FFCP PHASE1:Hg19::chr5:115782080..115782113,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:115782080..115782113,- | |||
|coexpression_cluster_id=C1950 | |||
|description=CAGE_peak_at_chr5:115782080..115782113,- | |description=CAGE_peak_at_chr5:115782080..115782113,- | ||
|id=chr5:115782080..115782113,- | |id=chr5:115782080..115782113,- | ||
|ontology_enrichment_celltype=CL:0000047!1.07e-08!8;CL:0000148!4.32e-08!10;CL:0000541!4.32e-08!10;CL:0000540!7.22e-07!6;CL:0000031!7.22e-07!6;CL:0000404!7.22e-07!6;CL:0002322!9.24e-07!5 | |ontology_enrichment_celltype=CL:0000047!1.07e-08!8;CL:0000148!4.32e-08!10;CL:0000541!4.32e-08!10;CL:0000540!7.22e-07!6;CL:0000031!7.22e-07!6;CL:0000404!7.22e-07!6;CL:0002322!9.24e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.14e-14;10!CL:0000540;1.79e-11;6!CL:0000404;1.79e-11;6!CL:0002322;4.05e-11;5!CL:0000147;2.05e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.16e-14,8;CL:0000148,4.85e-14,10;CL:0000541,4.85e-14,10;CL:0000540,2.56e-11,6;CL:0000031,2.56e-11,6;CL:0000404,2.56e-11,6;CL:0002322,4.01e-11,5;CL:0000147,1.97e-09,14;CL:0000133,1.16e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.79e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.88e-34,81;UBERON:0001016,1.19e-32,89;UBERON:0001049,1.24e-31,56;UBERON:0005068,1.24e-31,56;UBERON:0006241,1.24e-31,56;UBERON:0007135,1.24e-31,56;UBERON:0000073,2.07e-27,53;UBERON:0002616,2.07e-27,53;UBERON:0000955,1.13e-21,68;UBERON:0006238,1.13e-21,68;UBERON:0003075,4.61e-21,82;UBERON:0007284,4.61e-21,82;UBERON:0002346,6.51e-21,86;UBERON:0002780,2.91e-20,41;UBERON:0001890,2.91e-20,41;UBERON:0003080,2.91e-20,41;UBERON:0006240,2.91e-20,41;UBERON:0010371,1.52e-18,104;UBERON:0003528,3.99e-17,34;UBERON:0002020,3.99e-17,34;UBERON:0004121,2.11e-15,171;UBERON:0000924,2.11e-15,171;UBERON:0006601,2.11e-15,171;UBERON:0001893,4.00e-15,34;UBERON:0002791,1.16e-14,32;UBERON:0003056,6.61e-14,61;UBERON:0011216,8.20e-14,223;UBERON:0007023,1.07e-13,114;UBERON:0003076,7.48e-13,15;UBERON:0003057,7.48e-13,15;UBERON:0001869,7.98e-13,32;UBERON:0010314,3.00e-12,132;UBERON:0002619,1.22e-10,22;UBERON:0000956,1.77e-10,25;UBERON:0000203,1.77e-10,25;UBERON:0001950,5.10e-10,20;UBERON:0004732,6.46e-10,13;UBERON:0000125,9.22e-09,9;UBERON:0002308,9.22e-09,9;UBERON:0002784,1.17e-08,4;UBERON:0004733,1.89e-08,12;UBERON:0002028,1.89e-08,12;UBERON:0007277,1.89e-08,12;UBERON:0002298,3.37e-07,6;UBERON:0001894,5.70e-07,7;UBERON:0006222,5.70e-07,7;UBERON:0002680,6.19e-07,9;UBERON:0001895,6.19e-07,9;UBERON:0010092,6.19e-07,9;UBERON:0002240,9.44e-07,3;UBERON:0005174,9.44e-07,3;UBERON:0001137,9.44e-07,3 | |||
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|short_description=p@chr5:115782080..115782113,- | |short_description=p@chr5:115782080..115782113,- | ||
}} | }} |
Latest revision as of 08:55, 30 July 2015
Short description: | p@chr5:115782080..115782113, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:115782080..115782113, - |
Coexpression cluster: | C1950_testicular_H9_teratocarcinoma_Neural_iPS_small_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.16e-14 | 8 |
melanocyte | 4.85e-14 | 10 |
melanoblast | 4.85e-14 | 10 |
neuron | 2.56e-11 | 6 |
neuroblast | 2.56e-11 | 6 |
electrically signaling cell | 2.56e-11 | 6 |
embryonic stem cell | 4.01e-11 | 5 |
pigment cell | 1.97e-09 | 14 |
neurectodermal cell | 1.16e-07 | 59 |