FFCP PHASE1:Hg19::chr12:113599241..113599257,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:113599241..113599257,- to FFCP PHASE1:Hg19::chr12:113599241..113599257,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79039 | |EntrezGene=79039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20084 | |HGNC=20084 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000551912_5end | |||
|cluster_id=chr12:113599241..113599257,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_2_at_DDX54_5end | |||
|id=chr12:113599241..113599257,- | |||
|ontology_enrichment_celltype=CL:0002322!7.88e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000785;2.04e-08;1!CL:0000819;2.04e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.04e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.72e-15;2!UBERON:0006601;2.32e-10;82!UBERON:0006222;1.90e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.04e-08;1!DOID:8675;2.04e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.04e-08,1;DOID:8675,2.04e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!7.41e-52!34;UBERON:0001869!1.72e-51!32;UBERON:0002780!1.54e-49!41;UBERON:0001890!1.54e-49!41;UBERON:0006240!1.54e-49!41;UBERON:0002791!2.47e-49!33;UBERON:0003080!3.42e-48!42;UBERON:0002020!6.45e-48!34;UBERON:0003528!6.45e-48!34;UBERON:0001049!1.54e-44!57;UBERON:0005068!1.54e-44!57;UBERON:0006241!1.54e-44!57;UBERON:0007135!1.54e-44!57;UBERON:0000955!6.31e-40!69;UBERON:0006238!6.31e-40!69;UBERON:0002616!6.36e-40!59;UBERON:0001017!5.19e-39!82;UBERON:0003056!3.14e-38!61;UBERON:0005743!9.19e-37!86;UBERON:0000073!1.99e-36!94;UBERON:0001016!1.99e-36!94;UBERON:0003075!1.28e-34!86;UBERON:0007284!1.28e-34!86;UBERON:0002619!5.43e-34!22;UBERON:0000956!4.26e-33!25;UBERON:0000203!4.26e-33!25;UBERON:0002346!1.19e-32!90;UBERON:0001950!7.54e-29!20;UBERON:0000033!3.59e-24!123;UBERON:0000153!5.83e-24!129;UBERON:0007811!5.83e-24!129;UBERON:0002420!1.99e-21!9;UBERON:0007245!1.99e-21!9;UBERON:0010009!1.99e-21!9;UBERON:0010011!1.99e-21!9;UBERON:0000454!1.99e-21!9;UBERON:0007023!4.10e-21!115;UBERON:0004121!3.46e-19!169;UBERON:0000924!1.68e-18!173;UBERON:0006601!1.68e-18!173;UBERON:0002308!3.15e-16!9;UBERON:0000125!3.15e-16!9;UBERON:0009663!4.52e-16!7;UBERON:0000349!1.28e-15!5;UBERON:0000369!2.51e-13!4;UBERON:0002435!2.51e-13!4;UBERON:0000204!2.51e-13!4;UBERON:0010082!2.51e-13!4;UBERON:0001871!3.07e-13!7;UBERON:0000200!1.83e-12!6;UBERON:0005383!1.97e-10!3;UBERON:0005382!1.97e-10!3;UBERON:0000025!3.88e-10!194;UBERON:0001872!8.72e-10!5;UBERON:0002771!1.04e-09!3;UBERON:0000064!7.68e-08!219;UBERON:0001873!1.76e-07!2;UBERON:0010122!1.76e-07!2;UBERON:0001954!2.78e-07!2;UBERON:0003022!2.78e-07!2;UBERON:0002421!2.78e-07!2;UBERON:0002600!2.78e-07!2;UBERON:0001875!2.86e-07!2;UBERON:0006514!2.86e-07!2;UBERON:0000477!3.04e-07!286;UBERON:0001876!4.10e-07!2;UBERON:0004111!4.26e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.65e-81;32!UBERON:0002791;5.90e-76;32!UBERON:0001893;5.73e-75;34!UBERON:0003528;6.32e-68;34!UBERON:0002020;6.32e-68;34!UBERON:0002780;2.26e-62;41!UBERON:0001890;2.26e-62;41!UBERON:0002619;1.83e-61;22!UBERON:0000956;4.80e-54;25!UBERON:0000203;4.80e-54;25!UBERON:0001950;2.64e-50;20!UBERON:0002420;6.51e-37;9!UBERON:0007245;6.51e-37;9!UBERON:0010009;6.51e-37;9!UBERON:0010011;6.51e-37;9!UBERON:0000454;6.51e-37;9!UBERON:0000073;1.11e-35;53!UBERON:0002616;1.11e-35;53!UBERON:0009663;3.95e-35;7!UBERON:0000369;2.22e-28;4!UBERON:0002435;2.22e-28;4!UBERON:0000204;2.22e-28;4!UBERON:0001017;1.29e-27;75!UBERON:0000955;1.97e-27;68!UBERON:0000125;3.15e-27;9!UBERON:0002308;3.15e-27;9!UBERON:0000200;9.39e-27;6!UBERON:0000349;2.51e-22;5!UBERON:0005383;8.81e-22;3!UBERON:0005382;8.81e-22;3!UBERON:0001016;1.45e-17;83!UBERON:0001871;1.87e-15;6!UBERON:0001873;4.72e-15;2!UBERON:0001954;1.24e-14;2!UBERON:0003022;1.24e-14;2!UBERON:0002421;1.24e-14;2!UBERON:0002600;1.24e-14;2!UBERON:0001875;1.80e-14;2!UBERON:0006514;1.80e-14;2!UBERON:0002771;6.44e-14;2!UBERON:0007023;7.31e-13;114!UBERON:0001872;2.16e-12;5!UBERON:0002021;3.14e-12;5!UBERON:0011216;8.52e-10;132!UBERON:0001870;9.17e-10;3!UBERON:0001874;1.77e-08;1!UBERON:0001882;2.35e-08;1!UBERON:0005403;2.35e-08;1!UBERON:0002022;3.00e-08;1!UBERON:0003112;4.40e-08;1!UBERON:0011158;4.40e-08;1!UBERON:0003128;4.40e-08;1!UBERON:0001703;4.40e-08;1!UBERON:0002241;4.40e-08;1!UBERON:0002581;8.40e-08;1!UBERON:0002902;8.40e-08;1!UBERON:0009899;8.40e-08;1!UBERON:0007190;8.40e-08;1!UBERON:0010314;5.70e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.40e-93,32;UBERON:0001893,5.27e-88,34;UBERON:0002780,2.07e-87,41;UBERON:0001890,2.07e-87,41;UBERON:0003080,2.07e-87,41;UBERON:0006240,2.07e-87,41;UBERON:0002791,3.13e-85,32;UBERON:0003528,3.87e-80,34;UBERON:0002020,3.87e-80,34;UBERON:0000073,4.90e-67,53;UBERON:0002616,4.90e-67,53;UBERON:0001049,2.79e-63,56;UBERON:0005068,2.79e-63,56;UBERON:0006241,2.79e-63,56;UBERON:0007135,2.79e-63,56;UBERON:0002619,1.68e-61,22;UBERON:0000955,4.92e-60,68;UBERON:0006238,4.92e-60,68;UBERON:0003056,7.90e-58,61;UBERON:0000956,4.46e-54,25;UBERON:0000203,4.46e-54,25;UBERON:0001017,5.17e-54,81;UBERON:0001950,2.39e-50,20;UBERON:0001016,2.80e-48,89;UBERON:0003075,4.30e-42,82;UBERON:0007284,4.30e-42,82;UBERON:0002346,5.91e-40,86;UBERON:0007023,3.99e-38,114;UBERON:0002420,5.14e-37,9;UBERON:0007245,5.14e-37,9;UBERON:0010009,5.14e-37,9;UBERON:0010011,5.14e-37,9;UBERON:0000454,5.14e-37,9;UBERON:0009663,2.87e-35,7;UBERON:0010371,2.40e-32,104;UBERON:0000369,2.00e-28,4;UBERON:0002435,2.00e-28,4;UBERON:0000204,2.00e-28,4;UBERON:0010082,2.00e-28,4;UBERON:0000125,2.46e-27,9;UBERON:0002308,2.46e-27,9;UBERON:0010314,5.78e-27,132;UBERON:0000200,5.90e-27,6;UBERON:0004121,2.59e-23,171;UBERON:0000924,2.59e-23,171;UBERON:0006601,2.59e-23,171;UBERON:0000349,2.58e-22,5;UBERON:0005383,8.52e-22,3;UBERON:0005382,8.52e-22,3;UBERON:0011216,2.56e-18,223;UBERON:0001871,1.44e-15,6;UBERON:0000025,1.55e-15,192;UBERON:0001873,4.56e-15,2;UBERON:0010122,4.56e-15,2;UBERON:0001954,1.28e-14,2;UBERON:0003022,1.28e-14,2;UBERON:0002421,1.28e-14,2;UBERON:0002600,1.28e-14,2;UBERON:0001875,1.37e-14,2;UBERON:0006514,1.37e-14,2;UBERON:0002771,4.32e-14,2;UBERON:0001872,2.44e-12,5;UBERON:0002021,2.97e-12,5;UBERON:0004111,1.59e-11,240;UBERON:0001870,9.81e-10,3;UBERON:0001874,1.77e-08,1;UBERON:0001882,2.19e-08,1;UBERON:0005403,2.19e-08,1;UBERON:0002022,3.34e-08,1;UBERON:0000483,4.73e-08,306;UBERON:0003112,5.05e-08,1;UBERON:0011158,5.05e-08,1;UBERON:0003128,5.05e-08,1;UBERON:0001703,5.05e-08,1;UBERON:0002241,5.05e-08,1;UBERON:0004761,5.05e-08,1;UBERON:0009617,5.05e-08,1;UBERON:0002581,6.19e-08,1;UBERON:0000119,6.27e-08,309;UBERON:0002902,7.10e-08,1;UBERON:0009899,7.10e-08,1;UBERON:0007190,9.29e-08,1 | |||
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| ||
|short_description=p2@DDX54 | |||
}} | }} |
Latest revision as of 12:11, 16 September 2015
Short description: | p2@DDX54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DDX54_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 3bp_to_ENST00000551912_5end |
EntrezGene: | DDX54 |
HGNC: | 20084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.04e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.04e-08 | 1 |
lymphosarcoma | 2.04e-08 | 1 |