FFCP PHASE1:Hg19::chr17:5973740..5973785,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:5973740..5973785,+
|short_description=p1@WSCD1
|description=CAGE_peak_1_at_WSCD1_5end
|association_with_transcript=-148bp_to_ENST00000317744,NM_015253,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23302 | |EntrezGene=23302 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29060 | |HGNC=29060 | ||
|TSSclassifier=strong | |||
|UniProt=Q658N2 | |UniProt=Q658N2 | ||
|association_with_transcript=-148bp_to_ENST00000317744,NM_015253,uc002gcn.2_5end | |||
|cluster_id=chr17:5973740..5973785,+ | |||
|description=CAGE_peak_1_at_WSCD1_5end | |||
|id=chr17:5973740..5973785,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.08e-15!24;CL:0000071!3.23e-15!18;CL:0002546!3.23e-15!18;CL:0000115!1.84e-14!35;CL:0002078!3.32e-13!44;CL:1000449!3.59e-09!16;CL:1000413!1.62e-08!9;CL:1000497!2.18e-08!18;CL:0002518!2.18e-08!18;CL:1000507!3.11e-08!12;CL:1000494!3.11e-08!12;CL:0000213!6.45e-08!57;CL:0000215!6.45e-08!57;CL:0002681!8.90e-07!13;CL:0002584!8.90e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000071;7.97e-21;18!CL:0002139;1.73e-20;24!CL:0000115;1.82e-18;36!CL:1000449;1.12e-15;15!CL:1000497;2.54e-13;17!CL:0002518;2.54e-13;17!CL:1000507;6.98e-13;10!CL:1000494;6.98e-13;10!CL:0002078;2.15e-12;45!CL:1000413;2.76e-12;9!CL:0002681;1.00e-11;12!CL:0002584;1.00e-11;12!CL:0002543;1.75e-09;6!CL:0002544;1.53e-08;6!CL:0000213;1.60e-07;58!CL:0000215;1.60e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,4.61e-21,18;CL:0002546,4.61e-21,18;CL:0000115,5.67e-21,36;CL:0002139,1.17e-20,24;CL:0002078,1.32e-19,45;CL:1000449,1.89e-15,15;CL:1000497,3.96e-13,17;CL:0002518,3.96e-13,17;CL:1000507,8.40e-13,10;CL:1000494,8.40e-13,10;CL:1000413,1.72e-12,9;CL:0002681,1.58e-11,12;CL:0002584,1.58e-11,12;CL:0000213,1.27e-10,58;CL:0000215,1.27e-10,58;CL:0002543,1.78e-09,6;CL:0002544,1.18e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.97e-21;18!UBERON:0006601;6.43e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.60e-39!86;UBERON:0001017!8.31e-38!82;UBERON:0001049!5.26e-36!57;UBERON:0005068!5.26e-36!57;UBERON:0006241!5.26e-36!57;UBERON:0007135!5.26e-36!57;UBERON:0000073!3.54e-34!94;UBERON:0001016!3.54e-34!94;UBERON:0000955!4.51e-31!69;UBERON:0006238!4.51e-31!69;UBERON:0003075!1.41e-30!86;UBERON:0007284!1.41e-30!86;UBERON:0002616!5.66e-30!59;UBERON:0000025!8.89e-29!194;UBERON:0002346!6.20e-28!90;UBERON:0007023!1.07e-26!115;UBERON:0003080!1.39e-25!42;UBERON:0004111!1.66e-25!241;UBERON:0002780!4.20e-25!41;UBERON:0001890!4.20e-25!41;UBERON:0006240!4.20e-25!41;UBERON:0000477!2.05e-24!286;UBERON:0000153!3.23e-24!129;UBERON:0007811!3.23e-24!129;UBERON:0000033!6.87e-24!123;UBERON:0003056!4.39e-22!61;UBERON:0000483!7.63e-21!309;UBERON:0000119!1.23e-20!312;UBERON:0002020!2.28e-20!34;UBERON:0003528!2.28e-20!34;UBERON:0001893!2.84e-20!34;UBERON:0002791!1.14e-19!33;UBERON:0004121!2.84e-19!169;UBERON:0001869!1.04e-18!32;UBERON:0000924!4.68e-18!173;UBERON:0006601!4.68e-18!173;UBERON:0001986!3.23e-15!18;UBERON:0004638!3.23e-15!18;UBERON:0004852!3.23e-15!18;UBERON:0000956!7.86e-15!25;UBERON:0000203!7.86e-15!25;UBERON:0000475!1.25e-13!365;UBERON:0000481!3.75e-13!347;UBERON:0002619!1.63e-12!22;UBERON:0000064!9.07e-12!219;UBERON:0001950!1.56e-11!20;UBERON:0003076!1.94e-11!15;UBERON:0003057!1.94e-11!15;UBERON:0000922!2.78e-11!612;UBERON:0000487!5.50e-11!22;UBERON:0000468!1.79e-10!659;UBERON:0004732!6.65e-10!13;UBERON:0000467!8.65e-10!625;UBERON:0000480!1.15e-09!626;UBERON:0006555!1.60e-09!17;UBERON:0005103!1.60e-09!17;UBERON:0000083!1.60e-09!17;UBERON:0009201!1.60e-09!17;UBERON:0004819!1.60e-09!17;UBERON:0006553!1.60e-09!17;UBERON:0003074!1.60e-09!17;UBERON:0003060!1.60e-09!17;UBERON:0003887!2.93e-09!21;UBERON:0000923!2.95e-09!604;UBERON:0005291!2.95e-09!604;UBERON:0006598!2.95e-09!604;UBERON:0002532!2.95e-09!604;UBERON:0004211!3.59e-09!16;UBERON:0001285!3.59e-09!16;UBERON:0007684!3.59e-09!16;UBERON:0003220!3.59e-09!16;UBERON:0004208!3.59e-09!16;UBERON:0004733!3.68e-09!12;UBERON:0002028!3.68e-09!12;UBERON:0007277!3.68e-09!12;UBERON:0002050!3.88e-09!605;UBERON:0005423!3.88e-09!605;UBERON:0006914!8.97e-09!25;UBERON:0000080!1.15e-08!18;UBERON:0002120!1.15e-08!18;UBERON:0004875!1.15e-08!18;UBERON:0005721!1.15e-08!18;UBERON:0005754!1.15e-08!18;UBERON:0007297!1.15e-08!18;UBERON:0000489!1.49e-08!32;UBERON:0003915!1.62e-08!9;UBERON:0004700!1.62e-08!9;UBERON:0001917!1.62e-08!9;UBERON:0009773!3.11e-08!12;UBERON:0001231!3.11e-08!12;UBERON:0004810!3.11e-08!12;UBERON:0004876!3.72e-08!20;UBERON:0002113!8.83e-08!27;UBERON:0003918!8.83e-08!27;UBERON:0005095!8.83e-08!27;UBERON:0007687!8.83e-08!27;UBERON:0002298!4.04e-07!8;UBERON:0002680!4.66e-07!9;UBERON:0001895!4.66e-07!9;UBERON:0010092!4.66e-07!9;UBERON:0002308!5.00e-07!9;UBERON:0000125!5.00e-07!9;UBERON:0001225!8.90e-07!13;UBERON:0008987!8.90e-07!13 | |||
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| ||
|short_description=p1@WSCD1 | |||
}} | }} |
Latest revision as of 15:31, 16 September 2015
Short description: | p1@WSCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WSCD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -148bp_to_ENST00000317744, NM_015253, uc002gcn.2_5end |
EntrezGene: | WSCD1 |
HGNC: | 29060 |
UniProt: | Q658N2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 4.61e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.61e-21 | 18 |
endothelial cell | 5.67e-21 | 36 |
endothelial cell of vascular tree | 1.17e-20 | 24 |
meso-epithelial cell | 1.32e-19 | 45 |
epithelial cell of nephron | 1.89e-15 | 15 |
kidney cell | 3.96e-13 | 17 |
kidney epithelial cell | 3.96e-13 | 17 |
kidney tubule cell | 8.40e-13 | 10 |
nephron tubule epithelial cell | 8.40e-13 | 10 |
endothelial cell of artery | 1.72e-12 | 9 |
kidney cortical cell | 1.58e-11 | 12 |
renal cortical epithelial cell | 1.58e-11 | 12 |
lining cell | 1.27e-10 | 58 |
barrier cell | 1.27e-10 | 58 |
vein endothelial cell | 1.78e-09 | 6 |
aortic endothelial cell | 1.18e-08 | 6 |