FFCP PHASE1:Hg19::chr16:51185172..51185197,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:51185172..51185197,- to FFCP PHASE1:Hg19::chr16:51185172..51185197,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6299 | |EntrezGene=6299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10524 | |HGNC=10524 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCU5,Q9NSC2 | |UniProt=E9PCU5,Q9NSC2 | ||
|association_with_transcript=0bp_to_ENST00000457559,NM_002968,uc010cbv.2,uc010vgs.1_5end | |||
|cluster_id=chr16:51185172..51185197,- | |||
|description=CAGE_peak_1_at_SALL1_5end | |||
|id=chr16:51185172..51185197,- | |||
|ontology_enrichment_celltype=CL:0002319!2.50e-10!25;CL:0000055!8.66e-09!180;CL:0000243!6.75e-07!15;CL:0000125!6.75e-07!15;CL:0000030!6.75e-07!15;CL:0000339!6.75e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.98e-11;25!CL:1000507;4.44e-10;10!CL:1000494;4.44e-10;10!CL:0000243;1.46e-09;15!CL:0000125;1.46e-09;15!CL:0000095;4.01e-08;17!CL:0000128;1.29e-07;7!CL:0000126;1.29e-07;7!CL:0000127;1.29e-07;7!CL:1000497;7.14e-07;17!CL:0002518;7.14e-07;17!CL:1000449;7.82e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.80e-11,25;CL:1000507,4.77e-10,10;CL:1000494,4.77e-10,10;CL:0000243,1.18e-09,15;CL:0000125,1.18e-09,15;CL:0000030,1.18e-09,15;CL:0000339,1.18e-09,15;CL:0000095,3.35e-08,17;CL:0000123,3.35e-08,17;CL:0000128,9.92e-08,7;CL:0000126,9.92e-08,7;CL:0000127,9.92e-08,7;CL:0002453,9.92e-08,7;CL:1000497,8.09e-07,17;CL:0002518,8.09e-07,17;CL:1000449,8.65e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.20e-10;82!UBERON:0006238;3.43e-10;10!CL:0000339;1.46e-09;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.18e-45!82;UBERON:0005743!8.74e-43!86;UBERON:0000073!4.17e-39!94;UBERON:0001016!4.17e-39!94;UBERON:0000955!8.67e-38!69;UBERON:0006238!8.67e-38!69;UBERON:0001049!2.26e-36!57;UBERON:0005068!2.26e-36!57;UBERON:0006241!2.26e-36!57;UBERON:0007135!2.26e-36!57;UBERON:0002616!5.34e-31!59;UBERON:0002346!8.57e-29!90;UBERON:0002780!2.24e-28!41;UBERON:0001890!2.24e-28!41;UBERON:0006240!2.24e-28!41;UBERON:0003075!1.49e-27!86;UBERON:0007284!1.49e-27!86;UBERON:0003080!3.18e-27!42;UBERON:0000924!9.87e-25!173;UBERON:0006601!9.87e-25!173;UBERON:0001893!4.38e-24!34;UBERON:0002020!4.77e-24!34;UBERON:0003528!4.77e-24!34;UBERON:0004121!1.59e-23!169;UBERON:0002791!2.31e-23!33;UBERON:0000475!1.26e-22!365;UBERON:0001869!2.19e-22!32;UBERON:0000033!9.89e-21!123;UBERON:0003056!1.32e-20!61;UBERON:0000153!7.19e-20!129;UBERON:0007811!7.19e-20!129;UBERON:0007023!2.78e-19!115;UBERON:0000956!3.72e-18!25;UBERON:0000203!3.72e-18!25;UBERON:0000025!5.54e-18!194;UBERON:0000468!7.61e-17!659;UBERON:0000062!4.01e-16!511;UBERON:0002619!1.23e-15!22;UBERON:0000119!5.88e-15!312;UBERON:0000467!6.20e-15!625;UBERON:0000480!9.02e-15!626;UBERON:0000922!1.82e-14!612;UBERON:0001950!2.52e-14!20;UBERON:0000483!3.47e-14!309;UBERON:0004111!7.49e-13!241;UBERON:0002050!3.46e-12!605;UBERON:0005423!3.46e-12!605;UBERON:0000923!9.36e-12!604;UBERON:0005291!9.36e-12!604;UBERON:0006598!9.36e-12!604;UBERON:0002532!9.36e-12!604;UBERON:0000481!2.98e-11!347;UBERON:0000477!3.22e-10!286;UBERON:0003076!3.95e-10!15;UBERON:0003057!3.95e-10!15;UBERON:0000064!9.25e-10!219;UBERON:0004732!1.17e-08!13;UBERON:0004733!7.90e-08!12;UBERON:0002028!7.90e-08!12;UBERON:0007277!7.90e-08!12;UBERON:0000489!2.06e-07!32;UBERON:0002308!2.49e-07!9;UBERON:0000125!2.49e-07!9;UBERON:0002420!7.30e-07!9;UBERON:0007245!7.30e-07!9;UBERON:0010009!7.30e-07!9;UBERON:0010011!7.30e-07!9;UBERON:0000454!7.30e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.24e-28;34!UBERON:0002780;4.68e-28;41!UBERON:0001890;4.68e-28;41!UBERON:0003528;4.95e-28;34!UBERON:0002020;4.95e-28;34!UBERON:0002791;8.07e-28;32!UBERON:0001869;1.05e-27;32!UBERON:0000073;1.77e-25;53!UBERON:0002616;1.77e-25;53!UBERON:0000956;1.47e-24;25!UBERON:0000203;1.47e-24;25!UBERON:0000955;2.54e-21;68!UBERON:0002619;4.65e-21;22!UBERON:0001017;1.31e-20;75!UBERON:0001950;3.11e-19;20!UBERON:0001016;1.11e-18;83!UBERON:0004211;4.44e-10;10!UBERON:0009773;4.44e-10;10!UBERON:0001231;4.44e-10;10!UBERON:0004810;4.44e-10;10!UBERON:0000125;1.38e-09;9!UBERON:0002308;1.38e-09;9!UBERON:0000489;1.40e-09;29!UBERON:0004732;6.99e-09;13!UBERON:0002420;7.74e-09;9!UBERON:0007245;7.74e-09;9!UBERON:0010009;7.74e-09;9!UBERON:0010011;7.74e-09;9!UBERON:0000454;7.74e-09;9!UBERON:0002113;3.68e-08;24!UBERON:0011143;3.68e-08;24!UBERON:0002298;5.22e-08;6!UBERON:0004733;8.35e-08;12!UBERON:0002028;8.35e-08;12!UBERON:0009663;1.66e-07;7!UBERON:0001894;2.21e-07;7!UBERON:0001871;3.64e-07;6!UBERON:0006555;7.82e-07;15!UBERON:0004819;7.82e-07;15!UBERON:0001285;7.82e-07;15!UBERON:0007684;7.82e-07;15 | |||
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| ||
|short_description=p1@SALL1 | |||
}} | }} |
Latest revision as of 21:35, 16 September 2015
Short description: | p1@SALL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SALL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457559, NM_002968, uc010cbv.2, uc010vgs.1_5end |
EntrezGene: | SALL1 |
HGNC: | 10524 |
UniProt: | E9PCU5Q9NSC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.80e-11 | 25 |
kidney tubule cell | 4.77e-10 | 10 |
nephron tubule epithelial cell | 4.77e-10 | 10 |
glial cell (sensu Vertebrata) | 1.18e-09 | 15 |
glial cell | 1.18e-09 | 15 |
glioblast | 1.18e-09 | 15 |
glioblast (sensu Vertebrata) | 1.18e-09 | 15 |
neuron associated cell | 3.35e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 3.35e-08 | 17 |
oligodendrocyte | 9.92e-08 | 7 |
macroglial cell | 9.92e-08 | 7 |
astrocyte | 9.92e-08 | 7 |
oligodendrocyte precursor cell | 9.92e-08 | 7 |
kidney cell | 8.09e-07 | 17 |
kidney epithelial cell | 8.09e-07 | 17 |
epithelial cell of nephron | 8.65e-07 | 15 |