FFCP PHASE1:Hg19::chr2:220348295..220348300,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:220348295..220348300,+ | |||
|coexpression_cluster_id=C256 | |coexpression_cluster_id=C256 | ||
|description=CAGE_peak_at_chr2:220348295..220348300,+ | |description=CAGE_peak_at_chr2:220348295..220348300,+ | ||
|id=chr2:220348295..220348300,+ | |id=chr2:220348295..220348300,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.29e-10;82!UBERON:0006215;7.02e-08;3!UBERON:0006241;8.29e-08;3!UBERON:0003057;8.29e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002619;3.85e-31;22!UBERON:0000956;1.46e-27;25!UBERON:0000203;1.46e-27;25!UBERON:0003528;4.72e-26;34!UBERON:0002020;4.72e-26;34!UBERON:0001950;5.84e-24;20!UBERON:0001869;6.59e-22;32!UBERON:0002791;1.74e-20;32!UBERON:0001893;2.36e-20;34!UBERON:0000349;5.45e-17;5!UBERON:0000073;1.16e-14;53!UBERON:0002616;1.16e-14;53!UBERON:0000200;2.57e-14;6!UBERON:0002780;2.67e-14;41!UBERON:0001890;2.67e-14;41!UBERON:0001871;1.89e-12;6!UBERON:0000955;2.60e-12;68!UBERON:0001017;4.97e-12;75!UBERON:0001876;1.82e-11;2!UBERON:0002702;2.12e-11;2!UBERON:0002771;2.73e-11;2!UBERON:0001016;2.89e-11;83!UBERON:0001954;3.02e-11;2!UBERON:0003022;3.02e-11;2!UBERON:0002421;3.02e-11;2!UBERON:0002600;3.02e-11;2!UBERON:0001897;3.52e-11;2!UBERON:0010225;3.52e-11;2!UBERON:0002148;4.09e-11;2!UBERON:0006331;4.09e-11;2!UBERON:0009662;4.09e-11;2!UBERON:0002680;1.08e-09;9!UBERON:0001895;1.08e-09;9!UBERON:0001870;5.01e-08;3!UBERON:0000988;7.76e-08;3!UBERON:0002240;8.29e-08;3!UBERON:0005174;8.29e-08;3!UBERON:0001137;8.29e-08;3!UBERON:0004733;1.70e-07;12!UBERON:0002028;1.70e-07;12!UBERON:0004732;5.51e-07;13 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.98e-63!41;UBERON:0001890!1.98e-63!41;UBERON:0006240!1.98e-63!41;UBERON:0003080!8.11e-62!42;UBERON:0001049!3.98e-61!57;UBERON:0005068!3.98e-61!57;UBERON:0006241!3.98e-61!57;UBERON:0007135!3.98e-61!57;UBERON:0002616!1.68e-54!59;UBERON:0001893!1.39e-53!34;UBERON:0001017!3.25e-53!82;UBERON:0001869!7.42e-52!32;UBERON:0005743!1.82e-50!86;UBERON:0002791!5.59e-50!33;UBERON:0002020!8.63e-49!34;UBERON:0003528!8.63e-49!34;UBERON:0000955!1.28e-48!69;UBERON:0006238!1.28e-48!69;UBERON:0002619!2.74e-48!22;UBERON:0000073!4.11e-45!94;UBERON:0001016!4.11e-45!94;UBERON:0000956!2.75e-42!25;UBERON:0000203!2.75e-42!25;UBERON:0003075!1.69e-41!86;UBERON:0007284!1.69e-41!86;UBERON:0003056!4.57e-41!61;UBERON:0001950!1.80e-40!20;UBERON:0002346!2.25e-39!90;UBERON:0007023!5.98e-37!115;UBERON:0000033!9.82e-27!123;UBERON:0000153!3.38e-25!129;UBERON:0007811!3.38e-25!129;UBERON:0004121!2.87e-22!169;UBERON:0000924!1.35e-21!173;UBERON:0006601!1.35e-21!173;UBERON:0000200!1.41e-19!6;UBERON:0002021!1.77e-15!5;UBERON:0000349!2.22e-15!5;UBERON:0000025!1.01e-14!194;UBERON:0001894!5.72e-11!7;UBERON:0006222!5.72e-11!7;UBERON:0004111!1.45e-10!241;UBERON:0001870!2.01e-10!2;UBERON:0001954!2.21e-10!2;UBERON:0003022!2.21e-10!2;UBERON:0002421!2.21e-10!2;UBERON:0002600!2.21e-10!2;UBERON:0001897!3.06e-10!2;UBERON:0000119!9.16e-10!312;UBERON:0001871!1.21e-09!7;UBERON:0000483!4.15e-09!309;UBERON:0001872!9.51e-09!5;UBERON:0002420!1.06e-08!9;UBERON:0007245!1.06e-08!9;UBERON:0010009!1.06e-08!9;UBERON:0010011!1.06e-08!9;UBERON:0000454!1.06e-08!9;UBERON:0000477!1.14e-08!286;UBERON:0002308!1.25e-08!9;UBERON:0000125!1.25e-08!9;UBERON:0002771!2.44e-07!3;UBERON:0000475!2.81e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.85e-31;22!UBERON:0000956;1.46e-27;25!UBERON:0000203;1.46e-27;25!UBERON:0003528;4.72e-26;34!UBERON:0002020;4.72e-26;34!UBERON:0001950;5.84e-24;20!UBERON:0001869;6.59e-22;32!UBERON:0002791;1.74e-20;32!UBERON:0001893;2.36e-20;34!UBERON:0000349;5.45e-17;5!UBERON:0000073;1.16e-14;53!UBERON:0002616;1.16e-14;53!UBERON:0000200;2.57e-14;6!UBERON:0002780;2.67e-14;41!UBERON:0001890;2.67e-14;41!UBERON:0001871;1.89e-12;6!UBERON:0000955;2.60e-12;68!UBERON:0001017;4.97e-12;75!UBERON:0001876;1.82e-11;2!UBERON:0002702;2.12e-11;2!UBERON:0002771;2.73e-11;2!UBERON:0001016;2.89e-11;83!UBERON:0001954;3.02e-11;2!UBERON:0003022;3.02e-11;2!UBERON:0002421;3.02e-11;2!UBERON:0002600;3.02e-11;2!UBERON:0001897;3.52e-11;2!UBERON:0010225;3.52e-11;2!UBERON:0002148;4.09e-11;2!UBERON:0006331;4.09e-11;2!UBERON:0009662;4.09e-11;2!UBERON:0002680;1.08e-09;9!UBERON:0001895;1.08e-09;9!UBERON:0001870;5.01e-08;3!UBERON:0000988;7.76e-08;3!UBERON:0002240;8.29e-08;3!UBERON:0005174;8.29e-08;3!UBERON:0001137;8.29e-08;3!UBERON:0004733;1.70e-07;12!UBERON:0002028;1.70e-07;12!UBERON:0004732;5.51e-07;13 | |||
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|short_description=p@chr2:220348295..220348300,+ | |short_description=p@chr2:220348295..220348300,+ | ||
}} | }} |
Latest revision as of 06:57, 29 July 2015
Short description: | p@chr2:220348295..220348300, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:220348295..220348300, + |
Coexpression cluster: | C256_occipital_caudate_amygdala_medial_thalamus_hippocampus_medulla |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data