FFCP PHASE1:Hg19::chr19:35521594..35521614,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6324 | |EntrezGene=6324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10586 | |HGNC=10586 | ||
|TSSclassifier=strong | |||
|UniProt=Q07699 | |UniProt=Q07699 | ||
|association_with_transcript=2bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | |association_with_transcript=2bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | ||
|cluster_id=chr19:35521594..35521614,+ | |||
|coexpression_cluster_id=C3776 | |||
|description=CAGE_peak_6_at_SCN1B_5end | |description=CAGE_peak_6_at_SCN1B_5end | ||
|id=chr19:35521594..35521614,+ | |id=chr19:35521594..35521614,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000669;9.78e-07;4 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.72e-10;3!UBERON:0006601;1.32e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.19e-25!115;UBERON:0001049!8.19e-21!57;UBERON:0005068!8.19e-21!57;UBERON:0006241!8.19e-21!57;UBERON:0007135!8.19e-21!57;UBERON:0003075!1.61e-18!86;UBERON:0007284!1.61e-18!86;UBERON:0002616!1.80e-18!59;UBERON:0000955!1.50e-17!69;UBERON:0006238!1.50e-17!69;UBERON:0005743!2.44e-17!86;UBERON:0002346!1.10e-16!90;UBERON:0001017!6.96e-16!82;UBERON:0002780!1.50e-15!41;UBERON:0001890!1.50e-15!41;UBERON:0006240!1.50e-15!41;UBERON:0003080!7.36e-15!42;UBERON:0000073!2.75e-14!94;UBERON:0001016!2.75e-14!94;UBERON:0004111!7.86e-14!241;UBERON:0001893!1.10e-13!34;UBERON:0000477!1.29e-13!286;UBERON:0000025!3.85e-13!194;UBERON:0002020!4.25e-13!34;UBERON:0003528!4.25e-13!34;UBERON:0002791!6.62e-13!33;UBERON:0000483!1.63e-12!309;UBERON:0001869!1.86e-12!32;UBERON:0000119!2.70e-12!312;UBERON:0000033!3.77e-12!123;UBERON:0003056!6.49e-12!61;UBERON:0000153!1.19e-11!129;UBERON:0007811!1.19e-11!129;UBERON:0001950!1.67e-10!20;UBERON:0002619!5.85e-09!22;UBERON:0000956!1.28e-08!25;UBERON:0000203!1.28e-08!25;UBERON:0000468!3.75e-08!659;UBERON:0004121!6.00e-08!169;UBERON:0000467!6.67e-08!625;UBERON:0000480!8.63e-08!626;UBERON:0000062!1.57e-07!511;UBERON:0000924!2.81e-07!173;UBERON:0006601!2.81e-07!173;UBERON:0000475!2.96e-07!365;UBERON:0003076!3.02e-07!15;UBERON:0003057!3.02e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!9.19e-25!115;UBERON:0001049!8.19e-21!57;UBERON:0005068!8.19e-21!57;UBERON:0006241!8.19e-21!57;UBERON:0007135!8.19e-21!57;UBERON:0003075!1.61e-18!86;UBERON:0007284!1.61e-18!86;UBERON:0002616!1.80e-18!59;UBERON:0000955!1.50e-17!69;UBERON:0006238!1.50e-17!69;UBERON:0005743!2.44e-17!86;UBERON:0002346!1.10e-16!90;UBERON:0001017!6.96e-16!82;UBERON:0002780!1.50e-15!41;UBERON:0001890!1.50e-15!41;UBERON:0006240!1.50e-15!41;UBERON:0003080!7.36e-15!42;UBERON:0000073!2.75e-14!94;UBERON:0001016!2.75e-14!94;UBERON:0004111!7.86e-14!241;UBERON:0001893!1.10e-13!34;UBERON:0000477!1.29e-13!286;UBERON:0000025!3.85e-13!194;UBERON:0002020!4.25e-13!34;UBERON:0003528!4.25e-13!34;UBERON:0002791!6.62e-13!33;UBERON:0000483!1.63e-12!309;UBERON:0001869!1.86e-12!32;UBERON:0000119!2.70e-12!312;UBERON:0000033!3.77e-12!123;UBERON:0003056!6.49e-12!61;UBERON:0000153!1.19e-11!129;UBERON:0007811!1.19e-11!129;UBERON:0001950!1.67e-10!20;UBERON:0002619!5.85e-09!22;UBERON:0000956!1.28e-08!25;UBERON:0000203!1.28e-08!25;UBERON:0000468!3.75e-08!659;UBERON:0004121!6.00e-08!169;UBERON:0000467!6.67e-08!625;UBERON:0000480!8.63e-08!626;UBERON:0000062!1.57e-07!511;UBERON:0000924!2.81e-07!173;UBERON:0006601!2.81e-07!173;UBERON:0000475!2.96e-07!365;UBERON:0003076!3.02e-07!15;UBERON:0003057!3.02e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.59e-24;20!UBERON:0001893;2.22e-22;34!UBERON:0002619;4.50e-22;22!UBERON:0000073;1.15e-20;53!UBERON:0002616;1.15e-20;53!UBERON:0001869;5.04e-20;32!UBERON:0002791;2.93e-19;32!UBERON:0000956;4.19e-19;25!UBERON:0000203;4.19e-19;25!UBERON:0002780;4.80e-19;41!UBERON:0001890;4.80e-19;41!UBERON:0003528;1.15e-18;34!UBERON:0002020;1.15e-18;34!UBERON:0000955;3.57e-13;68!UBERON:0000200;4.60e-12;6!UBERON:0004733;2.28e-11;12!UBERON:0002028;2.28e-11;12!UBERON:0001017;3.31e-11;75!UBERON:0004732;2.10e-10;13!UBERON:0001872;3.75e-10;5!UBERON:0002021;4.84e-10;5!UBERON:0001016;2.53e-09;83!UBERON:0007023;2.78e-09;114!UBERON:0001870;3.59e-09;3!UBERON:0002680;2.55e-08;9!UBERON:0001895;2.55e-08;9!UBERON:0002298;4.00e-08;6!UBERON:0007100;2.38e-07;25!UBERON:0005090;3.73e-07;2!UBERON:0001630;3.73e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.23e-38,53;UBERON:0002616,2.23e-38,53;UBERON:0001049,6.43e-36,56;UBERON:0005068,6.43e-36,56;UBERON:0006241,6.43e-36,56;UBERON:0007135,6.43e-36,56;UBERON:0000955,5.71e-30,68;UBERON:0006238,5.71e-30,68;UBERON:0002780,4.45e-28,41;UBERON:0001890,4.45e-28,41;UBERON:0003080,4.45e-28,41;UBERON:0006240,4.45e-28,41;UBERON:0003075,1.67e-27,82;UBERON:0007284,1.67e-27,82;UBERON:0007023,4.99e-27,114;UBERON:0010314,7.87e-26,132;UBERON:0002346,7.91e-26,86;UBERON:0001017,1.09e-25,81;UBERON:0001893,4.31e-25,34;UBERON:0001950,1.81e-24,20;UBERON:0003528,1.83e-22,34;UBERON:0002020,1.83e-22,34;UBERON:0001016,2.46e-22,89;UBERON:0002619,5.07e-22,22;UBERON:0001869,1.11e-21,32;UBERON:0010371,2.31e-21,104;UBERON:0002791,2.77e-21,32;UBERON:0000025,6.72e-21,192;UBERON:0000956,4.64e-19,25;UBERON:0000203,4.64e-19,25;UBERON:0003056,4.69e-17,61;UBERON:0004111,2.86e-16,240;UBERON:0000483,3.75e-14,306;UBERON:0000119,6.87e-14,309;UBERON:0000200,2.87e-12,6;UBERON:0004121,4.23e-12,171;UBERON:0000924,4.23e-12,171;UBERON:0006601,4.23e-12,171;UBERON:0004733,1.81e-11,12;UBERON:0002028,1.81e-11,12;UBERON:0007277,1.81e-11,12;UBERON:0004732,1.70e-10,13;UBERON:0001872,4.19e-10,5;UBERON:0002021,6.34e-10,5;UBERON:0001870,2.92e-09,3;UBERON:0003076,6.10e-09,15;UBERON:0003057,6.10e-09,15;UBERON:0002680,1.82e-08,9;UBERON:0001895,1.82e-08,9;UBERON:0010092,1.82e-08,9;UBERON:0007100,2.91e-08,27;UBERON:0002298,4.10e-08,6;UBERON:0011216,2.75e-07,223;UBERON:0005090,3.64e-07,2;UBERON:0001630,3.64e-07,2 | |||
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|short_description=p6@SCN1B | |short_description=p6@SCN1B | ||
}} | }} |
Latest revision as of 09:28, 17 September 2015
Short description: | p6@SCN1B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCN1B_5end |
Coexpression cluster: | C3776_skeletal_occipital_cerebellum_pons_left_postcentral_paracentral |
Association with transcript: | 2bp_to_ENST00000262631, ENST00000415950, NM_001037, NM_199037_5end |
EntrezGene: | SCN1B |
HGNC: | 10586 |
UniProt: | Q07699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data