FFCP PHASE1:Hg19::chr2:131684411..131684414,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:131684411..131684414,+ | |||
|coexpression_cluster_id=C2658 | |||
|description=CAGE_peak_at_chr2:131684411..131684414,+ | |description=CAGE_peak_at_chr2:131684411..131684414,+ | ||
|id=chr2:131684411..131684414,+ | |id=chr2:131684411..131684414,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;9.57e-20;2!UBERON:0006241;5.03e-14;3!UBERON:0003057;5.03e-14;3!UBERON:0006601;6.11e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.52e-37!57;UBERON:0005068!7.52e-37!57;UBERON:0006241!7.52e-37!57;UBERON:0007135!7.52e-37!57;UBERON:0001017!6.34e-31!82;UBERON:0000955!5.51e-30!69;UBERON:0006238!5.51e-30!69;UBERON:0002616!3.44e-29!59;UBERON:0005743!8.95e-29!86;UBERON:0002780!3.10e-27!41;UBERON:0001890!3.10e-27!41;UBERON:0006240!3.10e-27!41;UBERON:0000033!8.60e-27!123;UBERON:0000153!9.26e-27!129;UBERON:0007811!9.26e-27!129;UBERON:0003080!2.35e-26!42;UBERON:0000073!1.30e-24!94;UBERON:0001016!1.30e-24!94;UBERON:0002346!4.73e-24!90;UBERON:0002020!4.65e-23!34;UBERON:0003528!4.65e-23!34;UBERON:0007023!4.96e-23!115;UBERON:0001893!5.96e-23!34;UBERON:0003075!4.36e-22!86;UBERON:0007284!4.36e-22!86;UBERON:0002791!8.32e-22!33;UBERON:0000924!1.98e-20!173;UBERON:0006601!1.98e-20!173;UBERON:0001869!2.81e-20!32;UBERON:0004121!8.62e-19!169;UBERON:0003056!1.86e-17!61;UBERON:0002619!1.08e-14!22;UBERON:0001950!3.33e-14!20;UBERON:0000956!6.33e-14!25;UBERON:0000203!6.33e-14!25;UBERON:0002420!1.39e-11!9;UBERON:0007245!1.39e-11!9;UBERON:0010009!1.39e-11!9;UBERON:0010011!1.39e-11!9;UBERON:0000454!1.39e-11!9;UBERON:0003076!1.75e-11!15;UBERON:0003057!1.75e-11!15;UBERON:0002308!2.02e-11!9;UBERON:0000125!2.02e-11!9;UBERON:0000477!1.76e-10!286;UBERON:0004111!3.07e-10!241;UBERON:0000200!3.91e-10!6;UBERON:0002298!4.66e-10!8;UBERON:0000475!9.52e-10!365;UBERON:0000064!3.64e-09!219;UBERON:0009663!1.23e-08!7;UBERON:0000062!3.13e-08!511;UBERON:0000025!5.26e-08!194;UBERON:0004733!7.13e-08!12;UBERON:0002028!7.13e-08!12;UBERON:0007277!7.13e-08!12;UBERON:0001871!1.28e-07!7;UBERON:0000481!3.00e-07!347;UBERON:0000369!3.46e-07!4;UBERON:0002435!3.46e-07!4;UBERON:0000204!3.46e-07!4;UBERON:0010082!3.46e-07!4;UBERON:0000922!3.52e-07!612;UBERON:0004732!4.02e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;3.23e-26;9!UBERON:0000125;3.23e-26;9!UBERON:0007245;3.23e-26;9!UBERON:0002308;3.23e-26;9!UBERON:0010009;3.23e-26;9!UBERON:0010011;3.23e-26;9!UBERON:0000454;3.23e-26;9!UBERON:0003528;8.35e-25;34!UBERON:0002020;8.35e-25;34!UBERON:0002791;1.34e-23;32!UBERON:0009663;5.66e-22;7!UBERON:0002780;1.28e-21;41!UBERON:0001890;1.28e-21;41!UBERON:0002702;3.84e-20;2!UBERON:0001893;5.34e-20;34!UBERON:0001873;9.57e-20;2!UBERON:0001869;1.69e-19;32!UBERON:0000073;6.08e-19;53!UBERON:0002616;6.08e-19;53!UBERON:0000200;7.04e-15;6!UBERON:0002619;1.59e-14;22!UBERON:0002240;5.03e-14;3!UBERON:0005174;5.03e-14;3!UBERON:0001137;5.03e-14;3!UBERON:0001870;9.28e-14;3!UBERON:0005383;1.70e-13;3!UBERON:0005382;1.70e-13;3!UBERON:0001017;4.34e-13;75!UBERON:0000956;8.39e-13;25!UBERON:0000203;8.39e-13;25!UBERON:0001016;1.19e-12;83!UBERON:0002038;2.79e-11;1!UBERON:0009661;2.79e-11;1!UBERON:0002950;2.79e-11;1!UBERON:0001891;2.79e-11;1!UBERON:0001950;3.57e-11;20!UBERON:0000369;2.36e-10;4!UBERON:0002435;2.36e-10;4!UBERON:0000204;2.36e-10;4!UBERON:0000955;2.28e-09;68!UBERON:0000349;1.11e-08;5!UBERON:0002298;2.57e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.02e-35,56;UBERON:0005068,2.02e-35,56;UBERON:0006241,2.02e-35,56;UBERON:0007135,2.02e-35,56;UBERON:0003528,3.32e-31,34;UBERON:0002020,3.32e-31,34;UBERON:0001017,1.27e-30,81;UBERON:0000073,7.71e-28,53;UBERON:0002616,7.71e-28,53;UBERON:0002791,2.01e-27,32;UBERON:0001016,2.23e-27,89;UBERON:0002420,3.41e-26,9;UBERON:0007245,3.41e-26,9;UBERON:0010009,3.41e-26,9;UBERON:0010011,3.41e-26,9;UBERON:0000454,3.41e-26,9;UBERON:0000125,4.68e-26,9;UBERON:0002308,4.68e-26,9;UBERON:0002780,7.39e-26,41;UBERON:0001890,7.39e-26,41;UBERON:0003080,7.39e-26,41;UBERON:0006240,7.39e-26,41;UBERON:0001893,8.87e-26,34;UBERON:0000955,1.80e-24,68;UBERON:0006238,1.80e-24,68;UBERON:0003075,1.33e-23,82;UBERON:0007284,1.33e-23,82;UBERON:0002346,2.07e-22,86;UBERON:0001869,4.20e-22,32;UBERON:0009663,8.52e-22,7;UBERON:0002702,3.02e-20,2;UBERON:0001873,1.28e-19,2;UBERON:0010122,1.28e-19,2;UBERON:0010371,3.66e-18,104;UBERON:0003056,5.46e-17,61;UBERON:0007023,1.99e-16,114;UBERON:0010314,6.90e-16,132;UBERON:0004121,4.95e-15,171;UBERON:0000924,4.95e-15,171;UBERON:0006601,4.95e-15,171;UBERON:0000200,5.83e-15,6;UBERON:0002619,1.08e-14,22;UBERON:0002240,5.04e-14,3;UBERON:0005174,5.04e-14,3;UBERON:0001137,5.04e-14,3;UBERON:0001870,7.92e-14,3;UBERON:0005383,2.06e-13,3;UBERON:0005382,2.06e-13,3;UBERON:0000956,5.98e-13,25;UBERON:0000203,5.98e-13,25;UBERON:0011216,2.41e-12,223;UBERON:0001950,2.52e-11,20;UBERON:0002038,2.79e-11,1;UBERON:0009661,2.79e-11,1;UBERON:0002950,2.79e-11,1;UBERON:0001891,2.79e-11,1;UBERON:0009616,2.79e-11,1;UBERON:0010286,2.79e-11,1;UBERON:0003076,1.46e-10,15;UBERON:0003057,1.46e-10,15;UBERON:0000369,2.72e-10,4;UBERON:0002435,2.72e-10,4;UBERON:0000204,2.72e-10,4;UBERON:0010082,2.72e-10,4;UBERON:0000025,3.69e-10,192;UBERON:0000349,8.67e-09,5;UBERON:0004111,8.78e-09,240;UBERON:0002298,2.53e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0.265059536642971,0.232387885739037,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0.268675568108545,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0.994147647766298,1.96937182974718,0.222617410045812,0,0,0,0,0.503865495708552,1.22722419002586,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.341380344856499,0.508507300585533,0,0,0,0,1.77148277162768,1.08536794762867,0,0.442317039724898,0.886642856860642,0,0.10893846351899,0.278847488557207,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.943615861729479,0,0.468528891450678,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0,0,0.391969589657511,0,0.17472666824203,0,0.677294319023596,0.219267951258557,0.328461828212837,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0.316553979779393,0,0,0.213452994739353,0,0,0.114536596165916,0,0.720273989940749,0.124252535565433,0.707082103850386,0,0.104602846312333,0,0,0,1.09524303113594,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,4.22230558945884,0,0,0,0,0,0.546746009922222,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.646414781807753,1.45455861916959,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,1.77213635993397,0.732157589411779,2.003054891304,0.573409195690071,2.21858103073705,0.869349641179368,0.138348634936231,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,1.91560630868582,0.615349092722265,0,0.345786262321089,0.484426936895553,0,0.196295437002051,0,0.550285795565037,0,0,0,0.198916222116275,0,0,1.56302802246618,0,0,0,0.405225507710368,0,0.206686796501184,0.317079050969534,0,0,0,0.351742488719241,0.127762427639595,0,0.672567444437648,0,0.227662191351298,0,0,0,0.679697329768317,0.460409414939944,0,0.111231401892069,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0.62164849248911,0.6828739083758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.219881033490858,0,0,0,0,0,0.707029641304878,0.196308467114945,2.0793248022896,2.5359343655004,0,0,0,0.299823467774787,0,0,0,0,0,3.01013124618048,0,0.815897882290976,0,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0.26721740526556,0,0,0.0757786982182394,0,0.829169439458779,2.68925789240928,0.213233981900981,0,0,0.0620747142958579,0,0.12729431655633,0.404234377916439,1.08858373948481,0.684466602170562,0.26940821205835,0.143444410785353,0,0.325613074443898,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0.265059536642971,0.232387885739037,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0.268675568108545,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0.994147647766298,1.96937182974718,0.222617410045812,0,0,0,0,0.503865495708552,1.22722419002586,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.341380344856499,0.508507300585533,0,0,0,0,1.77148277162768,1.08536794762867,0,0.442317039724898,0.886642856860642,0,0.10893846351899,0.278847488557207,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.943615861729479,0,0.468528891450678,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0,0,0.391969589657511,0,0.17472666824203,0,0.677294319023596,0.219267951258557,0.328461828212837,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0.316553979779393,0,0,0.213452994739353,0,0,0.114536596165916,0,0.720273989940749,0.124252535565433,0.707082103850386,0,0.104602846312333,0,0,0,1.09524303113594,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,4.22230558945884,0,0,0,0,0,0.546746009922222,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.646414781807753,1.45455861916959,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,1.77213635993397,0.732157589411779,2.003054891304,0.573409195690071,2.21858103073705,0.869349641179368,0.138348634936231,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,1.91560630868582,0.615349092722265,0,0.345786262321089,0.484426936895553,0,0.196295437002051,0,0.550285795565037,0,0,0,0.198916222116275,0,0,1.56302802246618,0,0,0,0.405225507710368,0,0.206686796501184,0.317079050969534,0,0,0,0.351742488719241,0.127762427639595,0,0.672567444437648,0,0.227662191351298,0,0,0,0.679697329768317,0.460409414939944,0,0.111231401892069,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0.62164849248911,0.6828739083758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.219881033490858,0,0,0,0,0,0.707029641304878,0.196308467114945,2.0793248022896,2.5359343655004,0,0,0,0.299823467774787,0,0,0,0,0,3.01013124618048,0,0.815897882290976,0,0,0,0,0,0,0.218531143927391,0,0.101988829741982,0.26721740526556,0,0,0.0757786982182394,0,0.829169439458779,2.68925789240928,0.213233981900981,0,0,0.0620747142958579,0,0.12729431655633,0.404234377916439,1.08858373948481,0.684466602170562,0.26940821205835,0.143444410785353,0,0.325613074443898,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr2:131684411..131684414,+ | |short_description=p@chr2:131684411..131684414,+ | ||
}} | }} |
Latest revision as of 00:19, 29 July 2015
Short description: | p@chr2:131684411..131684414, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:131684411..131684414, + |
Coexpression cluster: | C2658_hippocampus_amygdala_medulla_thalamus_locus_substantia_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data