FFCP PHASE1:Hg19::chr19:42482880..42482902,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:42482880..42482902,+
|short_description=p@chr19:42482880..42482902,+
|description=CAGE_peak_at_chr19:42482880..42482902,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:42482880..42482902,+ | |||
|coexpression_cluster_id=C376 | |||
|description=CAGE_peak_at_chr19:42482880..42482902,+ | |||
|id=chr19:42482880..42482902,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.42e-16;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;6.08e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.92e-47!57;UBERON:0005068!1.92e-47!57;UBERON:0006241!1.92e-47!57;UBERON:0007135!1.92e-47!57;UBERON:0005743!2.69e-45!86;UBERON:0000073!5.43e-45!94;UBERON:0001016!5.43e-45!94;UBERON:0001017!2.89e-44!82;UBERON:0000955!2.03e-42!69;UBERON:0006238!2.03e-42!69;UBERON:0002616!1.24e-40!59;UBERON:0002780!2.82e-37!41;UBERON:0001890!2.82e-37!41;UBERON:0006240!2.82e-37!41;UBERON:0002346!4.79e-37!90;UBERON:0003080!3.87e-36!42;UBERON:0003075!4.21e-36!86;UBERON:0007284!4.21e-36!86;UBERON:0001893!3.47e-35!34;UBERON:0001869!4.03e-35!32;UBERON:0002020!8.82e-35!34;UBERON:0003528!8.82e-35!34;UBERON:0007023!1.41e-33!115;UBERON:0002791!1.54e-33!33;UBERON:0001950!3.48e-30!20;UBERON:0002619!1.07e-29!22;UBERON:0003056!1.17e-26!61;UBERON:0000956!1.97e-25!25;UBERON:0000203!1.97e-25!25;UBERON:0000153!8.57e-24!129;UBERON:0007811!8.57e-24!129;UBERON:0000924!9.10e-23!173;UBERON:0006601!9.10e-23!173;UBERON:0000033!1.15e-22!123;UBERON:0004121!9.07e-22!169;UBERON:0003076!4.18e-12!15;UBERON:0003057!4.18e-12!15;UBERON:0000025!2.72e-11!194;UBERON:0002420!6.13e-11!9;UBERON:0007245!6.13e-11!9;UBERON:0010009!6.13e-11!9;UBERON:0010011!6.13e-11!9;UBERON:0000454!6.13e-11!9;UBERON:0000200!7.23e-11!6;UBERON:0002308!1.02e-10!9;UBERON:0000125!1.02e-10!9;UBERON:0004733!1.73e-10!12;UBERON:0002028!1.73e-10!12;UBERON:0007277!1.73e-10!12;UBERON:0001871!3.33e-10!7;UBERON:0004732!1.65e-09!13;UBERON:0001872!2.88e-09!5;UBERON:0002021!3.83e-09!5;UBERON:0009663!3.71e-08!7;UBERON:0004111!4.16e-08!241;UBERON:0000064!6.09e-08!219;UBERON:0000369!1.73e-07!4;UBERON:0002435!1.73e-07!4;UBERON:0000204!1.73e-07!4;UBERON:0010082!1.73e-07!4;UBERON:0002298!1.99e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.04e-40;20!UBERON:0002619;4.33e-36;22!UBERON:0001893;1.15e-33;34!UBERON:0001869;4.64e-32;32!UBERON:0000956;1.68e-31;25!UBERON:0000203;1.68e-31;25!UBERON:0000073;8.62e-30;53!UBERON:0002616;8.62e-30;53!UBERON:0002791;8.97e-29;32!UBERON:0003528;1.14e-26;34!UBERON:0002020;1.14e-26;34!UBERON:0002780;1.89e-26;41!UBERON:0001890;1.89e-26;41!UBERON:0000955;4.12e-26;68!UBERON:0001017;8.67e-21;75!UBERON:0001016;1.02e-19;83!UBERON:0001872;2.92e-13;5!UBERON:0002021;5.38e-13;5!UBERON:0001896;4.92e-12;3!UBERON:0005290;4.92e-12;3!UBERON:0004733;2.05e-11;12!UBERON:0002028;2.05e-11;12!UBERON:0000200;2.98e-11;6!UBERON:0002298;1.16e-10;6!UBERON:0004732;1.74e-10;13!UBERON:0007023;9.79e-10;114!UBERON:0001871;2.40e-09;6!UBERON:0011216;7.86e-08;132!UBERON:0000013;3.41e-07;5!UBERON:0002410;3.41e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.42e-54,89;UBERON:0001049,5.57e-52,56;UBERON:0005068,5.57e-52,56;UBERON:0006241,5.57e-52,56;UBERON:0007135,5.57e-52,56;UBERON:0000073,3.11e-51,53;UBERON:0002616,3.11e-51,53;UBERON:0000955,5.10e-51,68;UBERON:0006238,5.10e-51,68;UBERON:0001017,7.69e-51,81;UBERON:0002780,6.54e-41,41;UBERON:0001890,6.54e-41,41;UBERON:0003080,6.54e-41,41;UBERON:0006240,6.54e-41,41;UBERON:0001950,4.22e-40,20;UBERON:0002346,4.18e-39,86;UBERON:0003075,1.05e-38,82;UBERON:0007284,1.05e-38,82;UBERON:0001893,4.70e-37,34;UBERON:0002619,2.72e-36,22;UBERON:0001869,1.34e-35,32;UBERON:0007023,4.66e-32,114;UBERON:0000956,1.12e-31,25;UBERON:0000203,1.12e-31,25;UBERON:0002791,1.95e-31,32;UBERON:0003056,3.05e-31,61;UBERON:0003528,2.14e-29,34;UBERON:0002020,2.14e-29,34;UBERON:0010371,5.45e-29,104;UBERON:0004121,1.93e-27,171;UBERON:0000924,1.93e-27,171;UBERON:0006601,1.93e-27,171;UBERON:0010314,2.56e-26,132;UBERON:0011216,3.50e-20,223;UBERON:0000025,2.40e-13,192;UBERON:0001872,2.42e-13,5;UBERON:0002021,4.99e-13,5;UBERON:0003076,5.76e-12,15;UBERON:0003057,5.76e-12,15;UBERON:0001896,9.80e-12,3;UBERON:0005290,9.80e-12,3;UBERON:0010096,9.80e-12,3;UBERON:0000200,2.29e-11,6;UBERON:0004733,3.10e-11,12;UBERON:0002028,3.10e-11,12;UBERON:0007277,3.10e-11,12;UBERON:0002298,1.90e-10,6;UBERON:0004732,2.55e-10,13;UBERON:0001871,2.00e-09,6;UBERON:0004111,3.23e-09,240;UBERON:0000013,3.41e-07,5;UBERON:0002410,3.41e-07,5;UBERON:0000483,5.83e-07,306;UBERON:0000119,8.02e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.46480320348181,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.256686072559497,0,0,0,1.50764638800914,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.28853842595289,0.924843963529383,0.478278818186467,0.199579371432817,0,0,0,0,0,0.313359791546046,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,3.97659059106519,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5706584453331,2.04089815956073,15.9691038400955,0,0,0,0.1137934482855,0,0,1.37897349296586,2.62444152044929,0.868124974666461,0.885741385813839,0.844175070377856,3.05163472634166,0.663475559587348,7.97978571174578,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.208843899010911,1.21322039365219,0,2.10838001152805,0,0,0,0,0,3.0607276163049,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,10.169133335124,0,0,6.71094437132314,0.195551382734803,0,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.687481272035051,0,2.1964690054889,3.43380838509257,0.223171457441873,0.671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0.137539436597234,0,0,0,5.64970876919629,0,0,0,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0.113312091520126,0,0,0.517131825446202,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86068179966986,1.83039397352945,0.751145584238999,1.14681839138014,1.10929051536852,3.16691655001056,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,1.66262682694747,1.40172254815686,0,1.31051565830417,0,0.212574920101683,0,0,0,0.788617450012533,0,0,0,5.13833800771676,2.8339315265117,0.478901577171454,1.43581454968528,4.28521883576921,7.95308403338506,1.29180516505481,0,0.196295437002051,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,9.25264909272007,1.56215619722769,0.413373593002368,6.84890750094194,4.92277328116398,0,0,1.05522746615772,0,0.535701835878287,3.69912094440706,0,0,0,0,0,8.22433769019664,8.74777888385893,0.236387681767936,0,0,2.35673384874003,0,0,0,0,2.64463213453628,1.58013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,1.42922671769058,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0.785233868459781,0,3.3812458206672,0,0,0,0,0,0,0,0,0,0,0,8.22697031310068,4.36350690340377,0,0,0,0,0,0.327796715891087,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0.682008283964155,1.87574891109325,1.65833887891756,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.46480320348181,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.256686072559497,0,0,0,1.50764638800914,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.28853842595289,0.924843963529383,0.478278818186467,0.199579371432817,0,0,0,0,0,0.313359791546046,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,3.97659059106519,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5706584453331,2.04089815956073,15.9691038400955,0,0,0,0.1137934482855,0,0,1.37897349296586,2.62444152044929,0.868124974666461,0.885741385813839,0.844175070377856,3.05163472634166,0.663475559587348,7.97978571174578,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.208843899010911,1.21322039365219,0,2.10838001152805,0,0,0,0,0,3.0607276163049,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,10.169133335124,0,0,6.71094437132314,0.195551382734803,0,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.687481272035051,0,2.1964690054889,3.43380838509257,0.223171457441873,0.671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0,0.137539436597234,0,0,0,5.64970876919629,0,0,0,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0,0.113312091520126,0,0,0.517131825446202,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.86068179966986,1.83039397352945,0.751145584238999,1.14681839138014,1.10929051536852,3.16691655001056,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,1.66262682694747,1.40172254815686,0,1.31051565830417,0,0.212574920101683,0,0,0,0.788617450012533,0,0,0,5.13833800771676,2.8339315265117,0.478901577171454,1.43581454968528,4.28521883576921,7.95308403338506,1.29180516505481,0,0.196295437002051,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,9.25264909272007,1.56215619722769,0.413373593002368,6.84890750094194,4.92277328116398,0,0,1.05522746615772,0,0.535701835878287,3.69912094440706,0,0,0,0,0,8.22433769019664,8.74777888385893,0.236387681767936,0,0,2.35673384874003,0,0,0,0,2.64463213453628,1.58013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,1.42922671769058,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0.785233868459781,0,3.3812458206672,0,0,0,0,0,0,0,0,0,0,0,8.22697031310068,4.36350690340377,0,0,0,0,0,0.327796715891087,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0.682008283964155,1.87574891109325,1.65833887891756,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr19:42482880..42482902,+ | |||
}} | }} |
Latest revision as of 08:45, 26 July 2015
Short description: | p@chr19:42482880..42482902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42482880..42482902, + |
Coexpression cluster: | C376_brain_temporal_insula_frontal_occipital_postcentral_paracentral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 6.09e-09 | 2 |