FFCP PHASE1:Mm9::chr4:57003178..57003201,-: Difference between revisions
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{{FFCP|EntrezGene=230235|HGNC=|MCL_coexpression_id=39|UniProt=B1AXV0,A3KMM1,Q8BVG0|association_with_transcript=61bp_to_ENSMUST00000053681,NM_001142965,uc008sxx.2,uc012den.1_5end|description=CAGE_peak_2_at_6430704M03Rik_5end|id=chr4:57003178..57003201,-|ontology_enrichment_celltype=CL:0000117!1.48e-14!23;CL:0000337!1.48e-14!23;CL:0000540!3.75e-09!33;CL:0000047!3.75e-09!33;CL:0000031!3.75e-09!33;CL:0000404!3.75e-09!33;CL:0000221!6.58e-08!44;CL:0000133!6.58e-08!44;CL:0002319!9.19e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.82e-24,23;CL:0000337,2.82e-24,23;CL:0000540,1.39e-15,33;CL:0000047,1.39e-15,33;CL:0000031,1.39e-15,33;CL:0000404,1.39e-15,33;CL:0000393,1.60e-12,39;CL:0000211,1.60e-12,39;CL:0002319,2.55e-12,43;CL:0000221,6.15e-12,44;CL:0000133,6.15e-12,44;CL:0002610,7.83e-08,3;CL:0002614,4.20e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.33e-25!73;UBERON:0005743!2.33e-25!73;UBERON:0001049!3.23e-25!52;UBERON:0005068!3.23e-25!52;UBERON:0006241!3.23e-25!52;UBERON:0007135!3.23e-25!52;UBERON:0000033!5.28e-25!63;UBERON:0000073!4.55e-24!75;UBERON:0001016!4.55e-24!75;UBERON:0000955!5.08e-24!50;UBERON:0006238!5.08e-24!50;UBERON:0002616!3.34e-23!49;UBERON:0002346!1.36e-20!71;UBERON:0003075!1.36e-20!71;UBERON:0007284!1.36e-20!71;UBERON:0003056!1.30e-19!49;UBERON:0002020!4.58e-19!34;UBERON:0004121!5.92e-19!102;UBERON:0000924!5.92e-19!102;UBERON:0006601!5.92e-19!102;UBERON:0003080!1.58e-17!40;UBERON:0002780!1.08e-16!39;UBERON:0001890!1.08e-16!39;UBERON:0006240!1.08e-16!39;UBERON:0002791!2.17e-15!29;UBERON:0003528!2.17e-15!29;UBERON:0001893!2.17e-15!29;UBERON:0007811!4.79e-14!86;UBERON:0000153!1.71e-13!94;UBERON:0000956!8.87e-10!21;UBERON:0001869!8.87e-10!21;UBERON:0000203!8.87e-10!21;UBERON:0003076!2.38e-08!12;UBERON:0003057!2.38e-08!12;UBERON:0002619!2.11e-07!17;UBERON:0002021!2.89e-07!10;UBERON:0000411!2.89e-07!10;UBERON:0001950!2.89e-07!10;UBERON:0002420!4.00e-07!8;UBERON:0007245!4.00e-07!8;UBERON:0010009!4.00e-07!8;UBERON:0010011!4.00e-07!8;UBERON:0000454!4.00e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.79e-44,54;UBERON:0001017,2.30e-43,73;UBERON:0001016,5.61e-42,75;UBERON:0001049,4.05e-40,52;UBERON:0005068,4.05e-40,52;UBERON:0006241,4.05e-40,52;UBERON:0007135,4.05e-40,52;UBERON:0002020,7.44e-35,34;UBERON:0000955,8.27e-32,47;UBERON:0006238,8.27e-32,47;UBERON:0004121,2.63e-31,95;UBERON:0000924,2.63e-31,95;UBERON:0006601,2.63e-31,95;UBERON:0002346,4.26e-31,64;UBERON:0003075,4.26e-31,64;UBERON:0007284,4.26e-31,64;UBERON:0002616,3.70e-30,46;UBERON:0003528,1.43e-26,29;UBERON:0002791,1.43e-26,29;UBERON:0001893,1.43e-26,29;UBERON:0010371,2.83e-26,73;UBERON:0003080,1.29e-24,40;UBERON:0002780,6.26e-23,39;UBERON:0001890,6.26e-23,39;UBERON:0006240,6.26e-23,39;UBERON:0010314,3.41e-19,92;UBERON:0003056,5.53e-19,49;UBERON:0003076,2.39e-16,12;UBERON:0003057,2.39e-16,12;UBERON:0002021,7.51e-16,10;UBERON:0000411,7.51e-16,10;UBERON:0001950,7.51e-16,10;UBERON:0002420,1.08e-14,8;UBERON:0007245,1.08e-14,8;UBERON:0010009,1.08e-14,8;UBERON:0010011,1.08e-14,8;UBERON:0000454,1.08e-14,8;UBERON:0000956,2.66e-14,21;UBERON:0001869,2.66e-14,21;UBERON:0000203,2.66e-14,21;UBERON:0000025,6.03e-14,114;UBERON:0002619,5.02e-13,17;UBERON:0004111,1.65e-12,122;UBERON:0002240,8.84e-12,6;UBERON:0005174,8.84e-12,6;UBERON:0001137,8.84e-12,6;UBERON:0011216,9.02e-11,194;UBERON:0001948,9.31e-10,5;UBERON:0002315,9.31e-10,5;UBERON:0000369,3.35e-09,5;UBERON:0002435,3.35e-09,5;UBERON:0000204,3.35e-09,5;UBERON:0010082,3.35e-09,5;UBERON:0002950,4.23e-09,4;UBERON:0001891,4.23e-09,4;UBERON:0009616,4.23e-09,4;UBERON:0010286,4.23e-09,4;UBERON:0004684,7.83e-08,3;UBERON:0002275,7.83e-08,3;UBERON:0002038,4.20e-07,3;UBERON:0009663,4.20e-07,3;UBERON:0009661,4.20e-07,3;UBERON:0000125,4.20e-07,3;UBERON:0002308,4.20e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,2.42779753031517,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0.384218305321555,1.55534418462716,0.810035629990144,0.420649922702764,2.85650984403804,2.87129103237098,0.244981598429908,0.0958454710182364,0,8.8092704799511,10.5980490610706,7.83393319606842,1.84640802822271,1.37231465403614,3.64639359389732,5.862842979029,3.93933827022176,6.57032465440283,3.53554302568401,3.55929201997757,3.54158947068071,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5441213698891,27.4375185925626,0,0,0,0,7.9389038884556,3.20250421973039,1.63350657746724,8.69121600961382,10.7400492078739,9.14267396062064,5.84068547043927,0,0,0,0.210441855886474,0.390361328888111,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0,0.562210347358373,0.517406741478031,0,0,0.351902248327898,0.43839146485515,0.556094498451196,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,9.46304768538573,1.85228302282712,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0.704070744865506,0.335012514883631,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,6.42202359951168,7.14991288212439,0,0,0,0,0,0,0,0,0,0,0.395287777946524,4.81981974632711,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0.428674070063185,0.354680467284547,0.356737635204141,0.493647061806363,0,0,0,0,0,0,0.120625849856312,0,0,0,8.52956389248344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,5.64751842617067,1.84130094602871,2.29158205375759,5.32744865265431,7.53590771747707,0,8.10027000278167,4.95353323546643,9.06284817968409,4.65984280576638,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.512201219238954,0.459483751644906,0,0.115884325944855,0.38581844092741,0.824171801606613,0,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0.711810108745045,0.394017929502254,0.818462086339379,0.77468420592983,0.192906610981141,0.249810577937946,0.935726433781634,0.214871054048298,0,0.661774257358546,0|short_description=p2@6430704M03Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:230235 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B1AXV0,uniprot:A3KMM1,uniprot:Q8BVG0 | |||
|association_with_transcript=61bp_to_ENSMUST00000053681,NM_001142965,uc008sxx.2,uc012den.1_5end | |||
|cluster_id=chr4:57003178..57003201,- | |||
|description=CAGE_peak_2_at_6430704M03Rik_5end | |||
|id=chr4:57003178..57003201,- | |||
|ontology_enrichment_celltype=CL:0000117!1.48e-14!23;CL:0000337!1.48e-14!23;CL:0000540!3.75e-09!33;CL:0000047!3.75e-09!33;CL:0000031!3.75e-09!33;CL:0000404!3.75e-09!33;CL:0000221!6.58e-08!44;CL:0000133!6.58e-08!44;CL:0002319!9.19e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.82e-24,23;CL:0000337,2.82e-24,23;CL:0000540,1.39e-15,33;CL:0000047,1.39e-15,33;CL:0000031,1.39e-15,33;CL:0000404,1.39e-15,33;CL:0000393,1.60e-12,39;CL:0000211,1.60e-12,39;CL:0002319,2.55e-12,43;CL:0000221,6.15e-12,44;CL:0000133,6.15e-12,44;CL:0002610,7.83e-08,3;CL:0002614,4.20e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.33e-25!73;UBERON:0005743!2.33e-25!73;UBERON:0001049!3.23e-25!52;UBERON:0005068!3.23e-25!52;UBERON:0006241!3.23e-25!52;UBERON:0007135!3.23e-25!52;UBERON:0000033!5.28e-25!63;UBERON:0000073!4.55e-24!75;UBERON:0001016!4.55e-24!75;UBERON:0000955!5.08e-24!50;UBERON:0006238!5.08e-24!50;UBERON:0002616!3.34e-23!49;UBERON:0002346!1.36e-20!71;UBERON:0003075!1.36e-20!71;UBERON:0007284!1.36e-20!71;UBERON:0003056!1.30e-19!49;UBERON:0002020!4.58e-19!34;UBERON:0004121!5.92e-19!102;UBERON:0000924!5.92e-19!102;UBERON:0006601!5.92e-19!102;UBERON:0003080!1.58e-17!40;UBERON:0002780!1.08e-16!39;UBERON:0001890!1.08e-16!39;UBERON:0006240!1.08e-16!39;UBERON:0002791!2.17e-15!29;UBERON:0003528!2.17e-15!29;UBERON:0001893!2.17e-15!29;UBERON:0007811!4.79e-14!86;UBERON:0000153!1.71e-13!94;UBERON:0000956!8.87e-10!21;UBERON:0001869!8.87e-10!21;UBERON:0000203!8.87e-10!21;UBERON:0003076!2.38e-08!12;UBERON:0003057!2.38e-08!12;UBERON:0002619!2.11e-07!17;UBERON:0002021!2.89e-07!10;UBERON:0000411!2.89e-07!10;UBERON:0001950!2.89e-07!10;UBERON:0002420!4.00e-07!8;UBERON:0007245!4.00e-07!8;UBERON:0010009!4.00e-07!8;UBERON:0010011!4.00e-07!8;UBERON:0000454!4.00e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.79e-44,54;UBERON:0001017,2.30e-43,73;UBERON:0001016,5.61e-42,75;UBERON:0001049,4.05e-40,52;UBERON:0005068,4.05e-40,52;UBERON:0006241,4.05e-40,52;UBERON:0007135,4.05e-40,52;UBERON:0002020,7.44e-35,34;UBERON:0000955,8.27e-32,47;UBERON:0006238,8.27e-32,47;UBERON:0004121,2.63e-31,95;UBERON:0000924,2.63e-31,95;UBERON:0006601,2.63e-31,95;UBERON:0002346,4.26e-31,64;UBERON:0003075,4.26e-31,64;UBERON:0007284,4.26e-31,64;UBERON:0002616,3.70e-30,46;UBERON:0003528,1.43e-26,29;UBERON:0002791,1.43e-26,29;UBERON:0001893,1.43e-26,29;UBERON:0010371,2.83e-26,73;UBERON:0003080,1.29e-24,40;UBERON:0002780,6.26e-23,39;UBERON:0001890,6.26e-23,39;UBERON:0006240,6.26e-23,39;UBERON:0010314,3.41e-19,92;UBERON:0003056,5.53e-19,49;UBERON:0003076,2.39e-16,12;UBERON:0003057,2.39e-16,12;UBERON:0002021,7.51e-16,10;UBERON:0000411,7.51e-16,10;UBERON:0001950,7.51e-16,10;UBERON:0002420,1.08e-14,8;UBERON:0007245,1.08e-14,8;UBERON:0010009,1.08e-14,8;UBERON:0010011,1.08e-14,8;UBERON:0000454,1.08e-14,8;UBERON:0000956,2.66e-14,21;UBERON:0001869,2.66e-14,21;UBERON:0000203,2.66e-14,21;UBERON:0000025,6.03e-14,114;UBERON:0002619,5.02e-13,17;UBERON:0004111,1.65e-12,122;UBERON:0002240,8.84e-12,6;UBERON:0005174,8.84e-12,6;UBERON:0001137,8.84e-12,6;UBERON:0011216,9.02e-11,194;UBERON:0001948,9.31e-10,5;UBERON:0002315,9.31e-10,5;UBERON:0000369,3.35e-09,5;UBERON:0002435,3.35e-09,5;UBERON:0000204,3.35e-09,5;UBERON:0010082,3.35e-09,5;UBERON:0002950,4.23e-09,4;UBERON:0001891,4.23e-09,4;UBERON:0009616,4.23e-09,4;UBERON:0010286,4.23e-09,4;UBERON:0004684,7.83e-08,3;UBERON:0002275,7.83e-08,3;UBERON:0002038,4.20e-07,3;UBERON:0009663,4.20e-07,3;UBERON:0009661,4.20e-07,3;UBERON:0000125,4.20e-07,3;UBERON:0002308,4.20e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,2.42779753031517,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0.384218305321555,1.55534418462716,0.810035629990144,0.420649922702764,2.85650984403804,2.87129103237098,0.244981598429908,0.0958454710182364,0,8.8092704799511,10.5980490610706,7.83393319606842,1.84640802822271,1.37231465403614,3.64639359389732,5.862842979029,3.93933827022176,6.57032465440283,3.53554302568401,3.55929201997757,3.54158947068071,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5441213698891,27.4375185925626,0,0,0,0,7.9389038884556,3.20250421973039,1.63350657746724,8.69121600961382,10.7400492078739,9.14267396062064,5.84068547043927,0,0,0,0.210441855886474,0.390361328888111,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0,0.562210347358373,0.517406741478031,0,0,0.351902248327898,0.43839146485515,0.556094498451196,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,9.46304768538573,1.85228302282712,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0.704070744865506,0.335012514883631,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,6.42202359951168,7.14991288212439,0,0,0,0,0,0,0,0,0,0,0.395287777946524,4.81981974632711,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0.428674070063185,0.354680467284547,0.356737635204141,0.493647061806363,0,0,0,0,0,0,0.120625849856312,0,0,0,8.52956389248344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,5.64751842617067,1.84130094602871,2.29158205375759,5.32744865265431,7.53590771747707,0,8.10027000278167,4.95353323546643,9.06284817968409,4.65984280576638,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.512201219238954,0.459483751644906,0,0.115884325944855,0.38581844092741,0.824171801606613,0,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0.711810108745045,0.394017929502254,0.818462086339379,0.77468420592983,0.192906610981141,0.249810577937946,0.935726433781634,0.214871054048298,0,0.661774257358546,0 | |||
|short_description=p2@6430704M03Rik | |||
}} |
Revision as of 14:53, 5 August 2015
Short description: | p2@6430704M03Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_6430704M03Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 61bp_to_ENSMUST00000053681, NM_001142965, uc008sxx.2, uc012den.1_5end |
EntrezGene: | 230235 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.82e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.82e-24 | 23 |
neuron | 1.39e-15 | 33 |
neuronal stem cell | 1.39e-15 | 33 |
neuroblast | 1.39e-15 | 33 |
electrically signaling cell | 1.39e-15 | 33 |
electrically responsive cell | 1.60e-12 | 39 |
electrically active cell | 1.60e-12 | 39 |
neural cell | 2.55e-12 | 43 |
ectodermal cell | 6.15e-12 | 44 |
neurectodermal cell | 6.15e-12 | 44 |
raphe nuclei neuron | 7.83e-08 | 3 |
neuron of the substantia nigra | 4.20e-07 | 3 |