-09;39!CL:0000234;1.66e-09;39!CL:0000097;5.45e-08;5!CL:0002567;8.00e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.50e-12,72;CL:0000860,1.84e-10,42;CL:0002057,1.84e-10,42;CL:0000557,1.01e-09,67;CL:0000839,7.12e-09,66;CL:0000473,1.21e-08,48;CL:0000234,1.21e-08,48;CL:0000097,5.99e-08,5;CL:0002028,5.99e-08,5;CL:0000763,7.34e-07,108;CL:0000049,7.34e-07,108;CL:0002567,7.37e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.33e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!7.22e-22!32;UBERON:0002780!2.22e-21!41;UBERON:0001890!2.22e-21!41;UBERON:0006240!2.22e-21!41;UBERON:0001893!3.07e-21!34;UBERON:0003080!1.54e-20!42;UBERON:0002791!2.41e-20!33;UBERON:0002619!1.57e-19!22;UBERON:0002020!4.21e-18!34;UBERON:0003528!4.21e-18!34;UBERON:0001950!8.56e-18!20;UBERON:0000956!3.80e-16!25;UBERON:0000203!3.80e-16!25;UBERON:0001049!8.20e-15!57;UBERON:0005068!8.20e-15!57;UBERON:0006241!8.20e-15!57;UBERON:0007135!8.20e-15!57;UBERON:0002616!7.24e-13!59;UBERON:0007023!9.39e-13!115;UBERON:0003056!4.99e-12!61;UBERON:0000955!2.59e-11!69;UBERON:0006238!2.59e-11!69;UBERON:0001017!5.34e-10!82;UBERON:0003075!8.58e-10!86;UBERON:0007284!8.58e-10!86;UBERON:0002346!2.92e-09!90;UBERON:0005743!6.58e-09!86;UBERON:0000073!3.03e-07!94;UBERON:0001016!3.03e-07!94;UBERON:0000200!3.28e-07!6;UBERON:0002420!5.11e-07!9;UBERON:0007245!5.11e-07!9;UBERON:0010009!5.11e-07!9;UBERON:0010011!5.11e-07!9;UBERON:0000454!5.11e-07!9;UBERON:0004765!6.90e-07!101;UBERON:0001434!6.90e-07!101;UBERON:0001474!7.19e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.96e-41;32!UBERON:0002619;9.80e-41;22!UBERON:0002791;3.64e-38;32!UBERON:0001893;4.41e-38;34!UBERON:0001950;9.61e-37;20!UBERON:0000956;2.79e-35;25!UBERON:0000203;2.79e-35;25!UBERON:0003528;6.27e-35;34!UBERON:0002020;6.27e-35;34!UBERON:0002780;7.56e-29;41!UBERON:0001890;7.56e-29;41!UBERON:0000073;1.40e-16;53!UBERON:0002616;1.40e-16;53!UBERON:0000200;1.51e-14;6!UBERON:0000955;1.70e-13;68!UBERON:0002420;2.16e-12;9!UBERON:0007245;2.16e-12;9!UBERON:0010009;2.16e-12;9!UBERON:0010011;2.16e-12;9!UBERON:0000454;2.16e-12;9!UBERON:0001871;4.43e-12;6!UBERON:0000349;4.98e-12;5!UBERON:0001017;8.45e-12;75!UBERON:0001872;2.86e-11;5!UBERON:0000369;3.12e-10;4!UBERON:0002435;3.12e-10;4!UBERON:0000204;3.12e-10;4!UBERON:0009663;1.47e-08;7!UBERON:0001870;3.53e-08;3!UBERON:0002021;3.53e-08;5!UBERON:0005383;6.18e-08;3!UBERON:0005382;6.18e-08;3!UBERON:0001016;2.89e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,4.34e-46,32;UBERON:0001893,5.78e-43,34;UBERON:0002791,2.05e-42,32;UBERON:0002619,1.07e-40,22;UBERON:0002780,3.82e-40,41;UBERON:0001890,3.82e-40,41;UBERON:0003080,3.82e-40,41;UBERON:0006240,3.82e-40,41;UBERON:0003528,1.60e-39,34;UBERON:0002020,1.60e-39,34;UBERON:0001950,1.11e-36,20;UBERON:0000956,3.01e-35,25;UBERON:0000203,3.01e-35,25;UBERON:0000073,3.22e-29,53;UBERON:0002616,3.22e-29,53;UBERON:0001049,3.25e-27,56;UBERON:0005068,3.25e-27,56;UBERON:0006241,3.25e-27,56;UBERON:0007135,3.25e-27,56;UBERON:0003056,2.60e-24,61;UBERON:0000955,3.84e-24,68;UBERON:0006238,3.84e-24,68;UBERON:0001017,1.51e-20,81;UBERON:0001016,1.26e-17,89;UBERON:0003075,2.23e-17,82;UBERON:0007284,2.23e-17,82;UBERON:0010371,2.01e-16,104;UBERON:0002346,3.48e-16,86;UBERON:0007023,1.47e-15,114;UBERON:0000200,1.35e-14,6;UBERON:0002420,1.76e-12,9;UBERON:0007245,1.76e-12,9;UBERON:0010009,1.76e-12,9;UBERON:0010011,1.76e-12,9;UBERON:0000454,1.76e-12,9;UBERON:0001871,4.41e-12,6;UBERON:0000349,4.52e-12,5;UBERON:0001872,3.25e-11,5;UBERON:0000369,2.40e-10,4;UBERON:0002435,2.40e-10,4;UBERON:0000204,2.40e-10,4;UBERON:0010082,2.40e-10,4;UBERON:0010314,3.93e-10,132;UBERON:0004121,4.12e-09,171;UBERON:0000924,4.12e-09,171;UBERON:0006601,4.12e-09,171;UBERON:0009663,1.25e-08,7;UBERON:0002021,3.41e-08,5;UBERON:0001870,3.75e-08,3;UBERON:0005383,4.75e-08,3;UBERON:0005382,4.75e-08,3;UBERON:0002371,5.77e-08,76;UBERON:0001474,5.08e-07,82 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.314843125254717,0,0,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0.651032612147555,0,0,0.257575567634187,0.436194716338694,0.377875943688809,0.970336244751265,1.16214518452842,0.411167888021826,1.23882548358041,0.863077176966451,1.0246428261164,1.18241114944293,5.17118521104928,7.10033151942209,13.5426486594342,1.12945403725563,1.36453075028923,1.34834090667051,3.36692281607993,4.17207735198922,7.03270838378945,0,0.398927315243264,0.426224750532694,0.870627715885752,1.70215567407342,0,1.50749199154046,2.08593167368081,1.52032191293582,0,0,0.949387162322653,0.211255286311942,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0,1.18800285728205,0.247266929278557,1.82032272387605,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.337552664482532,0.292311015483596,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,3.1608175918371,2.57545848628462,0,0,0,0,0,0,0,0,1.15014803749563,68.4801900675361,0.704387472105808,10.9883901236609,1.15295962733569,5.6809095041871,0.380987365753014,2.29193055334967,1.17217447210047,1.71072446022705,0.205654985406647,4.50514586765876,0.571652865261156,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74106321552464,0,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.553107505625109,0,0.391602314925481,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.771048469013278,1.77561725313127,0.574890092096664,0,0.464841513839837,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.308097234229289,0.767518373630648,0,0,0,0.170453254832202,0.712256285173899,0,0,0,0,0,0,0,3.69640296211307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0,3.39024349860728,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,1.68886108238131,0.658589785919804,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0,0.284136146806413,0.23874448473769,0,0,3.97659059106519,7.03347082052564,0,0,35.4690685655029,0.996239941255349,1.10513566212459,0,0.306806047506464,0.123084805461069,0,0,0,0,0.493217028184668,0,0,3.87733098438087,9.46234601250883,0,1.30213880542617,0,0,0,0,0,0,0,0.347249989866585,1.77148277162768,10.2506972831597,0,0,0,11.6274260491605,0,0.557694977114413,0,0,0,0,0.108647371922008,0,0,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0,0,2.37216902944498,0.494255755786011,0,0.337005664903385,0.802577647298789,5.62234669740814,0,0.978323094660449,0,0,0,2.14250933141343,0.252746318513952,0.901940516486955,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.881931576729399,0,0,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,8.10378188235247,0,0,1.49417096317547,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,3.60252173225874,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,11.9284453471395,1.36203406111576,0,0.137539436597234,0,2.4747128070665,0.77380195455795,8.32268926214938,0.335434687599266,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0,0,1.65695622138878,0,0,0,0,1.08803560673895,0,0,0,0,8.86068179966986,7.44360215901975,5.00763722825999,0,0.110929051536852,0.124192805882767,0,0,1.97143852804142,9.70582134052889,0.705797459094515,0,0,0.597019211547496,0,2.77402930751307,0.378806010550178,0,0,0.686520205190771,1.81477108515887,0.777186002913902,0,0,0,0.155262956876259,1.24411862352257,0.53168342911599,0,0,0,0,0,0,0,0.796191777397232,0,0,0.673498977531838,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60421398834519,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,1.24415452006595,0,0.107824811396682,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0,10.9831974914946,5.6678630530234,3.67157875831448,14.1530291326121,0.504143392443436,8.85212831541989,7.75083099032885,0,0,0,0,0.346576998451015,0,0.690359926060101,0.198916222116275,0.225630985047772,0,0,0,0.163771917510097,0.295712172434091,6.75375846183946,1.56215619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| |||
|short_description=p2@EGR3 | |||
}} |
Revision as of 21:07, 22 January 2014
Short description: | p2@EGR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EGR3_5end |
Coexpression cluster: | C1242_Mast_anaplastic_putamen_caudate_nucleus_occipital_insula |
Association with transcript: | 81bp_to_ENST00000519492_5end |
EntrezGene: | EGR3 |
HGNC: | 3240 |
UniProt: | E5RIM5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.50e-12 | 72 |
classical monocyte | 1.84e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.84e-10 | 42 |
granulocyte monocyte progenitor cell | 1.01e-09 | 67 |
myeloid lineage restricted progenitor cell | 7.12e-09 | 66 |
defensive cell | 1.21e-08 | 48 |
phagocyte | 1.21e-08 | 48 |
mast cell | 5.99e-08 | 5 |
basophil mast progenitor cell | 5.99e-08 | 5 |
myeloid cell | 7.34e-07 | 108 |
common myeloid progenitor | 7.34e-07 | 108 |
light melanocyte | 7.37e-07 | 3 |