FFCP PHASE1:Hg19::chr17:56605368..56605379,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:56605368..56605379,-
|short_description=p10@SEPT4
|description=CAGE_peak_10_at_SEPT4_5end
|association_with_transcript=0bp_to_NR_037156_5end
|EntrezGene=...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5414 | |EntrezGene=5414 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9165 | |HGNC=9165 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_037156_5end | |||
|cluster_id=chr17:56605368..56605379,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_10_at_SEPT4_5end | |||
|id=chr17:56605368..56605379,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.50e-14;1!UBERON:0006601;2.69e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.78e-90!57;UBERON:0005068!1.78e-90!57;UBERON:0006241!1.78e-90!57;UBERON:0007135!1.78e-90!57;UBERON:0001017!3.24e-76!82;UBERON:0005743!2.03e-72!86;UBERON:0002616!4.97e-72!59;UBERON:0000955!2.80e-68!69;UBERON:0006238!2.80e-68!69;UBERON:0003075!2.62e-65!86;UBERON:0007284!2.62e-65!86;UBERON:0000073!5.09e-65!94;UBERON:0001016!5.09e-65!94;UBERON:0002020!4.70e-63!34;UBERON:0003528!4.70e-63!34;UBERON:0001893!5.32e-63!34;UBERON:0002780!2.41e-62!41;UBERON:0001890!2.41e-62!41;UBERON:0006240!2.41e-62!41;UBERON:0002346!4.05e-62!90;UBERON:0003080!9.15e-61!42;UBERON:0002791!5.35e-59!33;UBERON:0001869!1.06e-54!32;UBERON:0007023!9.78e-51!115;UBERON:0000033!9.92e-41!123;UBERON:0003056!1.99e-40!61;UBERON:0002619!1.51e-38!22;UBERON:0000153!1.56e-38!129;UBERON:0007811!1.56e-38!129;UBERON:0001950!1.51e-36!20;UBERON:0002308!1.61e-34!9;UBERON:0000125!1.61e-34!9;UBERON:0000956!9.70e-34!25;UBERON:0000203!9.70e-34!25;UBERON:0004121!1.98e-33!169;UBERON:0000924!1.69e-32!173;UBERON:0006601!1.69e-32!173;UBERON:0003076!7.84e-30!15;UBERON:0003057!7.84e-30!15;UBERON:0002420!3.06e-26!9;UBERON:0007245!3.06e-26!9;UBERON:0010009!3.06e-26!9;UBERON:0010011!3.06e-26!9;UBERON:0000454!3.06e-26!9;UBERON:0009663!3.63e-25!7;UBERON:0000025!6.70e-22!194;UBERON:0002298!1.11e-21!8;UBERON:0000200!3.77e-20!6;UBERON:0004733!9.65e-19!12;UBERON:0002028!9.65e-19!12;UBERON:0007277!9.65e-19!12;UBERON:0004732!3.13e-17!13;UBERON:0004111!3.04e-16!241;UBERON:0006331!4.02e-16!3;UBERON:0000988!1.39e-15!3;UBERON:0001871!3.77e-15!7;UBERON:0002771!4.48e-15!3;UBERON:0002240!1.22e-14!3;UBERON:0000477!1.32e-13!286;UBERON:0002680!2.86e-13!9;UBERON:0001895!2.86e-13!9;UBERON:0010092!2.86e-13!9;UBERON:0000483!5.24e-13!309;UBERON:0000119!8.23e-13!312;UBERON:0000369!1.19e-11!4;UBERON:0002435!1.19e-11!4;UBERON:0000204!1.19e-11!4;UBERON:0010082!1.19e-11!4;UBERON:0000475!1.24e-11!365;UBERON:0002148!2.72e-11!2;UBERON:0009662!2.72e-11!2;UBERON:0000064!3.98e-11!219;UBERON:0001875!4.96e-11!2;UBERON:0006514!4.96e-11!2;UBERON:0002360!6.37e-10!2;UBERON:0000094!6.37e-10!2;UBERON:0007645!6.37e-10!2;UBERON:0002021!1.19e-09!5;UBERON:0000349!1.54e-09!5;UBERON:0001872!2.82e-09!5;UBERON:0005174!5.55e-09!5;UBERON:0001137!5.55e-09!5;UBERON:0000062!4.65e-08!511;UBERON:0005383!2.49e-07!3;UBERON:0005382!2.49e-07!3;UBERON:0001896!3.02e-07!3;UBERON:0005290!3.02e-07!3;UBERON:0010096!3.02e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;9.67e-37;9!UBERON:0002308;9.67e-37;9!UBERON:0002780;3.41e-32;41!UBERON:0001890;3.41e-32;41!UBERON:0001893;5.97e-32;34!UBERON:0003528;4.26e-31;34!UBERON:0002020;4.26e-31;34!UBERON:0002791;2.07e-28;32!UBERON:0000073;1.05e-27;53!UBERON:0002616;1.05e-27;53!UBERON:0002148;2.73e-27;2!UBERON:0006331;2.73e-27;2!UBERON:0009662;2.73e-27;2!UBERON:0002021;2.56e-24;5!UBERON:0001950;2.76e-22;20!UBERON:0001869;4.55e-22;32!UBERON:0002619;2.48e-20;22!UBERON:0000988;1.48e-18;3!UBERON:0000956;5.80e-18;25!UBERON:0000203;5.80e-18;25!UBERON:0009663;8.78e-18;7!UBERON:0002336;5.80e-15;1!UBERON:0011215;5.80e-15;1!UBERON:0001018;5.80e-15;1!UBERON:0002473;5.80e-15;1!UBERON:0005340;5.80e-15;1!UBERON:0003544;5.80e-15;1!UBERON:0005970;5.80e-15;1!UBERON:0002316;5.80e-15;1!UBERON:0001020;5.80e-15;1!UBERON:0002437;5.80e-15;1!UBERON:0002902;1.50e-14;1!UBERON:0001882;1.50e-14;1!UBERON:0002038;1.50e-14;1!UBERON:0009661;1.50e-14;1!UBERON:0002950;1.50e-14;1!UBERON:0009899;1.50e-14;1!UBERON:0005403;1.50e-14;1!UBERON:0001891;1.50e-14;1!UBERON:0002420;5.64e-14;9!UBERON:0007245;5.64e-14;9!UBERON:0010009;5.64e-14;9!UBERON:0010011;5.64e-14;9!UBERON:0000454;5.64e-14;9!UBERON:0000955;2.60e-12;68!UBERON:0001016;8.69e-12;83!UBERON:0001017;2.01e-11;75!UBERON:0007023;1.26e-10;114!UBERON:0002298;9.25e-10;6!UBERON:0001894;1.32e-08;7!UBERON:0001875;3.56e-08;2!UBERON:0006514;3.56e-08;2!UBERON:0001897;3.95e-08;2!UBERON:0005162;3.95e-08;2!UBERON:0000122;3.95e-08;2!UBERON:0010225;3.95e-08;2!UBERON:0002702;6.35e-08;2!UBERON:0002680;8.58e-07;9!UBERON:0001895;8.58e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.64e-46,53;UBERON:0002616,1.64e-46,53;UBERON:0003528,3.24e-44,34;UBERON:0002020,3.24e-44,34;UBERON:0001049,5.34e-44,56;UBERON:0005068,5.34e-44,56;UBERON:0006241,5.34e-44,56;UBERON:0007135,5.34e-44,56;UBERON:0002780,5.52e-44,41;UBERON:0001890,5.52e-44,41;UBERON:0003080,5.52e-44,41;UBERON:0006240,5.52e-44,41;UBERON:0000955,5.80e-41,68;UBERON:0006238,5.80e-41,68;UBERON:0000125,4.28e-37,9;UBERON:0002308,4.28e-37,9;UBERON:0001893,1.44e-36,34;UBERON:0001017,2.42e-34,81;UBERON:0002791,2.40e-31,32;UBERON:0001016,7.51e-31,89;UBERON:0003075,8.30e-30,82;UBERON:0007284,8.30e-30,82;UBERON:0003056,2.04e-29,61;UBERON:0002346,2.25e-28,86;UBERON:0002148,1.60e-27,2;UBERON:0006331,1.60e-27,2;UBERON:0009662,1.60e-27,2;UBERON:0001869,9.81e-25,32;UBERON:0002021,4.67e-24,5;UBERON:0010371,2.84e-23,104;UBERON:0001950,4.50e-22,20;UBERON:0007023,2.45e-21,114;UBERON:0002619,3.87e-20,22;UBERON:0000988,1.04e-18,3;UBERON:0010314,4.55e-18,132;UBERON:0009663,5.89e-18,7;UBERON:0000956,8.59e-18,25;UBERON:0000203,8.59e-18,25;UBERON:0004121,1.26e-15,171;UBERON:0000924,1.26e-15,171;UBERON:0006601,1.26e-15,171;UBERON:0002336,5.42e-15,1;UBERON:0011215,5.42e-15,1;UBERON:0001018,5.42e-15,1;UBERON:0002473,5.42e-15,1;UBERON:0005340,5.42e-15,1;UBERON:0003544,5.42e-15,1;UBERON:0005970,5.42e-15,1;UBERON:0002316,5.42e-15,1;UBERON:0001020,5.42e-15,1;UBERON:0002437,5.42e-15,1;UBERON:0002038,8.17e-15,1;UBERON:0009661,8.17e-15,1;UBERON:0002950,8.17e-15,1;UBERON:0001891,8.17e-15,1;UBERON:0009616,8.17e-15,1;UBERON:0010286,8.17e-15,1;UBERON:0001882,1.07e-14,1;UBERON:0005403,1.07e-14,1;UBERON:0002902,1.61e-14,1;UBERON:0009899,1.61e-14,1;UBERON:0002420,4.14e-14,9;UBERON:0007245,4.14e-14,9;UBERON:0010009,4.14e-14,9;UBERON:0010011,4.14e-14,9;UBERON:0000454,4.14e-14,9;UBERON:0000025,5.67e-12,192;UBERON:0011216,1.32e-11,223;UBERON:0002298,7.76e-10,6;UBERON:0004111,2.91e-09,240;UBERON:0001894,1.09e-08,7;UBERON:0006222,1.09e-08,7;UBERON:0001875,3.56e-08,2;UBERON:0006514,3.56e-08,2;UBERON:0005162,3.82e-08,2;UBERON:0000122,3.82e-08,2;UBERON:0001897,4.09e-08,2;UBERON:0010225,4.09e-08,2;UBERON:0002702,9.19e-08,2;UBERON:0000483,6.72e-07,306;UBERON:0002680,7.64e-07,9;UBERON:0001895,7.64e-07,9;UBERON:0010092,7.64e-07,9;UBERON:0000119,8.16e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,1.11321717794222,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.331737779793674,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76344645220776,0,1.63985112007737,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.01191833562385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,1.45455861916959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,1.001527445652,0,0.443716206147409,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,1.41304295212211,0,1.11743701340006,1.02558182120378,0,1.24483054435592,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,0,0.206686796501184,1.20490039368423,0,0,0,0,0,0,0,0,0,0,0,0,0.543757863814654,0.986591603442736,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,1.57673541466596,0,1.35982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37895890482359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,1.11321717794222,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.331737779793674,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76344645220776,0,1.63985112007737,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696418755514666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,3.01191833562385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,1.45455861916959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,1.001527445652,0,0.443716206147409,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,1.41304295212211,0,1.11743701340006,1.02558182120378,0,1.24483054435592,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,0,0.206686796501184,1.20490039368423,0,0,0,0,0,0,0,0,0,0,0,0,0.543757863814654,0.986591603442736,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,1.57673541466596,0,1.35982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37895890482359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@SEPT4 | |||
}} | }} |
Latest revision as of 11:49, 16 September 2015
Short description: | p10@SEPT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SEPT4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_NR_037156_5end |
EntrezGene: | SEPT4 |
HGNC: | 9165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data