FFCP PHASE1:Hg19::chr16:25123041..25123088,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51451 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17557 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UIC8 | |||
|association_with_transcript=0bp_to_ENST00000380966,ENST00000399069,NM_001032391,NM_016309,uc002dnw.1,uc002dnx.1,uc002dny.1,uc002dnz.1,uc002doa.1_5end | |||
|cluster_id=chr16:25123041..25123088,+ | |||
|description=CAGE_peak_1_at_LCMT1_5end | |||
|id=chr16:25123041..25123088,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.13e-15!180;CL:0000183!2.73e-11!59;CL:0000393!3.59e-10!60;CL:0000211!3.59e-10!60;CL:0000187!1.68e-09!54;CL:0000680!1.90e-09!57;CL:0000056!1.90e-09!57;CL:0000355!1.90e-09!57;CL:0000222!3.73e-09!119;CL:0000192!2.16e-08!42;CL:0000514!2.16e-08!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.20e-10,61;CL:0000211,4.20e-10,61;CL:0000187,1.98e-09,55;CL:0000680,2.21e-09,58;CL:0000056,2.21e-09,58;CL:0000355,2.21e-09,58;CL:0000222,3.14e-09,121;CL:0000192,2.63e-08,43;CL:0000514,2.63e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.06e-23!86;UBERON:0002616!1.91e-23!59;UBERON:0003075!1.05e-22!86;UBERON:0007284!1.05e-22!86;UBERON:0001017!1.47e-22!82;UBERON:0001049!1.49e-22!57;UBERON:0005068!1.49e-22!57;UBERON:0006241!1.49e-22!57;UBERON:0007135!1.49e-22!57;UBERON:0002346!3.03e-22!90;UBERON:0000073!4.57e-22!94;UBERON:0001016!4.57e-22!94;UBERON:0000955!1.89e-20!69;UBERON:0006238!1.89e-20!69;UBERON:0003056!1.85e-18!61;UBERON:0000475!3.25e-18!365;UBERON:0000119!4.18e-18!312;UBERON:0002780!5.46e-18!41;UBERON:0001890!5.46e-18!41;UBERON:0006240!5.46e-18!41;UBERON:0003080!1.09e-17!42;UBERON:0000483!1.99e-17!309;UBERON:0001893!1.74e-16!34;UBERON:0002020!4.75e-16!34;UBERON:0003528!4.75e-16!34;UBERON:0001869!5.44e-16!32;UBERON:0002791!7.77e-16!33;UBERON:0004121!8.74e-15!169;UBERON:0000924!8.91e-15!173;UBERON:0006601!8.91e-15!173;UBERON:0000481!1.05e-13!347;UBERON:0000033!1.32e-13!123;UBERON:0000025!5.35e-13!194;UBERON:0000956!1.23e-12!25;UBERON:0000203!1.23e-12!25;UBERON:0000153!2.40e-12!129;UBERON:0007811!2.40e-12!129;UBERON:0004290!4.67e-12!70;UBERON:0000064!1.10e-11!219;UBERON:0002619!1.37e-11!22;UBERON:0000914!1.75e-11!83;UBERON:0002329!1.75e-11!83;UBERON:0003077!1.75e-11!83;UBERON:0003059!1.75e-11!83;UBERON:0007282!1.75e-11!83;UBERON:0009618!1.75e-11!83;UBERON:0007285!1.75e-11!83;UBERON:0001950!4.33e-11!20;UBERON:0000477!1.49e-10!286;UBERON:0001134!7.31e-10!61;UBERON:0002036!7.31e-10!61;UBERON:0003082!7.31e-10!61;UBERON:0002385!5.29e-09!63;UBERON:0001015!5.29e-09!63;UBERON:0000383!5.29e-09!63;UBERON:0000486!8.57e-09!82;UBERON:0004111!1.26e-08!241;UBERON:0007023!2.53e-07!115;UBERON:0005256!6.92e-07!143;UBERON:0000468!8.08e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.81e-14;34!UBERON:0001869;2.30e-14;32!UBERON:0002791;5.57e-14;32!UBERON:0003528;6.87e-14;34!UBERON:0002020;6.87e-14;34!UBERON:0000073;1.90e-13;53!UBERON:0002616;1.90e-13;53!UBERON:0002780;7.95e-13;41!UBERON:0001890;7.95e-13;41!UBERON:0000956;1.32e-12;25!UBERON:0000203;1.32e-12;25!UBERON:0002619;1.29e-11;22!UBERON:0001950;4.25e-11;20!UBERON:0000955;5.18e-10;68!UBERON:0001017;1.78e-09;75!UBERON:0001016;1.63e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,1.82e-23,82;UBERON:0007284,1.82e-23,82;UBERON:0002346,6.06e-23,86;UBERON:0001049,7.76e-23,56;UBERON:0005068,7.76e-23,56;UBERON:0006241,7.76e-23,56;UBERON:0007135,7.76e-23,56;UBERON:0001017,9.78e-23,81;UBERON:0000073,1.06e-22,53;UBERON:0002616,1.06e-22,53;UBERON:0001016,4.50e-21,89;UBERON:0010314,8.66e-21,132;UBERON:0000955,1.21e-20,68;UBERON:0006238,1.21e-20,68;UBERON:0010371,8.90e-20,104;UBERON:0003056,5.73e-19,61;UBERON:0000119,1.92e-18,309;UBERON:0002780,5.46e-18,41;UBERON:0001890,5.46e-18,41;UBERON:0003080,5.46e-18,41;UBERON:0006240,5.46e-18,41;UBERON:0000483,9.28e-18,306;UBERON:0001893,1.74e-16,34;UBERON:0003528,4.75e-16,34;UBERON:0002020,4.75e-16,34;UBERON:0001869,5.44e-16,32;UBERON:0002791,1.84e-15,32;UBERON:0004121,2.67e-15,171;UBERON:0000924,2.67e-15,171;UBERON:0006601,2.67e-15,171;UBERON:0000025,5.15e-13,192;UBERON:0007503,8.07e-13,78;UBERON:0000956,1.23e-12,25;UBERON:0000203,1.23e-12,25;UBERON:0007524,1.27e-12,73;UBERON:0003077,1.74e-12,72;UBERON:0007285,1.74e-12,72;UBERON:0002329,5.49e-12,71;UBERON:0003059,5.49e-12,71;UBERON:0007282,5.49e-12,71;UBERON:0004290,5.49e-12,71;UBERON:0009618,5.49e-12,71;UBERON:0002619,1.37e-11,22;UBERON:0001950,4.33e-11,20;UBERON:0001134,8.45e-10,62;UBERON:0002036,8.45e-10,62;UBERON:0003082,8.45e-10,62;UBERON:0002385,5.94e-09,64;UBERON:0001015,5.94e-09,64;UBERON:0000383,5.94e-09,64;UBERON:0000486,9.16e-09,83;UBERON:0004111,9.93e-09,240;UBERON:0003104,5.48e-08,160;UBERON:0009142,5.48e-08,160;UBERON:0007023,4.96e-07,114 | |||
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| |||
|short_description=p1@LCMT1 | |||
}} |
Latest revision as of 19:30, 15 September 2015
Short description: | p1@LCMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LCMT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380966, ENST00000399069, NM_001032391, NM_016309, uc002dnw.1, uc002dnx.1, uc002dny.1, uc002dnz.1, uc002doa.1_5end |
EntrezGene: | LCMT1 |
HGNC: | 17557 |
UniProt: | Q9UIC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.20e-10 | 61 |
electrically active cell | 4.20e-10 | 61 |
muscle cell | 1.98e-09 | 55 |
muscle precursor cell | 2.21e-09 | 58 |
myoblast | 2.21e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.21e-09 | 58 |
mesodermal cell | 3.14e-09 | 121 |
smooth muscle cell | 2.63e-08 | 43 |
smooth muscle myoblast | 2.63e-08 | 43 |