FFCP PHASE1:Mm9::chr6:30753209..30753228,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:30753209..30753228,+ | |||
|description=CAGE_peak_at_chr6:30753209..30753228,+ | |description=CAGE_peak_at_chr6:30753209..30753228,+ | ||
|id=chr6:30753209..30753228,+ | |id=chr6:30753209..30753228,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.82e-17!23;CL:0000337!9.82e-17!23;CL:0000540!2.81e-09!33;CL:0000047!2.81e-09!33;CL:0000031!2.81e-09!33;CL:0000404!2.81e-09!33;CL:0000393!8.96e-07!39;CL:0000211!8.96e-07!39 | |ontology_enrichment_celltype=CL:0000117!9.82e-17!23;CL:0000337!9.82e-17!23;CL:0000540!2.81e-09!33;CL:0000047!2.81e-09!33;CL:0000031!2.81e-09!33;CL:0000404!2.81e-09!33;CL:0000393!8.96e-07!39;CL:0000211!8.96e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.91e-18,23;CL:0000337,1.91e-18,23;CL:0000540,6.76e-12,33;CL:0000047,6.76e-12,33;CL:0000031,6.76e-12,33;CL:0000404,6.76e-12,33;CL:0000393,1.37e-09,39;CL:0000211,1.37e-09,39;CL:0002610,5.11e-09,3;CL:0002319,2.05e-08,43;CL:0002612,2.08e-08,3;CL:0000221,3.72e-08,44;CL:0000133,3.72e-08,44;CL:0002614,7.99e-08,3;CL:0002613,1.53e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.56e-27!52;UBERON:0005068!8.56e-27!52;UBERON:0006241!8.56e-27!52;UBERON:0007135!8.56e-27!52;UBERON:0002020!2.02e-26!34;UBERON:0002616!1.48e-24!49;UBERON:0000955!9.38e-24!50;UBERON:0006238!9.38e-24!50;UBERON:0002791!5.06e-22!29;UBERON:0003528!5.06e-22!29;UBERON:0001893!5.06e-22!29;UBERON:0002346!6.18e-22!71;UBERON:0003075!6.18e-22!71;UBERON:0007284!6.18e-22!71;UBERON:0001017!9.87e-21!73;UBERON:0005743!9.87e-21!73;UBERON:0000033!1.36e-20!63;UBERON:0003080!2.89e-20!40;UBERON:0000073!1.05e-19!75;UBERON:0001016!1.05e-19!75;UBERON:0003056!2.00e-19!49;UBERON:0002780!2.16e-19!39;UBERON:0001890!2.16e-19!39;UBERON:0006240!2.16e-19!39;UBERON:0000956!5.94e-15!21;UBERON:0001869!5.94e-15!21;UBERON:0000203!5.94e-15!21;UBERON:0004121!9.65e-15!102;UBERON:0000924!9.65e-15!102;UBERON:0006601!9.65e-15!102;UBERON:0002619!4.95e-13!17;UBERON:0007811!1.51e-11!86;UBERON:0000025!2.21e-11!114;UBERON:0002021!4.63e-11!10;UBERON:0000411!4.63e-11!10;UBERON:0001950!4.63e-11!10;UBERON:0000153!5.82e-10!94;UBERON:0004111!1.61e-09!122;UBERON:0002420!2.79e-08!8;UBERON:0007245!2.79e-08!8;UBERON:0010009!2.79e-08!8;UBERON:0010011!2.79e-08!8;UBERON:0000454!2.79e-08!8;UBERON:0003076!4.98e-07!12;UBERON:0003057!4.98e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.79e-34,34;UBERON:0000073,5.46e-31,54;UBERON:0003528,5.06e-27,29;UBERON:0002791,5.06e-27,29;UBERON:0001893,5.06e-27,29;UBERON:0001049,5.17e-27,52;UBERON:0005068,5.17e-27,52;UBERON:0006241,5.17e-27,52;UBERON:0007135,5.17e-27,52;UBERON:0001017,4.39e-25,73;UBERON:0002021,1.29e-24,10;UBERON:0000411,1.29e-24,10;UBERON:0001950,1.29e-24,10;UBERON:0001016,3.06e-24,75;UBERON:0002346,7.75e-21,64;UBERON:0003075,7.75e-21,64;UBERON:0007284,7.75e-21,64;UBERON:0003080,1.55e-20,40;UBERON:0002616,4.23e-19,46;UBERON:0002780,6.13e-19,39;UBERON:0001890,6.13e-19,39;UBERON:0006240,6.13e-19,39;UBERON:0000955,1.37e-18,47;UBERON:0006238,1.37e-18,47;UBERON:0002420,7.31e-18,8;UBERON:0007245,7.31e-18,8;UBERON:0010009,7.31e-18,8;UBERON:0010011,7.31e-18,8;UBERON:0000454,7.31e-18,8;UBERON:0004121,9.30e-18,95;UBERON:0000924,9.30e-18,95;UBERON:0006601,9.30e-18,95;UBERON:0010371,1.54e-17,73;UBERON:0002619,1.89e-16,17;UBERON:0003056,6.67e-16,49;UBERON:0000956,7.31e-13,21;UBERON:0001869,7.31e-13,21;UBERON:0000203,7.31e-13,21;UBERON:0010314,1.07e-12,92;UBERON:0000369,1.25e-11,5;UBERON:0002435,1.25e-11,5;UBERON:0000204,1.25e-11,5;UBERON:0010082,1.25e-11,5;UBERON:0000025,3.22e-11,114;UBERON:0002240,1.14e-10,6;UBERON:0005174,1.14e-10,6;UBERON:0001137,1.14e-10,6;UBERON:0004111,4.49e-10,122;UBERON:0002950,7.01e-10,4;UBERON:0001891,7.01e-10,4;UBERON:0009616,7.01e-10,4;UBERON:0010286,7.01e-10,4;UBERON:0004684,5.11e-09,3;UBERON:0002275,5.11e-09,3;UBERON:0001948,1.76e-08,5;UBERON:0002315,1.76e-08,5;UBERON:0002257,2.08e-08,3;UBERON:0002038,7.99e-08,3;UBERON:0009663,7.99e-08,3;UBERON:0009661,7.99e-08,3;UBERON:0000125,7.99e-08,3;UBERON:0002308,7.99e-08,3;UBERON:0003076,5.72e-07,12;UBERON:0003057,5.72e-07,12;UBERON:0011216,9.76e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,0,0,0,0,0,0,0,0,0.622137673850866,0.135005938331691,0.210324961351382,2.85650984403804,0.220868540951614,0.489963196859816,0.191690942036473,0.919218786610021,5.50579404996943,8.04430229936683,10.4452442614246,1.97829431595291,2.47016637726506,1.04182674111352,1.11673199600552,1.12552522006336,9.93188610549266,15.3206864446307,6.40672563595963,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0.251333182659351,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,2.09706895166752,1.37250180845588,2.38743269014442,0.869121600961382,3.06858548796397,0.20778804455956,0.811206315338788,0.305518091550949,0,0,0,0,0,0,0.452114453507145,0.0680364991513279,0.384341160854549,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0.658239399653922,0,0.162137619091711,0,0,0,0.420579897128254,2.16099685996497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,7.18841032636773,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.390267295715598,0.157635144106191,1.7717175171902,0.637819074629948,0.163863314715738,0,0,0,0,0,0,0.963303539926752,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,3.22227665555024,8.02053718815155,6.8741272937475,4.11049511862385,9.06472676867641,1.35004500046361,2.70192721934532,2.26571204492102,8.28416498802912,0.103787347584177,0.798049746802062,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0,0,0,0,0.188626341386076,0.561849044819294,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0.824171801606613,0.147198920134397,1.02860775715625,1.06485483695602,0.476872379894642,0.581385666529314,0,0.338458431566706,0.365855945745545,1.31534855718921,0.407412341537585,0,0.118635018124174,1.28055827088233,0.409231043169689,0.619747364743864,0.385813221962283,0.499621155875892,0.467863216890817,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,0,0,0,0,0,0,0,0,0.622137673850866,0.135005938331691,0.210324961351382,2.85650984403804,0.220868540951614,0.489963196859816,0.191690942036473,0.919218786610021,5.50579404996943,8.04430229936683,10.4452442614246,1.97829431595291,2.47016637726506,1.04182674111352,1.11673199600552,1.12552522006336,9.93188610549266,15.3206864446307,6.40672563595963,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0.251333182659351,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,2.09706895166752,1.37250180845588,2.38743269014442,0.869121600961382,3.06858548796397,0.20778804455956,0.811206315338788,0.305518091550949,0,0,0,0,0,0,0.452114453507145,0.0680364991513279,0.384341160854549,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0.658239399653922,0,0.162137619091711,0,0,0,0.420579897128254,2.16099685996497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,7.18841032636773,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.390267295715598,0.157635144106191,1.7717175171902,0.637819074629948,0.163863314715738,0,0,0,0,0,0,0.963303539926752,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,3.22227665555024,8.02053718815155,6.8741272937475,4.11049511862385,9.06472676867641,1.35004500046361,2.70192721934532,2.26571204492102,8.28416498802912,0.103787347584177,0.798049746802062,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0,0,0,0,0.188626341386076,0.561849044819294,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0.824171801606613,0.147198920134397,1.02860775715625,1.06485483695602,0.476872379894642,0.581385666529314,0,0.338458431566706,0.365855945745545,1.31534855718921,0.407412341537585,0,0.118635018124174,1.28055827088233,0.409231043169689,0.619747364743864,0.385813221962283,0.499621155875892,0.467863216890817,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p@chr6:30753209..30753228,+ | |short_description=p@chr6:30753209..30753228,+ | ||
}} | }} |
Latest revision as of 13:44, 5 August 2015
Short description: | p@chr6:30753209..30753228, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:30753209..30753228, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.91e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.91e-18 | 23 |
neuron | 6.76e-12 | 33 |
neuronal stem cell | 6.76e-12 | 33 |
neuroblast | 6.76e-12 | 33 |
electrically signaling cell | 6.76e-12 | 33 |
electrically responsive cell | 1.37e-09 | 39 |
electrically active cell | 1.37e-09 | 39 |
raphe nuclei neuron | 5.11e-09 | 3 |
neural cell | 2.05e-08 | 43 |
neuron of the ventral spinal cord | 2.08e-08 | 3 |
ectodermal cell | 3.72e-08 | 44 |
neurectodermal cell | 3.72e-08 | 44 |
neuron of the substantia nigra | 7.99e-08 | 3 |
striatum neuron | 1.53e-07 | 3 |