FFCP PHASE1:Mm9::chr5:136386450..136386468,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=666 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:136386450..136386468,- | |||
|description=CAGE_peak_at_chr5:136386450..136386468,- | |description=CAGE_peak_at_chr5:136386450..136386468,- | ||
|id=chr5:136386450..136386468,- | |id=chr5:136386450..136386468,- | ||
|ontology_enrichment_celltype=CL:0000540!2.17e-14!33;CL:0000047!2.17e-14!33;CL:0000031!2.17e-14!33;CL:0000404!2.17e-14!33;CL:0000117!2.78e-14!23;CL:0000337!2.78e-14!23;CL:0002319!3.21e-14!43;CL:0000393!7.00e-14!39;CL:0000211!7.00e-14!39;CL:0000221!2.23e-13!44;CL:0000133!2.23e-13!44;CL:0000055!2.93e-13!50;CL:0002321!5.94e-08!70;CL:0000220!5.94e-08!70 | |ontology_enrichment_celltype=CL:0000540!2.17e-14!33;CL:0000047!2.17e-14!33;CL:0000031!2.17e-14!33;CL:0000404!2.17e-14!33;CL:0000117!2.78e-14!23;CL:0000337!2.78e-14!23;CL:0002319!3.21e-14!43;CL:0000393!7.00e-14!39;CL:0000211!7.00e-14!39;CL:0000221!2.23e-13!44;CL:0000133!2.23e-13!44;CL:0000055!2.93e-13!50;CL:0002321!5.94e-08!70;CL:0000220!5.94e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-28,23;CL:0000337,2.93e-28,23;CL:0000540,1.85e-21,33;CL:0000047,1.85e-21,33;CL:0000031,1.85e-21,33;CL:0000404,1.85e-21,33;CL:0000393,7.02e-19,39;CL:0000211,7.02e-19,39;CL:0002319,4.40e-18,43;CL:0000221,1.64e-17,44;CL:0000133,1.64e-17,44;CL:0002321,1.95e-12,70;CL:0000723,1.74e-10,91;CL:0000048,1.74e-10,91;CL:0000034,4.20e-10,97;CL:0002610,8.44e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.08e-24!73;UBERON:0005743!4.08e-24!73;UBERON:0000073!6.37e-24!75;UBERON:0001016!6.37e-24!75;UBERON:0002020!4.04e-18!34;UBERON:0001049!4.50e-18!52;UBERON:0005068!4.50e-18!52;UBERON:0006241!4.50e-18!52;UBERON:0007135!4.50e-18!52;UBERON:0004121!5.42e-18!102;UBERON:0000924!5.42e-18!102;UBERON:0006601!5.42e-18!102;UBERON:0002346!3.82e-17!71;UBERON:0003075!3.82e-17!71;UBERON:0007284!3.82e-17!71;UBERON:0000955!4.62e-17!50;UBERON:0006238!4.62e-17!50;UBERON:0002616!1.43e-16!49;UBERON:0002791!8.09e-15!29;UBERON:0003528!8.09e-15!29;UBERON:0001893!8.09e-15!29;UBERON:0003080!5.99e-14!40;UBERON:0002780!1.58e-13!39;UBERON:0001890!1.58e-13!39;UBERON:0006240!1.58e-13!39;UBERON:0000033!2.41e-12!63;UBERON:0003056!1.45e-11!49;UBERON:0000956!5.95e-11!21;UBERON:0001869!5.95e-11!21;UBERON:0000203!5.95e-11!21;UBERON:0002619!2.46e-09!17;UBERON:0000025!3.85e-08!114;UBERON:0002021!6.53e-08!10;UBERON:0000411!6.53e-08!10;UBERON:0001950!6.53e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.16e-29,73;UBERON:0000073,3.57e-29,54;UBERON:0002020,1.06e-28,34;UBERON:0001016,1.41e-28,75;UBERON:0001049,5.34e-24,52;UBERON:0005068,5.34e-24,52;UBERON:0006241,5.34e-24,52;UBERON:0007135,5.34e-24,52;UBERON:0003528,2.47e-21,29;UBERON:0002791,2.47e-21,29;UBERON:0001893,2.47e-21,29;UBERON:0004121,3.03e-20,95;UBERON:0000924,3.03e-20,95;UBERON:0006601,3.03e-20,95;UBERON:0000955,3.30e-19,47;UBERON:0006238,3.30e-19,47;UBERON:0002346,3.36e-19,64;UBERON:0003075,3.36e-19,64;UBERON:0007284,3.36e-19,64;UBERON:0003080,2.16e-18,40;UBERON:0002616,3.11e-18,46;UBERON:0002780,1.71e-17,39;UBERON:0001890,1.71e-17,39;UBERON:0006240,1.71e-17,39;UBERON:0002021,4.04e-17,10;UBERON:0000411,4.04e-17,10;UBERON:0001950,4.04e-17,10;UBERON:0010371,9.71e-16,73;UBERON:0000956,2.37e-15,21;UBERON:0001869,2.37e-15,21;UBERON:0000203,2.37e-15,21;UBERON:0002619,5.67e-15,17;UBERON:0003056,8.92e-14,49;UBERON:0010314,1.46e-12,92;UBERON:0001948,4.05e-09,5;UBERON:0002315,4.05e-09,5;UBERON:0000025,1.71e-08,114;UBERON:0002240,1.70e-07,6;UBERON:0005174,1.70e-07,6;UBERON:0001137,1.70e-07,6;UBERON:0004111,2.21e-07,122;UBERON:0002950,3.40e-07,4;UBERON:0001891,3.40e-07,4;UBERON:0009616,3.40e-07,4;UBERON:0010286,3.40e-07,4;UBERON:0002420,3.89e-07,8;UBERON:0007245,3.89e-07,8;UBERON:0010009,3.89e-07,8;UBERON:0010011,3.89e-07,8;UBERON:0000454,3.89e-07,8;UBERON:0004684,8.44e-07,3;UBERON:0002275,8.44e-07,3;UBERON:0011216,9.81e-07,194 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0.129123323441576,0.140788722151667,0,0,0.159544317990673,0,0,1.66554880907831,0,0,0,0.137114433605739,0,0.255129870453209,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0.304130793658544,0.917733760808408,0,0.65407546914134,0.439372365468944,0.777719596297134,0.699932108126813,0,0,0,0,1.54355661621568,0.573066879877513,0,1.41621522601718,2.11596391708813,0.633831403506179,0.677689064138264,0,0.449949858640699,4.94433181283487,1.4209602298922,1.19840044207362,2.30530983192933,0.829516898467821,2.43010688997043,1.26194976810829,3.71346279724945,3.97563373712904,1.10241719293459,1.72521847832825,1.83843757322004,15.4162233399144,6.12899222808901,8.29475279583715,2.2420668914133,1.64677758484337,1.04182674111352,5.02529398202486,5.06486349028512,3.81995619442025,8.54422897873636,5.97961059356232,1.3047961207771,0.530083353332288,0.151143120213571,0,0,0,0.539703191637817,1.29955283489534,0.896053774194671,0.702222100658759,0.170430322578058,0.259786004602869,0,0,1.28326477414318,0,0,0,0.253359865475099,2.02209778005913,0.11418387971906,0,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,1.20578112442098,0.352766121407114,0.628332956648377,0.494389935468748,0.289198713839823,0,0.647067399789637,0.662524555381181,0.969750506270444,0,0.292780797011547,1.46612694769419,0,0.239630249011841,0,0,1.04853447583376,0.457500602818626,0.753926112677186,0.695297280769106,1.53429274398198,1.66230435647648,1.29793010454206,0.305518091550949,0,0,0,0.520481771850815,0,0.540186389416048,0.30140963567143,0.0680364991513279,0.2562274405697,0.562210347358373,0,0.215567992932842,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0.329119699826961,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,0.210289948564127,0.720332286654991,0,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0,0.31399745568275,0,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0.648540907100142,0.274561413188081,1.43768206527355,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0.472905432318573,0,0.159454768657487,0.163863314715738,0.345369963731791,0.578596234326046,1.50791283939272,1.63171705145613,0.491764273019036,0,0.481651769963376,1.99259867206745,0.491804836130026,1.00988370881749,0.315508219416257,0.390438744296638,1.29254038639679,1.19484398976276,0.891194696329576,0.566153061577665,0,0.876767573733936,0.790575555893047,1.28528526568723,0.141940085208269,0,0,0,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0.388076051348264,0.857348140126369,0,0.891844088010353,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0,0,0,0.927126510052548,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0.337912250981556,0.117357238645754,0.2604087696879,0.419437377702843,0.724752362478018,0,0,0,0.308132871494482,0.389762468933385,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0,0.194915761479505,0.192423683280659,0,0,0.221985953374065,1.16628013592318,0.167884616364078,0.19318959403219,0,0,0.214368379079066,0,3.95326289831947,3.68260189205742,4.01026859407578,4.46818274093588,5.48066015816514,2.2661816921691,6.07520250208625,3.15224842256954,6.79713613476307,3.62432218226274,0.93408612825759,0,0.341467211508268,0.729320151204882,0.419226325255965,0.551530525350042,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.37456602987953,0.128050304809739,0.574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.735994600671987,1.37147700954166,0.532427418478012,0.476872379894642,0.290692833264657,0.564656282491984,0.507687647350059,0.73171189149109,0.263069711437843,0.407412341537585,1.12228454331548,0.593175090620871,0.591026894253381,0.409231043169689,0.619747364743864,0,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0 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|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0.129123323441576,0.140788722151667,0,0,0.159544317990673,0,0,1.66554880907831,0,0,0,0.137114433605739,0,0.255129870453209,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0.304130793658544,0.917733760808408,0,0.65407546914134,0.439372365468944,0.777719596297134,0.699932108126813,0,0,0,0,1.54355661621568,0.573066879877513,0,1.41621522601718,2.11596391708813,0.633831403506179,0.677689064138264,0,0.449949858640699,4.94433181283487,1.4209602298922,1.19840044207362,2.30530983192933,0.829516898467821,2.43010688997043,1.26194976810829,3.71346279724945,3.97563373712904,1.10241719293459,1.72521847832825,1.83843757322004,15.4162233399144,6.12899222808901,8.29475279583715,2.2420668914133,1.64677758484337,1.04182674111352,5.02529398202486,5.06486349028512,3.81995619442025,8.54422897873636,5.97961059356232,1.3047961207771,0.530083353332288,0.151143120213571,0,0,0,0.539703191637817,1.29955283489534,0.896053774194671,0.702222100658759,0.170430322578058,0.259786004602869,0,0,1.28326477414318,0,0,0,0.253359865475099,2.02209778005913,0.11418387971906,0,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,1.20578112442098,0.352766121407114,0.628332956648377,0.494389935468748,0.289198713839823,0,0.647067399789637,0.662524555381181,0.969750506270444,0,0.292780797011547,1.46612694769419,0,0.239630249011841,0,0,1.04853447583376,0.457500602818626,0.753926112677186,0.695297280769106,1.53429274398198,1.66230435647648,1.29793010454206,0.305518091550949,0,0,0,0.520481771850815,0,0.540186389416048,0.30140963567143,0.0680364991513279,0.2562274405697,0.562210347358373,0,0.215567992932842,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0.329119699826961,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,0.210289948564127,0.720332286654991,0,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0,0.31399745568275,0,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0.287696137450811,0.648540907100142,0.274561413188081,1.43768206527355,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0.339490171550376,0.234690248288502,0,0,0.195133647857799,0.472905432318573,0,0.159454768657487,0.163863314715738,0.345369963731791,0.578596234326046,1.50791283939272,1.63171705145613,0.491764273019036,0,0.481651769963376,1.99259867206745,0.491804836130026,1.00988370881749,0.315508219416257,0.390438744296638,1.29254038639679,1.19484398976276,0.891194696329576,0.566153061577665,0,0.876767573733936,0.790575555893047,1.28528526568723,0.141940085208269,0,0,0,0,0.485561272309963,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0.388076051348264,0.857348140126369,0,0.891844088010353,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0,0,0,0.927126510052548,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0.337912250981556,0.117357238645754,0.2604087696879,0.419437377702843,0.724752362478018,0,0,0,0.308132871494482,0.389762468933385,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0,0.194915761479505,0.192423683280659,0,0,0.221985953374065,1.16628013592318,0.167884616364078,0.19318959403219,0,0,0.214368379079066,0,3.95326289831947,3.68260189205742,4.01026859407578,4.46818274093588,5.48066015816514,2.2661816921691,6.07520250208625,3.15224842256954,6.79713613476307,3.62432218226274,0.93408612825759,0,0.341467211508268,0.729320151204882,0.419226325255965,0.551530525350042,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.37456602987953,0.128050304809739,0.574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.735994600671987,1.37147700954166,0.532427418478012,0.476872379894642,0.290692833264657,0.564656282491984,0.507687647350059,0.73171189149109,0.263069711437843,0.407412341537585,1.12228454331548,0.593175090620871,0.591026894253381,0.409231043169689,0.619747364743864,0,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.441182838239031,0 | ||
|short_description=p@chr5:136386450..136386468,- | |short_description=p@chr5:136386450..136386468,- | ||
}} | }} |
Latest revision as of 19:44, 3 August 2015
Short description: | p@chr5:136386450..136386468, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:136386450..136386468, - |
Coexpression cluster: | MCL_coexpression_mm9:666 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.93e-28 | 23 |
neuroblast (sensu Vertebrata) | 2.93e-28 | 23 |
neuron | 1.85e-21 | 33 |
neuronal stem cell | 1.85e-21 | 33 |
neuroblast | 1.85e-21 | 33 |
electrically signaling cell | 1.85e-21 | 33 |
electrically responsive cell | 7.02e-19 | 39 |
electrically active cell | 7.02e-19 | 39 |
neural cell | 4.40e-18 | 43 |
ectodermal cell | 1.64e-17 | 44 |
neurectodermal cell | 1.64e-17 | 44 |
embryonic cell | 1.95e-12 | 70 |
somatic stem cell | 1.74e-10 | 91 |
multi fate stem cell | 1.74e-10 | 91 |
stem cell | 4.20e-10 | 97 |
raphe nuclei neuron | 8.44e-07 | 3 |