FFCP PHASE1:Hg19::chr11:16759983..16760029,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |||
|TSSclassifier=strong | |||
|UniProt=E9PQ78 | |||
|association_with_transcript=160bp_to_ENST00000524520,ENST00000530378,uc001mmh.1_5end | |||
|cluster_id=chr11:16759983..16760029,- | |||
|description=CAGE_peak_2_at_SOX6_5end | |||
|id=chr11:16759983..16760029,- | |||
|ontology_enrichment_celltype=CL:0000738!9.88e-33!140;CL:0000988!1.95e-28!182;CL:0000037!1.22e-27!172;CL:0000566!1.22e-27!172;CL:0002031!3.71e-27!124;CL:0002087!3.01e-25!119;CL:0002032!5.43e-25!165;CL:0000837!5.43e-25!165;CL:0000838!1.42e-16!52;CL:0000542!3.73e-16!53;CL:0000051!3.73e-16!53;CL:0000766!1.28e-13!76;CL:0000860!2.19e-12!45;CL:0002057!1.07e-11!42;CL:0000791!2.41e-11!18;CL:0000789!2.41e-11!18;CL:0002420!2.41e-11!18;CL:0002419!2.41e-11!18;CL:0000790!2.41e-11!18;CL:0000839!8.72e-11!70;CL:0000763!1.81e-10!112;CL:0000049!1.81e-10!112;CL:0000557!2.09e-10!71;CL:0002009!4.48e-10!65;CL:0002194!1.76e-09!63;CL:0000576!1.76e-09!63;CL:0000040!1.76e-09!63;CL:0000559!1.76e-09!63;CL:0000084!1.56e-08!25;CL:0000827!1.56e-08!25;CL:0000625!6.01e-08!11;CL:0000945!1.23e-07!24;CL:0000826!1.23e-07!24;CL:0000236!3.68e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.87e-15;18!CL:0000789;1.87e-15;18!CL:0002419;1.87e-15;18!CL:0000542;2.85e-13;53!CL:0000236;9.15e-12;13!CL:0000084;2.34e-11;25!CL:0000625;4.27e-11;11!CL:0000945;8.57e-10;24!CL:0002087;1.21e-09;104!CL:0000738;2.34e-08;136!CL:0000576;3.52e-08;48!CL:0000860;2.16e-07;33!CL:0002057;2.16e-07;33!CL:0000094;2.18e-07;8!CL:0000624;2.58e-07;6!CL:0000766;2.61e-07;69!CL:0002393;3.17e-07;6!CL:0002397;3.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.72e-39,136;CL:0002031,3.84e-32,120;CL:0002087,1.75e-30,115;CL:0000988,2.99e-30,177;CL:0000037,1.44e-28,168;CL:0002032,2.08e-25,161;CL:0000837,2.08e-25,161;CL:0000838,1.26e-22,52;CL:0000542,6.95e-22,53;CL:0000051,6.95e-22,53;CL:0000791,1.14e-15,18;CL:0000789,1.14e-15,18;CL:0002420,1.14e-15,18;CL:0002419,1.14e-15,18;CL:0000790,1.14e-15,18;CL:0000766,1.04e-14,72;CL:0000860,2.07e-13,42;CL:0002057,2.07e-13,42;CL:0000473,3.44e-12,48;CL:0000234,3.44e-12,48;CL:0000625,2.65e-11,11;CL:0000084,2.94e-11,25;CL:0000827,2.94e-11,25;CL:0000557,8.60e-11,67;CL:0002009,1.53e-10,61;CL:0000236,1.67e-10,14;CL:0000839,2.20e-10,66;CL:0000945,5.07e-10,24;CL:0000826,5.07e-10,24;CL:0002194,9.98e-10,59;CL:0000576,9.98e-10,59;CL:0000040,9.98e-10,59;CL:0000559,9.98e-10,59;CL:0000763,6.02e-08,108;CL:0000049,6.02e-08,108;CL:0002393,1.71e-07,9;CL:0002397,1.71e-07,9;CL:0000094,1.86e-07,8;CL:0000624,2.45e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.87e-15;18!CL:0000051;2.85e-13;53!CL:0002057;1.35e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.78e-12!57;UBERON:0005068!1.78e-12!57;UBERON:0006241!1.78e-12!57;UBERON:0007135!1.78e-12!57;UBERON:0002616!2.26e-10!59;UBERON:0002193!1.28e-09!112;UBERON:0002780!3.31e-09!41;UBERON:0001890!3.31e-09!41;UBERON:0006240!3.31e-09!41;UBERON:0002390!6.99e-09!102;UBERON:0003061!6.99e-09!102;UBERON:0001017!8.94e-09!82;UBERON:0002371!9.17e-09!80;UBERON:0003080!1.67e-08!42;UBERON:0002405!2.44e-08!115;UBERON:0005743!2.80e-08!86;UBERON:0000955!4.81e-08!69;UBERON:0006238!4.81e-08!69;UBERON:0000073!1.01e-07!94;UBERON:0001016!1.01e-07!94;UBERON:0001474!1.46e-07!86;UBERON:0002020!3.91e-07!34;UBERON:0003528!3.91e-07!34;UBERON:0001893!5.06e-07!34;UBERON:0002791!9.39e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.77e-09;53!UBERON:0002616;1.77e-09;53!UBERON:0002780;7.41e-08;41!UBERON:0001890;7.41e-08;41!UBERON:0004732;1.83e-07;13!UBERON:0004733;4.41e-07;12!UBERON:0002028;4.41e-07;12!UBERON:0001869;5.93e-07;32!UBERON:0003528;8.27e-07;34!UBERON:0002020;8.27e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.17e-16,56;UBERON:0005068,1.17e-16,56;UBERON:0006241,1.17e-16,56;UBERON:0007135,1.17e-16,56;UBERON:0000073,2.89e-16,53;UBERON:0002616,2.89e-16,53;UBERON:0003075,4.09e-12,82;UBERON:0007284,4.09e-12,82;UBERON:0002780,7.10e-11,41;UBERON:0001890,7.10e-11,41;UBERON:0003080,7.10e-11,41;UBERON:0006240,7.10e-11,41;UBERON:0002346,7.31e-11,86;UBERON:0000955,7.42e-11,68;UBERON:0006238,7.42e-11,68;UBERON:0001017,3.41e-10,81;UBERON:0002371,1.43e-09,76;UBERON:0001016,7.33e-09,89;UBERON:0002390,9.64e-09,98;UBERON:0003061,9.64e-09,98;UBERON:0010371,1.73e-08,104;UBERON:0003056,2.60e-08,61;UBERON:0002405,3.28e-08,93;UBERON:0003528,3.48e-08,34;UBERON:0002020,3.48e-08,34;UBERON:0002193,4.66e-08,108;UBERON:0001893,4.92e-08,34;UBERON:0001474,5.58e-08,82;UBERON:0001869,5.78e-08,32;UBERON:0004732,1.29e-07,13;UBERON:0003076,2.38e-07,15;UBERON:0003057,2.38e-07,15;UBERON:0004733,3.51e-07,12;UBERON:0002028,3.51e-07,12;UBERON:0007277,3.51e-07,12;UBERON:0002791,3.76e-07,32 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0.783556884599516,0.491467873003018,0.697801167972428,0.655324116390517,0.263766978228454,0.247532705920093,0,0,0,0,0.487932798790507,1.23121058076788,1.42800483870977,1.25381888591235,1.14494394852423,1.36874425072884,1.75759695432724,1.91033514369878,1.31360943119913,1.81034797021462,5.90046415273356,4.60595277716655,2.47705797305722,0.919421224478927,0.90361775633475,0.369754010166788,0.46480320348181,0.568676929949686,2.64240395401362,6.09394949385065,5.61524452916397,8.68043482863407,0.895661896959697,0,1.54545340580512,1.01778767145695,1.13362783106643,0.727752183563449,1.16214518452842,1.6446715520873,1.23882548358041,3.16461631554365,2.56160706529101,1.89185783910868,0.689491361473237,0.645484683583826,0,1.31769637679823,1.63743690034707,0.449446968890169,1.22433556948361,1.92557416245656,1.91801137739712,1.31940520074686,0.398927315243264,0.426224750532694,0.870627715885752,0.56738522469114,3.11411124497787,1.00499466102697,1.5644487552606,2.17188844705117,2.42159801053347,1.84138817993782,3.79754864929061,2.95757400836718,4.67729459923096,4.19317291016752,2.47122988522289,2.10247649978109,2.57160938715328,2.56511469367124,0.99458338599545,2.73996230646951,3.51992488922645,4.91524750135918,6.22656477704488,5.9742231159311,6.80673177961221,4.02326707968138,3.96626923670917,3.81621501814146,1.1384259382189,4.69789751496751,4.96955196562797,1.32171328579026,2.24203425192614,0.790152254325231,5.70458333330116,6.28817220398664,5.14003747498773,1.00311897234407,7.49621213257258,4.73447805734733,0,1.11410456885174,2.94605907474837,2.65840673500345,2.16643091012012,0.768547918354051,1.30059347559878,0.986627427622057,1.10540007114339,1.73881851441031,4.59688345802387,2.67540828089713,1.04535523804977,0.906474741580529,5.74830740402882,1.37450978193052,2.27717722817553,2.86708872891687,3.25541726928209,5.70271226669025,3.16207750063323,3.96758494578697,3.74792179657038,1.65744076430812,6.56902397536837,6.45141578319144,8.02320587350522,6.22744936696036,0,0,0,0,0,0.434539556882471,0,0,1.03988298880475,1.10864698731282,0.351339142772504,4.45328856692223,0,1.48313777113772,0.649094787309367,0.174129737299267,0.531831842075461,3.57735936458013,3.43196946468077,6.68623502393217,1.19257444420023,1.72046919021225,0,0,0.838998872419812,0.825354125820202,0.417989933073621,0.258416759169329,1.77883131343355,0.66944122552934,0.805658634218294,0.760272105718513,0.488124115096339,0.367663080345869,0,0.535798369704479,0.22452937262617,0.337834441449967,0,0.949265659568129,0.549605231791222,1.31780417436063,3.87780264148325,0,0,0.633152558322899,0.529636723252875,1.43418310374407,0,0,0,0.49333509683432,0.933633106199299,0.538842688278752,0.490385709340376,0.756787138224657,0,0.70296429550139,0,1.71141546463335,0.298897361103602,0.23486899728753,0.485618833104395,0.702254033511242,0.408308342509787,0.245668634623536,0.309977343527296,1.18800285728205,0.247266929278557,0.910161361938026,0.718618141816238,0.168336113954066,1.00094815897571,0,0.438977620880838,0.919463387397059,0.300476117813194,0.113432183160021,0.179389635688862,0.427114777637135,0.423863802319124,0.300091096084402,0.618315175430633,0.257640540045629,0.744467425326359,0.337552664482532,0.487185025805993,0.252433774244115,0.460249493211497,1.2931684545505,0.710019185033229,0.302256294682921,0.169560592310488,0.193260853163297,1.09098448236334,0.286804595389004,0.975789649036763,0.662648841607426,0.232387885739037,0.725627385107593,0.252320850875628,1.09493207722749,0,0,1.38134921352481,0,0,0.236613600079688,0,0.241011029883482,0.882351781859152,0.217879444092406,0.71181185733329,0.269662616320329,0.392442930250692,0.769494313892781,1.4763109092493,1.40241773803446,0.8231480226628,1.47008711385542,1.26755034821831,0,0,1.7658523976586,2.21379189377604,0,0.219500570817251,0,0.201057944823262,0.185176890317059,0,1.03993478527958,0,0.231860809950154,0.234817388471643,1.01056513432752,0.925971025153221,0.570762456703795,3.1608175918371,4.29243081047436,0.492434012174795,0.234004265139238,0.148631162288728,0.93733833986777,0.503946384596579,1.13420077793909,0.179117045405697,0,0.766765358330422,0.985326475791887,0.44024217006613,1.4512968087854,3.747118788841,1.38866676769018,0.126995788584338,1.52795370223311,0,0,0.205654985406647,0,0.285826432630578,0.448524337381443,0.43596006883328,0.1466765716419,0,3.57656445851882,0,0.26593811658487,2.08014873822732,0.514414748524284,0,0.532844358032199,0,2.71310802695722,0,0.325736184293735,0,0,0.301439377059586,0,0.199945982364114,1.2162378064119,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0.723906533337896,0.61642896765115,0.895304816199478,0.672510863961164,7.68419964787516,4.09692392233083,6.03212270514817,0.254094624222463,1.30139853857622,1.54657762555539,0.837581326671744,0.637938751653163,1.49801404789436,5.9832291840805,2.07207756718018,0.36807447515742,0,0.271265023699736,0,0.356857977594324,0,0,0,0,1.034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| |||
|short_description=p2@SOX6 | |||
}} |
Latest revision as of 23:27, 16 September 2015
Short description: | p2@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SOX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 160bp_to_ENST00000524520, ENST00000530378, uc001mmh.1_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | E9PQ78 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data