FFCP PHASE1:Hg19::chr20:60795316..60795323,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11255 | |EntrezGene=11255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5184 | |HGNC=5184 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5N1 | |UniProt=Q9Y5N1 | ||
|association_with_transcript=0bp_to_ENST00000317393,ENST00000370797,NM_007232,uc002ycf.2,uc002ycg.2,uc002ych.2,uc002yci.2_5end | |association_with_transcript=0bp_to_ENST00000317393,ENST00000370797,NM_007232,uc002ycf.2,uc002ycg.2,uc002ych.2,uc002yci.2_5end | ||
|cluster_id=chr20:60795316..60795323,- | |||
|coexpression_cluster_id=C1482 | |||
|description=CAGE_peak_3_at_HRH3_5end | |description=CAGE_peak_3_at_HRH3_5end | ||
|id=chr20:60795316..60795323,- | |id=chr20:60795316..60795323,- | ||
|ontology_enrichment_celltype=CL:0002322!5.01e-08!5 | |ontology_enrichment_celltype=CL:0002322!5.01e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.30e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.52e-16;82!UBERON:0006215;3.42e-15;3!UBERON:0010122;1.08e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;9.52e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.36e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.41e-70!57;UBERON:0005068!2.41e-70!57;UBERON:0006241!2.41e-70!57;UBERON:0007135!2.41e-70!57;UBERON:0000073!2.42e-64!94;UBERON:0001016!2.42e-64!94;UBERON:0001017!5.04e-64!82;UBERON:0002616!6.24e-64!59;UBERON:0005743!3.98e-63!86;UBERON:0000955!8.79e-62!69;UBERON:0006238!8.79e-62!69;UBERON:0002780!3.92e-60!41;UBERON:0001890!3.92e-60!41;UBERON:0006240!3.92e-60!41;UBERON:0001893!1.96e-59!34;UBERON:0002020!2.29e-59!34;UBERON:0003528!2.29e-59!34;UBERON:0001869!3.71e-59!32;UBERON:0003080!1.64e-58!42;UBERON:0002791!6.29e-57!33;UBERON:0003075!2.74e-55!86;UBERON:0007284!2.74e-55!86;UBERON:0002346!1.01e-54!90;UBERON:0002619!4.30e-47!22;UBERON:0003056!5.57e-43!61;UBERON:0007023!1.39e-42!115;UBERON:0001950!1.87e-42!20;UBERON:0000956!5.98e-41!25;UBERON:0000203!5.98e-41!25;UBERON:0000033!7.54e-35!123;UBERON:0000153!2.44e-34!129;UBERON:0007811!2.44e-34!129;UBERON:0000924!1.39e-33!173;UBERON:0006601!1.39e-33!173;UBERON:0004121!3.17e-33!169;UBERON:0002420!8.93e-20!9;UBERON:0007245!8.93e-20!9;UBERON:0010009!8.93e-20!9;UBERON:0010011!8.93e-20!9;UBERON:0000454!8.93e-20!9;UBERON:0002308!1.01e-19!9;UBERON:0000125!1.01e-19!9;UBERON:0000200!3.50e-16!6;UBERON:0001871!9.12e-16!7;UBERON:0000025!1.04e-15!194;UBERON:0009663!4.17e-15!7;UBERON:0000349!1.09e-13!5;UBERON:0002021!2.00e-13!5;UBERON:0004733!4.21e-13!12;UBERON:0002028!4.21e-13!12;UBERON:0007277!4.21e-13!12;UBERON:0003076!5.06e-13!15;UBERON:0003057!5.06e-13!15;UBERON:0000369!1.16e-12!4;UBERON:0002435!1.16e-12!4;UBERON:0000204!1.16e-12!4;UBERON:0010082!1.16e-12!4;UBERON:0004732!5.58e-12!13;UBERON:0004111!3.37e-11!241;UBERON:0000483!1.37e-10!309;UBERON:0002680!2.09e-10!9;UBERON:0001895!2.09e-10!9;UBERON:0010092!2.09e-10!9;UBERON:0000119!2.29e-10!312;UBERON:0000064!4.73e-10!219;UBERON:0005383!6.22e-10!3;UBERON:0005382!6.22e-10!3;UBERON:0001872!2.36e-09!5;UBERON:0002771!8.13e-09!3;UBERON:0000475!8.44e-09!365;UBERON:0000988!1.62e-08!3;UBERON:0000477!2.29e-08!286;UBERON:0002298!5.96e-08!8;UBERON:0001873!3.67e-07!2;UBERON:0010122!3.67e-07!2;UBERON:0001897!4.75e-07!2;UBERON:0001875!8.36e-07!2;UBERON:0006514!8.36e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.56e-56;32!UBERON:0001893;1.85e-52;34!UBERON:0002791;7.24e-52;32!UBERON:0003528;6.92e-49;34!UBERON:0002020;6.92e-49;34!UBERON:0002780;2.46e-46;41!UBERON:0001890;2.46e-46;41!UBERON:0002619;2.38e-38;22!UBERON:0000073;1.66e-36;53!UBERON:0002616;1.66e-36;53!UBERON:0001950;1.89e-36;20!UBERON:0000956;1.41e-33;25!UBERON:0000203;1.41e-33;25!UBERON:0000955;6.75e-31;68!UBERON:0001017;2.07e-28;75!UBERON:0002420;3.28e-27;9!UBERON:0000125;3.28e-27;9!UBERON:0007245;3.28e-27;9!UBERON:0002308;3.28e-27;9!UBERON:0010009;3.28e-27;9!UBERON:0010011;3.28e-27;9!UBERON:0000454;3.28e-27;9!UBERON:0009663;1.99e-26;7!UBERON:0001016;6.44e-25;83!UBERON:0000369;1.43e-21;4!UBERON:0002435;1.43e-21;4!UBERON:0000204;1.43e-21;4!UBERON:0005383;1.15e-16;3!UBERON:0005382;1.15e-16;3!UBERON:0001872;7.29e-16;5!UBERON:0000200;2.02e-13;6!UBERON:0007023;3.59e-13;114!UBERON:0001873;1.08e-11;2!UBERON:0001897;1.67e-11;2!UBERON:0010225;1.67e-11;2!UBERON:0011216;3.33e-11;132!UBERON:0001875;3.98e-11;2!UBERON:0006514;3.98e-11;2!UBERON:0004733;8.04e-10;12!UBERON:0002028;8.04e-10;12!UBERON:0000349;2.17e-09;5!UBERON:0002021;2.58e-09;5!UBERON:0000013;3.30e-09;5!UBERON:0002410;3.30e-09;5!UBERON:0004732;4.78e-09;13!UBERON:0002680;9.41e-09;9!UBERON:0001895;9.41e-09;9!UBERON:0002037;7.78e-08;6!UBERON:0001870;1.44e-07;3!UBERON:0010314;1.73e-07;132!UBERON:0001894;2.78e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.14e-71,56;UBERON:0005068,1.14e-71,56;UBERON:0006241,1.14e-71,56;UBERON:0007135,1.14e-71,56;UBERON:0000073,1.03e-70,53;UBERON:0002616,1.03e-70,53;UBERON:0001016,2.12e-66,89;UBERON:0000955,7.59e-66,68;UBERON:0006238,7.59e-66,68;UBERON:0002780,6.88e-63,41;UBERON:0001890,6.88e-63,41;UBERON:0003080,6.88e-63,41;UBERON:0006240,6.88e-63,41;UBERON:0001017,4.73e-62,81;UBERON:0001869,2.67e-61,32;UBERON:0001893,1.61e-57,34;UBERON:0003528,2.22e-57,34;UBERON:0002020,2.22e-57,34;UBERON:0002791,2.07e-55,32;UBERON:0003075,8.65e-51,82;UBERON:0007284,8.65e-51,82;UBERON:0002346,3.76e-48,86;UBERON:0003056,1.18e-44,61;UBERON:0010371,1.45e-41,104;UBERON:0002619,2.85e-38,22;UBERON:0007023,1.47e-37,114;UBERON:0001950,1.96e-36,20;UBERON:0004121,8.97e-34,171;UBERON:0000924,8.97e-34,171;UBERON:0006601,8.97e-34,171;UBERON:0000956,1.66e-33,25;UBERON:0000203,1.66e-33,25;UBERON:0010314,2.44e-31,132;UBERON:0002420,3.56e-27,9;UBERON:0007245,3.56e-27,9;UBERON:0010009,3.56e-27,9;UBERON:0010011,3.56e-27,9;UBERON:0000454,3.56e-27,9;UBERON:0000125,4.00e-27,9;UBERON:0002308,4.00e-27,9;UBERON:0009663,2.38e-26,7;UBERON:0011216,3.90e-24,223;UBERON:0000369,1.40e-21,4;UBERON:0002435,1.40e-21,4;UBERON:0000204,1.40e-21,4;UBERON:0010082,1.40e-21,4;UBERON:0005383,1.18e-16,3;UBERON:0005382,1.18e-16,3;UBERON:0000025,1.38e-16,192;UBERON:0001872,6.37e-16,5;UBERON:0000200,2.80e-13,6;UBERON:0004111,5.45e-12,240;UBERON:0001873,1.14e-11,2;UBERON:0010122,1.14e-11,2;UBERON:0001897,1.81e-11,2;UBERON:0010225,1.81e-11,2;UBERON:0003076,4.95e-11,15;UBERON:0003057,4.95e-11,15;UBERON:0001875,5.00e-11,2;UBERON:0006514,5.00e-11,2;UBERON:0004733,8.70e-10,12;UBERON:0002028,8.70e-10,12;UBERON:0007277,8.70e-10,12;UBERON:0000483,9.72e-10,306;UBERON:0000119,1.40e-09,309;UBERON:0000349,2.30e-09,5;UBERON:0000013,2.82e-09,5;UBERON:0002410,2.82e-09,5;UBERON:0002021,2.90e-09,5;UBERON:0004732,5.14e-09,13;UBERON:0002680,8.67e-09,9;UBERON:0001895,8.67e-09,9;UBERON:0010092,8.67e-09,9;UBERON:0002037,6.91e-08,6;UBERON:0006215,6.91e-08,6;UBERON:0001870,1.30e-07,3;UBERON:0001894,2.87e-07,7;UBERON:0006222,2.87e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.54736358051564,0,0,9.07839254950372,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,1.94813006139888,0,0,0,0,0,0,0,0.344743373241465,0,0,5.31444831488303,14.9539583895506,1.52581736317083,1.76926815889959,3.54657142744257,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,5.3880822516828,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21587785845575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,2.19048606227189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0.321506296930038,0.550157746388935,0,0,0,3.03747783290123,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,1.45455861916959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.09823638411767,2.6290095448365,0,0.332787154610557,1.05563885000352,0,0,0,0,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53473245564382,1.83302179374359,0,2.18419276384028,0,0,0.123935764259002,0,0,0,0,0,0,5.90908870887428,1.41696576325585,0.957803154342908,1.23069818544453,0.252071696221718,3.8728061379962,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16120270778863,1.56215619722769,1.86018116851066,2.09272173639893,0,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,3.02554758389106,0,0,0.078493092850514,8.4842418554641,0,0,0,0,0.0714765441766563,3.63431306985271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,3.97901550322736,0,0,0.659643100472575,0,0,0.218559560503957,0,0,0,0,0,2.5359343655004,0,0,0,0,0,0,0,0,0,0,0,2.71965960763659,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,8.29169439458779,3.10298987585686,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.54736358051564,0,0,9.07839254950372,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,1.94813006139888,0,0,0,0,0,0,0,0.344743373241465,0,0,5.31444831488303,14.9539583895506,1.52581736317083,1.76926815889959,3.54657142744257,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,5.3880822516828,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21587785845575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,2.19048606227189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0.321506296930038,0.550157746388935,0,0,0,3.03747783290123,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904980694530854,1.45455861916959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.09823638411767,2.6290095448365,0,0.332787154610557,1.05563885000352,0,0,0,0,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53473245564382,1.83302179374359,0,2.18419276384028,0,0,0.123935764259002,0,0,0,0,0,0,5.90908870887428,1.41696576325585,0.957803154342908,1.23069818544453,0.252071696221718,3.8728061379962,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16120270778863,1.56215619722769,1.86018116851066,2.09272173639893,0,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,3.02554758389106,0,0,0.078493092850514,8.4842418554641,0,0,0,0,0.0714765441766563,3.63431306985271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0.233939463462106,3.97901550322736,0,0,0.659643100472575,0,0,0.218559560503957,0,0,0,0,0,2.5359343655004,0,0,0,0,0,0,0,0,0,0,0,2.71965960763659,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,8.29169439458779,3.10298987585686,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@HRH3 | |short_description=p3@HRH3 | ||
}} | }} |
Latest revision as of 10:11, 17 September 2015
Short description: | p3@HRH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HRH3_5end |
Coexpression cluster: | C1482_caudate_anaplastic_putamen_thalamus_small_diencephalon_nucleus |
Association with transcript: | 0bp_to_ENST00000317393, ENST00000370797, NM_007232, uc002ycf.2, uc002ycg.2, uc002ych.2, uc002yci.2_5end |
EntrezGene: | HRH3 |
HGNC: | 5184 |
UniProt: | Q9Y5N1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.36e-08 | 6 |