Personal tools

FFCP PHASE1:Mm9::chr17:90435182..90435203,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:90435182..90435203,-
|DHSsupport=NA
|short_description=p@chr17:90435182..90435203,-
|DPIdataset=NA
|description=CAGE_peak_at_chr17:90435182..90435203,-
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=145
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr17:90435182..90435203,-
|description=CAGE_peak_at_chr17:90435182..90435203,-
|id=chr17:90435182..90435203,-
|ontology_enrichment_celltype=CL:0000117!9.78e-16!23;CL:0000337!9.78e-16!23;CL:0000540!1.09e-13!33;CL:0000047!1.09e-13!33;CL:0000031!1.09e-13!33;CL:0000404!1.09e-13!33;CL:0002319!3.82e-10!43;CL:0000393!5.99e-10!39;CL:0000211!5.99e-10!39;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0000055!2.82e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.90e-25,23;CL:0000337,1.90e-25,23;CL:0000540,5.51e-18,33;CL:0000047,5.51e-18,33;CL:0000031,5.51e-18,33;CL:0000404,5.51e-18,33;CL:0000393,2.00e-14,39;CL:0000211,2.00e-14,39;CL:0002319,1.30e-12,43;CL:0000221,3.27e-12,44;CL:0000133,3.27e-12,44;CL:0002610,3.55e-07,3;CL:0002612,5.87e-07,3;CL:0002614,8.03e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.75e-33!71;UBERON:0003075!3.75e-33!71;UBERON:0007284!3.75e-33!71;UBERON:0001017!8.34e-31!73;UBERON:0005743!8.34e-31!73;UBERON:0000955!2.31e-30!50;UBERON:0006238!2.31e-30!50;UBERON:0000073!3.78e-30!75;UBERON:0001016!3.78e-30!75;UBERON:0001049!1.08e-29!52;UBERON:0005068!1.08e-29!52;UBERON:0006241!1.08e-29!52;UBERON:0007135!1.08e-29!52;UBERON:0002616!1.72e-29!49;UBERON:0000033!1.79e-29!63;UBERON:0004121!2.77e-26!102;UBERON:0000924!2.77e-26!102;UBERON:0006601!2.77e-26!102;UBERON:0003056!1.39e-25!49;UBERON:0003080!1.99e-24!40;UBERON:0002780!1.08e-23!39;UBERON:0001890!1.08e-23!39;UBERON:0006240!1.08e-23!39;UBERON:0002020!3.03e-23!34;UBERON:0002791!2.58e-21!29;UBERON:0003528!2.58e-21!29;UBERON:0001893!2.58e-21!29;UBERON:0007811!1.04e-15!86;UBERON:0000956!3.76e-15!21;UBERON:0001869!3.76e-15!21;UBERON:0000203!3.76e-15!21;UBERON:0000153!1.16e-12!94;UBERON:0002619!1.86e-12!17;UBERON:0002021!2.85e-10!10;UBERON:0000411!2.85e-10!10;UBERON:0001950!2.85e-10!10;UBERON:0000025!6.51e-08!114;UBERON:0002420!2.52e-07!8;UBERON:0007245!2.52e-07!8;UBERON:0010009!2.52e-07!8;UBERON:0010011!2.52e-07!8;UBERON:0000454!2.52e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.24e-50,54;UBERON:0001049,7.71e-46,52;UBERON:0005068,7.71e-46,52;UBERON:0006241,7.71e-46,52;UBERON:0007135,7.71e-46,52;UBERON:0001017,3.17e-45,73;UBERON:0001016,9.40e-44,75;UBERON:0000955,1.53e-42,47;UBERON:0006238,1.53e-42,47;UBERON:0002020,2.01e-42,34;UBERON:0002616,7.99e-41,46;UBERON:0003528,8.67e-40,29;UBERON:0002791,8.67e-40,29;UBERON:0001893,8.67e-40,29;UBERON:0002346,1.73e-37,64;UBERON:0003075,1.73e-37,64;UBERON:0007284,1.73e-37,64;UBERON:0003080,8.35e-37,40;UBERON:0002780,2.62e-35,39;UBERON:0001890,2.62e-35,39;UBERON:0006240,2.62e-35,39;UBERON:0004121,1.96e-32,95;UBERON:0000924,1.96e-32,95;UBERON:0006601,1.96e-32,95;UBERON:0010371,1.05e-31,73;UBERON:0003056,1.35e-28,49;UBERON:0000956,1.50e-26,21;UBERON:0001869,1.50e-26,21;UBERON:0000203,1.50e-26,21;UBERON:0010314,3.28e-23,92;UBERON:0002619,9.17e-21,17;UBERON:0002021,1.85e-20,10;UBERON:0000411,1.85e-20,10;UBERON:0001950,1.85e-20,10;UBERON:0000025,7.39e-16,114;UBERON:0004111,3.27e-14,122;UBERON:0002420,4.50e-14,8;UBERON:0007245,4.50e-14,8;UBERON:0010009,4.50e-14,8;UBERON:0010011,4.50e-14,8;UBERON:0000454,4.50e-14,8;UBERON:0011216,1.12e-10,194;UBERON:0003076,5.74e-09,12;UBERON:0003057,5.74e-09,12;UBERON:0000369,7.42e-09,5;UBERON:0002435,7.42e-09,5;UBERON:0000204,7.42e-09,5;UBERON:0010082,7.42e-09,5;UBERON:0002950,3.32e-08,4;UBERON:0001891,3.32e-08,4;UBERON:0009616,3.32e-08,4;UBERON:0010286,3.32e-08,4;UBERON:0000483,7.16e-08,174;UBERON:0000119,1.12e-07,176;UBERON:0004684,3.55e-07,3;UBERON:0002275,3.55e-07,3;UBERON:0002257,5.87e-07,3;UBERON:0002038,8.03e-07,3;UBERON:0009663,8.03e-07,3;UBERON:0009661,8.03e-07,3;UBERON:0000125,8.03e-07,3;UBERON:0002308,8.03e-07,3
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0,0,0,0,0,0,0,0,1.61853168687678,6.34789175126439,0.633831403506179,0,0,0,0,0,0,0,1.65903379693564,2.16009501330705,1.89292465216244,0,0.441737081903227,1.83736198822431,0.958454710182364,1.83843757322004,6.60695285996332,15.3224805702225,18.279177457493,2.1101806036831,3.47653045689157,4.68822033501084,4.74611098302348,9.00420176050688,10.5430790965999,22.3917724959987,9.681274294339,4.65998614563251,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,3.51336956413857,4.81727425670947,0,0.239630249011841,0,0.127070227073065,2.54644086988199,4.11750542536764,3.01570445070875,5.56237824615285,8.69432554923124,5.40248915854856,4.70499662896497,0.203678727700633,0.124406970610093,0,0.631325567659422,0,0,0.180062129805349,0.452114453507145,0.476255494059295,0.896796041993948,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,3.15434922846191,4.52780294468852,0,0,0,0.232236671860439,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0,0,0.469380496577004,0,0.238043640886014,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,1.9266070798535,2.34423373184406,0,0,0.631016438832513,0.780877488593277,1.29254038639679,0,0,0,0,0,0.790575555893047,5.14114106274891,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,1.70219802876894,0.540183282093931,0,0.428674070063185,0.354680467284547,0.891844088010353,0.493647061806363,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0.82554747185289,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0.209088296014469,0.436725127492355,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3310663342144,13.3494318587081,16.0410743763031,35.4017555627996,12.3314853558716,11.3309084608455,8.10027000278167,8.55610286126019,6.79713613476307,19.1571315348173,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.280924522409647,0.192075457214608,0.0574354689556133,1.42888107384922,0.231768651889711,0.38581844092741,0,0.294397840268795,0.685738504770831,1.4198064492747,0.476872379894642,0.145346416632329,0.282328141245992,0.423073039458382,0.182927972872773,0.526139422875686,0.679020569229309,0,0.118635018124174,0.197008964751127,1.22769312950907,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0,0,0,0,0,0,0,0,1.61853168687678,6.34789175126439,0.633831403506179,0,0,0,0,0,0,0,1.65903379693564,2.16009501330705,1.89292465216244,0,0.441737081903227,1.83736198822431,0.958454710182364,1.83843757322004,6.60695285996332,15.3224805702225,18.279177457493,2.1101806036831,3.47653045689157,4.68822033501084,4.74611098302348,9.00420176050688,10.5430790965999,22.3917724959987,9.681274294339,4.65998614563251,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,3.51336956413857,4.81727425670947,0,0.239630249011841,0,0.127070227073065,2.54644086988199,4.11750542536764,3.01570445070875,5.56237824615285,8.69432554923124,5.40248915854856,4.70499662896497,0.203678727700633,0.124406970610093,0,0.631325567659422,0,0,0.180062129805349,0.452114453507145,0.476255494059295,0.896796041993948,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,3.15434922846191,4.52780294468852,0,0,0,0.232236671860439,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0,0,0.469380496577004,0,0.238043640886014,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,1.9266070798535,2.34423373184406,0,0,0.631016438832513,0.780877488593277,1.29254038639679,0,0,0,0,0,0.790575555893047,5.14114106274891,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,1.70219802876894,0.540183282093931,0,0.428674070063185,0.354680467284547,0.891844088010353,0.493647061806363,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0.82554747185289,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0.209088296014469,0.436725127492355,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3310663342144,13.3494318587081,16.0410743763031,35.4017555627996,12.3314853558716,11.3309084608455,8.10027000278167,8.55610286126019,6.79713613476307,19.1571315348173,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.280924522409647,0.192075457214608,0.0574354689556133,1.42888107384922,0.231768651889711,0.38581844092741,0,0.294397840268795,0.685738504770831,1.4198064492747,0.476872379894642,0.145346416632329,0.282328141245992,0.423073039458382,0.182927972872773,0.526139422875686,0.679020569229309,0,0.118635018124174,0.197008964751127,1.22769312950907,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421
|short_description=p@chr17:90435182..90435203,-
}}
}}

Latest revision as of 11:55, 5 August 2015

Short description:p@chr17:90435182..90435203, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr17:90435182..90435203, -
Coexpression cluster:MCL_coexpression_mm9:145
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr17:90435182..90435203-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.54
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D55.56
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.24e-5054
neural tube7.71e-4652
neural rod7.71e-4652
future spinal cord7.71e-4652
neural keel7.71e-4652
central nervous system3.17e-4573
nervous system9.40e-4475
brain1.53e-4247
future brain1.53e-4247
gray matter2.01e-4234
regional part of brain7.99e-4146
brain grey matter8.67e-4029
regional part of telencephalon8.67e-4029
telencephalon8.67e-4029
neurectoderm1.73e-3764
neural plate1.73e-3764
presumptive neural plate1.73e-3764
anterior neural tube8.35e-3740
regional part of forebrain2.62e-3539
forebrain2.62e-3539
future forebrain2.62e-3539
ectoderm-derived structure1.96e-3295
ectoderm1.96e-3295
presumptive ectoderm1.96e-3295
ecto-epithelium1.05e-3173
pre-chordal neural plate1.35e-2849
cerebral cortex1.50e-2621
cerebral hemisphere1.50e-2621
pallium1.50e-2621
structure with developmental contribution from neural crest3.28e-2392
regional part of cerebral cortex9.17e-2117
occipital lobe1.85e-2010
visual cortex1.85e-2010
neocortex1.85e-2010
tube7.39e-16114
anatomical conduit3.27e-14122
basal ganglion4.50e-148
nuclear complex of neuraxis4.50e-148
aggregate regional part of brain4.50e-148
collection of basal ganglia4.50e-148
cerebral subcortex4.50e-148
organ system subdivision1.12e-10194
posterior neural tube5.74e-0912
chordal neural plate5.74e-0912
corpus striatum7.42e-095
striatum7.42e-095
ventral part of telencephalon7.42e-095
future corpus striatum7.42e-095
regional part of midbrain3.32e-084
midbrain3.32e-084
presumptive midbrain3.32e-084
midbrain neural tube3.32e-084
epithelium7.16e-08174
cell layer1.12e-07176
raphe nuclei3.55e-073
reticular formation3.55e-073
ventral horn of spinal cord5.87e-073
substantia nigra8.03e-073
telencephalic nucleus8.03e-073
midbrain nucleus8.03e-073
neural nucleus8.03e-073
nucleus of brain8.03e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:90435182..90435203,-&oldid=3896609"