FFCP PHASE1:Hg19::chr12:49375285..49375341,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:49375285..49375341,- | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_at_chr12:49375285..49375341,- | |description=CAGE_peak_at_chr12:49375285..49375341,- | ||
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|ontology_enrichment_celltype=CL:0000791!2.44e-17!18;CL:0000789!2.44e-17!18;CL:0002420!2.44e-17!18;CL:0002419!2.44e-17!18;CL:0000790!2.44e-17!18;CL:0000084!1.87e-13!25;CL:0000827!1.87e-13!25;CL:0000625!8.77e-13!11;CL:0000838!1.28e-07!52;CL:0000624!1.48e-07!6;CL:0000542!2.42e-07!53;CL:0000051!2.42e-07!53 | |ontology_enrichment_celltype=CL:0000791!2.44e-17!18;CL:0000789!2.44e-17!18;CL:0002420!2.44e-17!18;CL:0002419!2.44e-17!18;CL:0000790!2.44e-17!18;CL:0000084!1.87e-13!25;CL:0000827!1.87e-13!25;CL:0000625!8.77e-13!11;CL:0000838!1.28e-07!52;CL:0000624!1.48e-07!6;CL:0000542!2.42e-07!53;CL:0000051!2.42e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.08e-27;18!CL:0000789;9.08e-27;18!CL:0002419;9.08e-27;18!CL:0000625;3.88e-23;11!CL:0000084;2.67e-18;25!CL:0000623;2.09e-08;3!CL:0000624;1.29e-07;6 | |ontology_enrichment_celltype_v019=CL:0000791;9.08e-27;18!CL:0000789;9.08e-27;18!CL:0002419;9.08e-27;18!CL:0000625;3.88e-23;11!CL:0000084;2.67e-18;25!CL:0000623;2.09e-08;3!CL:0000624;1.29e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.70e-27,18;CL:0000789,7.70e-27,18;CL:0002420,7.70e-27,18;CL:0002419,7.70e-27,18;CL:0000790,7.70e-27,18;CL:0000625,4.39e-23,11;CL:0000084,2.38e-18,25;CL:0000827,2.38e-18,25;CL:0000838,5.78e-11,52;CL:0000542,1.11e-10,53;CL:0000051,1.11e-10,53;CL:0000623,1.54e-08,3;CL:0000825,1.54e-08,3;CL:0000624,1.02e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;9.08e-27;18!UBERON:0006601;1.31e-07;82!UBERON:0010122;1.46e-07;2 | |ontology_enrichment_development_v019=CL:0000790;9.08e-27;18!UBERON:0006601;1.31e-07;82!UBERON:0010122;1.46e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.17e-36!115;UBERON:0001049!1.22e-31!57;UBERON:0005068!1.22e-31!57;UBERON:0006241!1.22e-31!57;UBERON:0007135!1.22e-31!57;UBERON:0002780!2.38e-31!41;UBERON:0001890!2.38e-31!41;UBERON:0006240!2.38e-31!41;UBERON:0003080!2.76e-30!42;UBERON:0001869!3.24e-29!32;UBERON:0001893!1.01e-28!34;UBERON:0002020!1.67e-28!34;UBERON:0003528!1.67e-28!34;UBERON:0002791!1.37e-27!33;UBERON:0002616!1.98e-25!59;UBERON:0002619!5.35e-25!22;UBERON:0001017!1.03e-23!82;UBERON:0000955!4.40e-23!69;UBERON:0006238!4.40e-23!69;UBERON:0005743!1.08e-22!86;UBERON:0001950!1.38e-22!20;UBERON:0000956!4.41e-21!25;UBERON:0000203!4.41e-21!25;UBERON:0000073!7.57e-20!94;UBERON:0001016!7.57e-20!94;UBERON:0002346!9.38e-20!90;UBERON:0003075!2.31e-19!86;UBERON:0007284!2.31e-19!86;UBERON:0003056!9.74e-18!61;UBERON:0000153!1.07e-12!129;UBERON:0007811!1.07e-12!129;UBERON:0000033!2.11e-11!123;UBERON:0002420!1.33e-09!9;UBERON:0007245!1.33e-09!9;UBERON:0010009!1.33e-09!9;UBERON:0010011!1.33e-09!9;UBERON:0000454!1.33e-09!9;UBERON:0002308!7.75e-09!9;UBERON:0000125!7.75e-09!9;UBERON:0000200!1.39e-08!6;UBERON:0001871!2.08e-08!7;UBERON:0000924!4.28e-08!173;UBERON:0006601!4.28e-08!173;UBERON:0004121!1.05e-07!169;UBERON:0000349!1.10e-07!5;UBERON:0001872!2.39e-07!5;UBERON:0009663!2.95e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!2.17e-36!115;UBERON:0001049!1.22e-31!57;UBERON:0005068!1.22e-31!57;UBERON:0006241!1.22e-31!57;UBERON:0007135!1.22e-31!57;UBERON:0002780!2.38e-31!41;UBERON:0001890!2.38e-31!41;UBERON:0006240!2.38e-31!41;UBERON:0003080!2.76e-30!42;UBERON:0001869!3.24e-29!32;UBERON:0001893!1.01e-28!34;UBERON:0002020!1.67e-28!34;UBERON:0003528!1.67e-28!34;UBERON:0002791!1.37e-27!33;UBERON:0002616!1.98e-25!59;UBERON:0002619!5.35e-25!22;UBERON:0001017!1.03e-23!82;UBERON:0000955!4.40e-23!69;UBERON:0006238!4.40e-23!69;UBERON:0005743!1.08e-22!86;UBERON:0001950!1.38e-22!20;UBERON:0000956!4.41e-21!25;UBERON:0000203!4.41e-21!25;UBERON:0000073!7.57e-20!94;UBERON:0001016!7.57e-20!94;UBERON:0002346!9.38e-20!90;UBERON:0003075!2.31e-19!86;UBERON:0007284!2.31e-19!86;UBERON:0003056!9.74e-18!61;UBERON:0000153!1.07e-12!129;UBERON:0007811!1.07e-12!129;UBERON:0000033!2.11e-11!123;UBERON:0002420!1.33e-09!9;UBERON:0007245!1.33e-09!9;UBERON:0010009!1.33e-09!9;UBERON:0010011!1.33e-09!9;UBERON:0000454!1.33e-09!9;UBERON:0002308!7.75e-09!9;UBERON:0000125!7.75e-09!9;UBERON:0000200!1.39e-08!6;UBERON:0001871!2.08e-08!7;UBERON:0000924!4.28e-08!173;UBERON:0006601!4.28e-08!173;UBERON:0004121!1.05e-07!169;UBERON:0000349!1.10e-07!5;UBERON:0001872!2.39e-07!5;UBERON:0009663!2.95e-07!7 | ||
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|short_description=p@chr12:49375285..49375341,- | |short_description=p@chr12:49375285..49375341,- | ||
}} | }} |
Latest revision as of 08:57, 24 July 2015
Short description: | p@chr12:49375285..49375341, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:49375285..49375341, - |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.70e-27 | 18 |
alpha-beta T cell | 7.70e-27 | 18 |
immature T cell | 7.70e-27 | 18 |
mature T cell | 7.70e-27 | 18 |
immature alpha-beta T cell | 7.70e-27 | 18 |
CD8-positive, alpha-beta T cell | 4.39e-23 | 11 |
T cell | 2.38e-18 | 25 |
pro-T cell | 2.38e-18 | 25 |
lymphoid lineage restricted progenitor cell | 5.78e-11 | 52 |
lymphocyte | 1.11e-10 | 53 |
common lymphoid progenitor | 1.11e-10 | 53 |
natural killer cell | 1.54e-08 | 3 |
pro-NK cell | 1.54e-08 | 3 |
CD4-positive, alpha-beta T cell | 1.02e-07 | 6 |