FFCP PHASE1:Hg19::chr20:42875923..42875932,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=78997 | |EntrezGene=78997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4213 | |HGNC=4213 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7N4,B7Z1I3,E7ENJ1,Q96MZ0,Q5JY50 | |UniProt=F8W7N4,B7Z1I3,E7ENJ1,Q96MZ0,Q5JY50 | ||
|association_with_transcript=15bp_to_ENST00000262604,ENST00000372946,ENST00000372947,ENST00000545149,NM_024034,uc002xlp.1,uc002xlq.2,uc010zwl.1,uc010zwm.1,uc010zwn.1_5end | |association_with_transcript=15bp_to_ENST00000262604,ENST00000372946,ENST00000372947,ENST00000545149,NM_024034,uc002xlp.1,uc002xlq.2,uc010zwl.1,uc010zwm.1,uc010zwn.1_5end | ||
|cluster_id=chr20:42875923..42875932,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_GDAP1L1_5end | |description=CAGE_peak_3_at_GDAP1L1_5end | ||
|id=chr20:42875923..42875932,+ | |id=chr20:42875923..42875932,+ | ||
|ontology_enrichment_celltype=CL:0000540!9.69e-14!6;CL:0000031!9.69e-14!6;CL:0000404!9.69e-14!6;CL:0000047!4.28e-10!8;CL:0002322!5.85e-10!5 | |ontology_enrichment_celltype=CL:0000540!9.69e-14!6;CL:0000031!9.69e-14!6;CL:0000404!9.69e-14!6;CL:0000047!4.28e-10!8;CL:0002322!5.85e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0000540;6.78e-07;6!CL:0000404;6.78e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.08e-07,6;CL:0000031,6.08e-07,6;CL:0000404,6.08e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.57e-15;82!UBERON:0006215;4.26e-12;3!CL:0000031;6.78e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.05e-78!82;UBERON:0000073!2.69e-76!94;UBERON:0001016!2.69e-76!94;UBERON:0005743!3.46e-76!86;UBERON:0001049!2.74e-71!57;UBERON:0005068!2.74e-71!57;UBERON:0006241!2.74e-71!57;UBERON:0007135!2.74e-71!57;UBERON:0000955!4.23e-62!69;UBERON:0006238!4.23e-62!69;UBERON:0002616!5.50e-62!59;UBERON:0002780!1.17e-60!41;UBERON:0001890!1.17e-60!41;UBERON:0006240!1.17e-60!41;UBERON:0003080!5.42e-59!42;UBERON:0003075!1.37e-56!86;UBERON:0007284!1.37e-56!86;UBERON:0002346!1.90e-53!90;UBERON:0001869!7.26e-51!32;UBERON:0001893!7.81e-51!34;UBERON:0002020!9.64e-51!34;UBERON:0003528!9.64e-51!34;UBERON:0002791!1.23e-48!33;UBERON:0002619!7.86e-47!22;UBERON:0001950!6.80e-43!20;UBERON:0003056!2.45e-42!61;UBERON:0000956!1.28e-40!25;UBERON:0000203!1.28e-40!25;UBERON:0004121!6.04e-40!169;UBERON:0000924!1.21e-38!173;UBERON:0006601!1.21e-38!173;UBERON:0007023!5.00e-37!115;UBERON:0000033!2.48e-32!123;UBERON:0000153!3.31e-30!129;UBERON:0007811!3.31e-30!129;UBERON:0000025!2.84e-18!194;UBERON:0000200!5.90e-15!6;UBERON:0001871!1.49e-14!7;UBERON:0003076!2.10e-13!15;UBERON:0003057!2.10e-13!15;UBERON:0002021!9.22e-13!5;UBERON:0001872!2.05e-12!5;UBERON:0004111!4.21e-12!241;UBERON:0002420!6.26e-12!9;UBERON:0007245!6.26e-12!9;UBERON:0010009!6.26e-12!9;UBERON:0010011!6.26e-12!9;UBERON:0000454!6.26e-12!9;UBERON:0000349!6.52e-12!5;UBERON:0002308!1.56e-11!9;UBERON:0000125!1.56e-11!9;UBERON:0004733!4.32e-11!12;UBERON:0002028!4.32e-11!12;UBERON:0007277!4.32e-11!12;UBERON:0001894!5.88e-11!7;UBERON:0006222!5.88e-11!7;UBERON:0004732!4.04e-10!13;UBERON:0000483!2.40e-09!309;UBERON:0000119!3.97e-09!312;UBERON:0002680!6.52e-09!9;UBERON:0001895!6.52e-09!9;UBERON:0010092!6.52e-09!9;UBERON:0000477!8.25e-09!286;UBERON:0000064!9.14e-09!219;UBERON:0002771!3.02e-08!3;UBERON:0009663!5.07e-08!7;UBERON:0000988!1.43e-07!3;UBERON:0002298!7.43e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.16e-66;22!UBERON:0001950;9.95e-66;20!UBERON:0000956;9.67e-58;25!UBERON:0000203;9.67e-58;25!UBERON:0001869;3.17e-57;32!UBERON:0002791;8.71e-53;32!UBERON:0003528;1.34e-51;34!UBERON:0002020;1.34e-51;34!UBERON:0001893;2.46e-51;34!UBERON:0002780;8.76e-42;41!UBERON:0001890;8.76e-42;41!UBERON:0000073;1.08e-37;53!UBERON:0002616;1.08e-37;53!UBERON:0000955;1.43e-32;68!UBERON:0001017;2.70e-29;75!UBERON:0001016;5.54e-26;83!UBERON:0000200;1.50e-24;6!UBERON:0002021;1.88e-20;5!UBERON:0001871;2.97e-20;6!UBERON:0001872;8.68e-14;5!UBERON:0001870;6.60e-13;3!UBERON:0000349;8.32e-13;5!UBERON:0004733;6.13e-11;12!UBERON:0002028;6.13e-11;12!UBERON:0002420;8.77e-11;9!UBERON:0007245;8.77e-11;9!UBERON:0010009;8.77e-11;9!UBERON:0010011;8.77e-11;9!UBERON:0000454;8.77e-11;9!UBERON:0002680;1.66e-10;9!UBERON:0001895;1.66e-10;9!UBERON:0004732;4.73e-10;13!UBERON:0011216;6.69e-10;132!UBERON:0007023;1.14e-09;114!UBERON:0002771;2.97e-09;2!UBERON:0002702;2.97e-09;2!UBERON:0001876;5.80e-09;2!UBERON:0000125;4.83e-07;9!UBERON:0002308;4.83e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.46e-72,81;UBERON:0001016,4.17e-72,89;UBERON:0001049,1.71e-68,56;UBERON:0005068,1.71e-68,56;UBERON:0006241,1.71e-68,56;UBERON:0007135,1.71e-68,56;UBERON:0000073,3.27e-68,53;UBERON:0002616,3.27e-68,53;UBERON:0002619,3.57e-66,22;UBERON:0000955,5.79e-66,68;UBERON:0006238,5.79e-66,68;UBERON:0001950,6.50e-66,20;UBERON:0001869,6.49e-65,32;UBERON:0001893,7.43e-61,34;UBERON:0003528,1.64e-60,34;UBERON:0002020,1.64e-60,34;UBERON:0002791,2.63e-59,32;UBERON:0002780,1.47e-58,41;UBERON:0001890,1.47e-58,41;UBERON:0003080,1.47e-58,41;UBERON:0006240,1.47e-58,41;UBERON:0000956,5.97e-58,25;UBERON:0000203,5.97e-58,25;UBERON:0003075,1.81e-47,82;UBERON:0007284,1.81e-47,82;UBERON:0002346,6.49e-45,86;UBERON:0003056,1.29e-40,61;UBERON:0010371,7.91e-36,104;UBERON:0004121,9.85e-34,171;UBERON:0000924,9.85e-34,171;UBERON:0006601,9.85e-34,171;UBERON:0011216,1.02e-29,223;UBERON:0010314,2.02e-28,132;UBERON:0007023,4.82e-28,114;UBERON:0000200,2.17e-24,6;UBERON:0002021,1.21e-20,5;UBERON:0001871,2.05e-20,6;UBERON:0000025,4.40e-17,192;UBERON:0001872,1.33e-13,5;UBERON:0001870,6.75e-13,3;UBERON:0000349,7.14e-13,5;UBERON:0004111,4.43e-12,240;UBERON:0003076,1.18e-11,15;UBERON:0003057,1.18e-11,15;UBERON:0004733,5.29e-11,12;UBERON:0002028,5.29e-11,12;UBERON:0007277,5.29e-11,12;UBERON:0002420,9.46e-11,9;UBERON:0007245,9.46e-11,9;UBERON:0010009,9.46e-11,9;UBERON:0010011,9.46e-11,9;UBERON:0000454,9.46e-11,9;UBERON:0002680,1.32e-10,9;UBERON:0001895,1.32e-10,9;UBERON:0010092,1.32e-10,9;UBERON:0004732,4.14e-10,13;UBERON:0002771,2.86e-09,2;UBERON:0002702,2.98e-09,2;UBERON:0001876,4.66e-09,2;UBERON:0000483,1.69e-08,306;UBERON:0000119,2.44e-08,309;UBERON:0000125,5.98e-07,9;UBERON:0002308,5.98e-07,9 | |||
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|short_description=p3@GDAP1L1 | |short_description=p3@GDAP1L1 | ||
}} | }} |
Latest revision as of 07:48, 16 September 2015
Short description: | p3@GDAP1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GDAP1L1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 15bp_to_ENST00000262604, ENST00000372946, ENST00000372947, ENST00000545149, NM_024034, uc002xlp.1, uc002xlq.2, uc010zwl.1, uc010zwm.1, uc010zwn.1_5end |
EntrezGene: | GDAP1L1 |
HGNC: | 4213 |
UniProt: | F8W7N4B7Z1I3E7ENJ1Q96MZ0Q5JY50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.08e-07 | 6 |
neuroblast | 6.08e-07 | 6 |
electrically signaling cell | 6.08e-07 | 6 |