FFCP PHASE1:Mm9::chr13:58909624..58909647,+: Difference between revisions
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{{FFCP|EntrezGene=18212|HGNC=|MCL_coexpression_id=283|UniProt=|association_with_transcript=0bp_to_uc007quk.1_5end|description=CAGE_peak_6_at_Ntrk2_5end|id=chr13:58909624..58909647,+|ontology_enrichment_celltype=CL:0000117!7.76e-13!23;CL:0000337!7.76e-13!23;CL:0002319!4.46e-11!43;CL:0000221!1.70e-10!44;CL:0000133!1.70e-10!44;CL:0000055!1.32e-07!50;CL:0002453!9.10e-07!8|ontology_enrichment_celltype_v019_2=CL:0000117,2.69e-14,23;CL:0000337,2.69e-14,23;CL:0002319,3.47e-14,43;CL:0000221,1.06e-13,44;CL:0000133,1.06e-13,44;CL:0002453,1.09e-09,8;CL:0000540,1.48e-08,33;CL:0000047,1.48e-08,33;CL:0000031,1.48e-08,33;CL:0000404,1.48e-08,33;CL:0000333,1.93e-07,10;CL:0000095,1.93e-07,10;CL:0000243,1.93e-07,10;CL:0000123,1.93e-07,10;CL:0000125,1.93e-07,10;CL:0000030,1.93e-07,10;CL:0000339,1.93e-07,10;CL:0000128,7.30e-07,6;CL:0000126,7.30e-07,6;CL:0000127,7.30e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.12e-30!52;UBERON:0005068!2.12e-30!52;UBERON:0006241!2.12e-30!52;UBERON:0007135!2.12e-30!52;UBERON:0000073!3.00e-30!75;UBERON:0001016!3.00e-30!75;UBERON:0001017!3.88e-30!73;UBERON:0005743!3.88e-30!73;UBERON:0000955!7.47e-30!50;UBERON:0006238!7.47e-30!50;UBERON:0002616!6.07e-29!49;UBERON:0004121!3.51e-28!102;UBERON:0000924!3.51e-28!102;UBERON:0006601!3.51e-28!102;UBERON:0000033!6.85e-28!63;UBERON:0002346!2.73e-25!71;UBERON:0003075!2.73e-25!71;UBERON:0007284!2.73e-25!71;UBERON:0003080!2.04e-22!40;UBERON:0003056!9.43e-22!49;UBERON:0002780!1.31e-21!39;UBERON:0001890!1.31e-21!39;UBERON:0006240!1.31e-21!39;UBERON:0002020!2.03e-20!34;UBERON:0002791!2.53e-17!29;UBERON:0003528!2.53e-17!29;UBERON:0001893!2.53e-17!29;UBERON:0007811!7.05e-17!86;UBERON:0000153!1.09e-15!94;UBERON:0000956!9.00e-13!21;UBERON:0001869!9.00e-13!21;UBERON:0000203!9.00e-13!21;UBERON:0002619!1.36e-11!17;UBERON:0003076!2.56e-08!12;UBERON:0003057!2.56e-08!12;UBERON:0000025!2.65e-08!114;UBERON:0004111!6.62e-08!122;UBERON:0002021!9.05e-08!10;UBERON:0000411!9.05e-08!10;UBERON:0001950!9.05e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.60e-45,73;UBERON:0000073,8.64e-44,54;UBERON:0001016,2.87e-43,75;UBERON:0001049,2.58e-40,52;UBERON:0005068,2.58e-40,52;UBERON:0006241,2.58e-40,52;UBERON:0007135,2.58e-40,52;UBERON:0004121,2.10e-35,95;UBERON:0000924,2.10e-35,95;UBERON:0006601,2.10e-35,95;UBERON:0000955,1.54e-34,47;UBERON:0006238,1.54e-34,47;UBERON:0002346,1.26e-33,64;UBERON:0003075,1.26e-33,64;UBERON:0007284,1.26e-33,64;UBERON:0002616,5.44e-33,46;UBERON:0002020,1.98e-29,34;UBERON:0010371,6.24e-28,73;UBERON:0003080,1.41e-27,40;UBERON:0002780,3.56e-26,39;UBERON:0001890,3.56e-26,39;UBERON:0006240,3.56e-26,39;UBERON:0003056,1.01e-23,49;UBERON:0003528,1.17e-23,29;UBERON:0002791,1.17e-23,29;UBERON:0001893,1.17e-23,29;UBERON:0010314,9.90e-21,92;UBERON:0002619,7.41e-19,17;UBERON:0000956,1.37e-16,21;UBERON:0001869,1.37e-16,21;UBERON:0000203,1.37e-16,21;UBERON:0000025,3.07e-15,114;UBERON:0004111,2.85e-14,122;UBERON:0002021,1.44e-13,10;UBERON:0000411,1.44e-13,10;UBERON:0001950,1.44e-13,10;UBERON:0003076,8.81e-13,12;UBERON:0003057,8.81e-13,12;UBERON:0011216,5.13e-12,194;UBERON:0002420,3.44e-08,8;UBERON:0007245,3.44e-08,8;UBERON:0010009,3.44e-08,8;UBERON:0010011,3.44e-08,8;UBERON:0000454,3.44e-08,8;UBERON:0002240,4.19e-08,6;UBERON:0005174,4.19e-08,6;UBERON:0001137,4.19e-08,6;UBERON:0002950,1.83e-07,4;UBERON:0001891,1.83e-07,4;UBERON:0009616,1.83e-07,4;UBERON:0010286,1.83e-07,4;UBERON:0001948,5.73e-07,5;UBERON:0002315,5.73e-07,5;UBERON:0000483,6.75e-07,174;UBERON:0001954,6.96e-07,7;UBERON:0003022,6.96e-07,7;UBERON:0002421,6.96e-07,7;UBERON:0000349,6.96e-07,7;UBERON:0002600,6.96e-07,7|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,16.5699118849139,10.5449367712546,15.1655321277941,9.09911740564856,5.75010257459886,0,0,0,0,0,0,0.606949382578793,2.11596391708813,1.90149421051854,0,0,0,0.988866362566974,0,9.28760342607055,34.9638657842615,0.829516898467821,0.270011876663381,0.841299845405528,3.71346279724945,7.50953039235486,1.71487118900936,2.01275489138296,0.919218786610021,19.82085857989,16.2162919368188,13.5173749265494,1.18697658957174,1.09785172322892,0.52091337055676,15.9134309430787,11.8180148106653,21.8501494320838,4.41942878210502,4.8406371471695,2.79599168737951,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.376999773989026,0.247194967734374,1.87979163995885,0,0,0,0,0,4.68449275218475,3.35114730901528,0,0,0,0,12.8819949888148,6.8625090422794,2.1361239859187,9.03886464999838,7.67146371990992,12.6750707181332,10.3834408363365,0.509196819251581,0.373220911830279,0,1.05220927943237,0,0,0.360124259610698,0.30140963567143,0.0680364991513279,0.640568601424249,0.655912071918102,1.29351685369508,0.215567992932842,0,0,0,0.278047249225598,1.0447564995665,0.2057821364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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18212 | |||
|HGNC= | |||
|MCL_coexpression_id=283 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc007quk.1_5end | |||
|cluster_id=chr13:58909624..58909647,+ | |||
|description=CAGE_peak_6_at_Ntrk2_5end | |||
|id=chr13:58909624..58909647,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.76e-13!23;CL:0000337!7.76e-13!23;CL:0002319!4.46e-11!43;CL:0000221!1.70e-10!44;CL:0000133!1.70e-10!44;CL:0000055!1.32e-07!50;CL:0002453!9.10e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.69e-14,23;CL:0000337,2.69e-14,23;CL:0002319,3.47e-14,43;CL:0000221,1.06e-13,44;CL:0000133,1.06e-13,44;CL:0002453,1.09e-09,8;CL:0000540,1.48e-08,33;CL:0000047,1.48e-08,33;CL:0000031,1.48e-08,33;CL:0000404,1.48e-08,33;CL:0000333,1.93e-07,10;CL:0000095,1.93e-07,10;CL:0000243,1.93e-07,10;CL:0000123,1.93e-07,10;CL:0000125,1.93e-07,10;CL:0000030,1.93e-07,10;CL:0000339,1.93e-07,10;CL:0000128,7.30e-07,6;CL:0000126,7.30e-07,6;CL:0000127,7.30e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.12e-30!52;UBERON:0005068!2.12e-30!52;UBERON:0006241!2.12e-30!52;UBERON:0007135!2.12e-30!52;UBERON:0000073!3.00e-30!75;UBERON:0001016!3.00e-30!75;UBERON:0001017!3.88e-30!73;UBERON:0005743!3.88e-30!73;UBERON:0000955!7.47e-30!50;UBERON:0006238!7.47e-30!50;UBERON:0002616!6.07e-29!49;UBERON:0004121!3.51e-28!102;UBERON:0000924!3.51e-28!102;UBERON:0006601!3.51e-28!102;UBERON:0000033!6.85e-28!63;UBERON:0002346!2.73e-25!71;UBERON:0003075!2.73e-25!71;UBERON:0007284!2.73e-25!71;UBERON:0003080!2.04e-22!40;UBERON:0003056!9.43e-22!49;UBERON:0002780!1.31e-21!39;UBERON:0001890!1.31e-21!39;UBERON:0006240!1.31e-21!39;UBERON:0002020!2.03e-20!34;UBERON:0002791!2.53e-17!29;UBERON:0003528!2.53e-17!29;UBERON:0001893!2.53e-17!29;UBERON:0007811!7.05e-17!86;UBERON:0000153!1.09e-15!94;UBERON:0000956!9.00e-13!21;UBERON:0001869!9.00e-13!21;UBERON:0000203!9.00e-13!21;UBERON:0002619!1.36e-11!17;UBERON:0003076!2.56e-08!12;UBERON:0003057!2.56e-08!12;UBERON:0000025!2.65e-08!114;UBERON:0004111!6.62e-08!122;UBERON:0002021!9.05e-08!10;UBERON:0000411!9.05e-08!10;UBERON:0001950!9.05e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.60e-45,73;UBERON:0000073,8.64e-44,54;UBERON:0001016,2.87e-43,75;UBERON:0001049,2.58e-40,52;UBERON:0005068,2.58e-40,52;UBERON:0006241,2.58e-40,52;UBERON:0007135,2.58e-40,52;UBERON:0004121,2.10e-35,95;UBERON:0000924,2.10e-35,95;UBERON:0006601,2.10e-35,95;UBERON:0000955,1.54e-34,47;UBERON:0006238,1.54e-34,47;UBERON:0002346,1.26e-33,64;UBERON:0003075,1.26e-33,64;UBERON:0007284,1.26e-33,64;UBERON:0002616,5.44e-33,46;UBERON:0002020,1.98e-29,34;UBERON:0010371,6.24e-28,73;UBERON:0003080,1.41e-27,40;UBERON:0002780,3.56e-26,39;UBERON:0001890,3.56e-26,39;UBERON:0006240,3.56e-26,39;UBERON:0003056,1.01e-23,49;UBERON:0003528,1.17e-23,29;UBERON:0002791,1.17e-23,29;UBERON:0001893,1.17e-23,29;UBERON:0010314,9.90e-21,92;UBERON:0002619,7.41e-19,17;UBERON:0000956,1.37e-16,21;UBERON:0001869,1.37e-16,21;UBERON:0000203,1.37e-16,21;UBERON:0000025,3.07e-15,114;UBERON:0004111,2.85e-14,122;UBERON:0002021,1.44e-13,10;UBERON:0000411,1.44e-13,10;UBERON:0001950,1.44e-13,10;UBERON:0003076,8.81e-13,12;UBERON:0003057,8.81e-13,12;UBERON:0011216,5.13e-12,194;UBERON:0002420,3.44e-08,8;UBERON:0007245,3.44e-08,8;UBERON:0010009,3.44e-08,8;UBERON:0010011,3.44e-08,8;UBERON:0000454,3.44e-08,8;UBERON:0002240,4.19e-08,6;UBERON:0005174,4.19e-08,6;UBERON:0001137,4.19e-08,6;UBERON:0002950,1.83e-07,4;UBERON:0001891,1.83e-07,4;UBERON:0009616,1.83e-07,4;UBERON:0010286,1.83e-07,4;UBERON:0001948,5.73e-07,5;UBERON:0002315,5.73e-07,5;UBERON:0000483,6.75e-07,174;UBERON:0001954,6.96e-07,7;UBERON:0003022,6.96e-07,7;UBERON:0002421,6.96e-07,7;UBERON:0000349,6.96e-07,7;UBERON:0002600,6.96e-07,7 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,16.5699118849139,10.5449367712546,15.1655321277941,9.09911740564856,5.75010257459886,0,0,0,0,0,0,0.606949382578793,2.11596391708813,1.90149421051854,0,0,0,0.988866362566974,0,9.28760342607055,34.9638657842615,0.829516898467821,0.270011876663381,0.841299845405528,3.71346279724945,7.50953039235486,1.71487118900936,2.01275489138296,0.919218786610021,19.82085857989,16.2162919368188,13.5173749265494,1.18697658957174,1.09785172322892,0.52091337055676,15.9134309430787,11.8180148106653,21.8501494320838,4.41942878210502,4.8406371471695,2.79599168737951,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0.376999773989026,0.247194967734374,1.87979163995885,0,0,0,0,0,4.68449275218475,3.35114730901528,0,0,0,0,12.8819949888148,6.8625090422794,2.1361239859187,9.03886464999838,7.67146371990992,12.6750707181332,10.3834408363365,0.509196819251581,0.373220911830279,0,1.05220927943237,0,0,0.360124259610698,0.30140963567143,0.0680364991513279,0.640568601424249,0.655912071918102,1.29351685369508,0.215567992932842,0,0,0,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,5.04695876553905,1.85228302282712,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0.325929952884052,0,0,0,0,0.390267295715598,0.472905432318573,0.44292937929755,1.2756381492599,0.81931657357869,1.03610989119537,1.3018415272336,0,0,0,0.827810238914197,7.06422595946285,8.90808818100744,0,0,0,0,0,0,0,0,0,0,0,20.2432429345738,0.567760340833074,0.534196811001766,1.95464351224291,0.659880491890142,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,1.06949213515416,0,0,0,1.70219802876894,0.18006109403131,0.905510786479282,0.857348140126369,0.709360934569094,1.78368817602071,1.31639216481697,1.2178597964584,0.23467170806371,0.42366414172764,0,0.49465875882444,0.322928853391811,0.180938774784468,0,0.164140899745061,0,5.93360966433631,0,2.27025554759545,1.66675074632741,0.188368457004691,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0.56369293868419,0,0,0,0.258319646955462,0.168956125490778,0.821500670520278,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0,0,1.36038230169127,0,0,0,0.19318959403219,0.563047426353546,0.549454872801795,0.214368379079066,0,3.95326289831947,7.36520378411483,9.73922372846974,5.499301834998,7.53590771747707,6.0431511791176,8.77529250301348,6.75481804836331,6.34399372577886,7.24864436452548,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.888986911206461,0.824140228955577,0,1.01078884705519,0,0.377252682772152,0.37456602987953,0.256100609619477,0.402048282689293,0,0.347652977834566,0.192909220463705,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,0.953744759789284,0.872078499793971,0.470546902076653,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,0,0.355905054372522,0.591026894253381,0.818462086339379,0.309873682371932,0.771626443924566,0.749431733813838,0.701794825336225,0.429742108096597,1.3390183244819,0.220591419119515,0.927471342481686 | |||
|short_description=p6@Ntrk2 | |||
}} |
Revision as of 05:19, 6 August 2015
Short description: | p6@Ntrk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ntrk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | 0bp_to_uc007quk.1_5end |
EntrezGene: | 18212 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.69e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.69e-14 | 23 |
neural cell | 3.47e-14 | 43 |
ectodermal cell | 1.06e-13 | 44 |
neurectodermal cell | 1.06e-13 | 44 |
oligodendrocyte precursor cell | 1.09e-09 | 8 |
neuron | 1.48e-08 | 33 |
neuronal stem cell | 1.48e-08 | 33 |
neuroblast | 1.48e-08 | 33 |
electrically signaling cell | 1.48e-08 | 33 |
migratory neural crest cell | 1.93e-07 | 10 |
neuron associated cell | 1.93e-07 | 10 |
glial cell (sensu Vertebrata) | 1.93e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.93e-07 | 10 |
glial cell | 1.93e-07 | 10 |
glioblast | 1.93e-07 | 10 |
glioblast (sensu Vertebrata) | 1.93e-07 | 10 |
oligodendrocyte | 7.30e-07 | 6 |
macroglial cell | 7.30e-07 | 6 |
astrocyte | 7.30e-07 | 6 |